RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 LRRC69Q6ZNQ3 347 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 KIAA0825Q8IV33 1275 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 EPS8L3Q8TE67 593 aaKnown RBP4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 SH3TC2Q8TF17 1288 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 CPLX3Q8WVH0 158 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 ANAPC16Q96DE5 110 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 CCDC136Q96JN2 1154 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 NBPF4Q96M43 638 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 SLC4A9Q96Q91 983 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 OSBPL7Q9BZF2 842 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 KANSL2Q9H9L4 492 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 SCHIP1Q9P0W5 487 aaPredicted RBP4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 SIRPGQ9P1W8 387 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 HCN2Q9UL51 889 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 USP31Q70CQ4 1352 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 FAM221BA6H8Z2 402 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 MINDY4BA8MYZ0 360 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 NEFLP07196 543 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 MTFR1Q15390 333 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 ODR4Q5SWX8 454 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 C20orf204Q6ZNR8 217 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 ERMP1Q7Z2K6 904 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 STAG1Q8WVM7 1258 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 IFT43Q96FT9 208 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 MYO19Q96H55 970 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 ANKIB1Q9P2G1 1089 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 FAM8A1Q9UBU6 413 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 FOXD3Q9UJU5 478 aaPredicted RBP4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 TTF2Q9UNY4 1162 aaKnown RBP4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 HCN4Q9Y3Q4 1203 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 PRKAB1Q9Y478 270 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 USP3Q9Y6I4 520 aa4.5□□□□□ -1.69
HERPUD1-211ENST00000566550 ESYT3A0FGR9 886 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 AMPD3Q01432 767 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 TBC1D8BQ0IIM8 1120 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 SFSWAPQ12872 951 aaKnown RBP4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 RASA3Q14644 834 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 PLEKHG4Q58EX7 1191 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 TREML1Q86YW5 311 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 ALDH16A1Q8IZ83 802 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 FMR1NBQ8N0W7 255 aaPredicted RBP4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 PMM1Q92871 262 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 MKL1Q969V6 931 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 CCDC74AQ96AQ1 378 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 SEC16BQ96JE7 1060 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 SLC30A3Q99726 388 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 SSBP4Q9BWG4 385 aaPredicted RBP4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 UBE2OQ9C0C9 1292 aaKnown RBP4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 DNAJC25Q9H1X3 360 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 GGNBP2Q9H3C7 697 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 JPH1Q9HDC5 661 aaPredicted RBP4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 GINM1Q9NU53 330 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 MAGEC2Q9UBF1 373 aaPredicted RBP4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 RNF114Q9Y508 228 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 PARP3Q9Y6F1 533 aa4.49□□□□□ -1.69
HERPUD1-211ENST00000566550 SERTM1A2A2V5 107 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 GADD45BO75293 160 aaPredicted RBP4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 PDGFRBP09619 1106 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 HCLS1P14317 486 aaPredicted RBP4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 RAB33AQ14088 237 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 MAP3K11Q16584 847 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 C11orf91Q3C1V1 193 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 NXPE4Q6UWF7 544 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 SHISA2Q6UWI4 295 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 FERMT3Q86UX7 667 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 STAG2Q8N3U4 1231 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 DTWD1Q8N5C7 304 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 RASGRP4Q8TDF6 673 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 WFDC12Q8WWY7 111 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 APPBP2Q92624 585 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 L3MBTL2Q969R5 705 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 SGSM3Q96HU1 749 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 CEP63Q96MT8 703 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 CEP89Q96ST8 783 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 EFCC1Q9HA90 598 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 NPHS2Q9NP85 383 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 ADAMTS1Q9UHI8 967 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 KCNH4Q9UQ05 1017 aa4.48□□□□□ -1.69
HERPUD1-211ENST00000566550 RGS9O75916 674 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 TRIM37O94972 964 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 POLR3DP05423 398 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 CNGA1P29973 690 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 SSTR4P31391 388 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 GBP2P32456 591 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 NOS2P35228 1153 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 TXLNAP40222 546 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 IREB2P48200 963 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 ST13P50502 369 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 GYS2P54840 703 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 TBX4P57082 545 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 IFRD2Q12894 506 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 TEAD4Q15561 434 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 RTN1Q16799 776 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 TAF7LQ5H9L4 462 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 CCDC81Q6ZN84 652 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 PRR23CQ6ZRP0 262 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 HOMER1Q86YM7 354 aa4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 WDR75Q8IWA0 830 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-211ENST00000566550 CCAR1Q8IX12 1150 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms