RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 YEATS4O95619 227 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 ANO1Q5XXA6 986 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 TICAM2Q86XR7 235 aa16.53■□□□□ 0.24
CDH1-209ENST00000566510 ZNF215Q9UL58 517 aaPredicted RBP16.53■□□□□ 0.24
CDH1-209ENST00000566510 COL18A1P39060 1754 aa16.52■□□□□ 0.24
CDH1-209ENST00000566510 PFKFB1P16118 471 aa16.52■□□□□ 0.24
CDH1-209ENST00000566510 LMOD1P29536 600 aaPredicted RBP16.52■□□□□ 0.24
CDH1-209ENST00000566510 METTL24Q5JXM2 366 aa16.52■□□□□ 0.24
CDH1-209ENST00000566510 SYNE4Q8N205 404 aa16.52■□□□□ 0.24
CDH1-209ENST00000566510 CGNQ9P2M7 1197 aaKnown RBP16.52■□□□□ 0.24
CDH1-209ENST00000566510 KAT6BQ8WYB5 2073 aa16.52■□□□□ 0.23
CDH1-209ENST00000566510 TCIRG1Q13488 830 aa16.52■□□□□ 0.23
CDH1-209ENST00000566510 NYAP1Q6ZVC0 841 aa16.52■□□□□ 0.23
CDH1-209ENST00000566510 KIF18AQ8NI77 898 aa16.52■□□□□ 0.23
CDH1-209ENST00000566510 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
CDH1-209ENST00000566510 ERVV-2B6SEH9 535 aa16.51■□□□□ 0.23
CDH1-209ENST00000566510 IDH1O75874 414 aaKnown RBP16.51■□□□□ 0.23
CDH1-209ENST00000566510 SYCP1Q15431 976 aa16.51■□□□□ 0.23
CDH1-209ENST00000566510 SLC9C2Q5TAH2 1124 aa16.51■□□□□ 0.23
CDH1-209ENST00000566510 FBXL16Q8N461 479 aa16.51■□□□□ 0.23
CDH1-209ENST00000566510 NWD2Q9ULI1 1742 aa16.51■□□□□ 0.23
CDH1-209ENST00000566510 SFPQP23246 707 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDH1-209ENST00000566510 KIF23Q02241 960 aaPredicted RBP16.51■□□□□ 0.23
CDH1-209ENST00000566510 LDHAL6AQ6ZMR3 332 aa16.51■□□□□ 0.23
CDH1-209ENST00000566510 FEZ1Q99689 392 aa16.51■□□□□ 0.23
CDH1-209ENST00000566510 ALG1Q9BT22 464 aa16.51■□□□□ 0.23
CDH1-209ENST00000566510 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDH1-209ENST00000566510 TJP1Q07157 1748 aa16.51■□□□□ 0.23
CDH1-209ENST00000566510 GPTP24298 496 aa16.5■□□□□ 0.23
CDH1-209ENST00000566510 METAP2P50579 478 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDH1-209ENST00000566510 MICU3Q86XE3 530 aa16.5■□□□□ 0.23
CDH1-209ENST00000566510 PHKBQ93100 1093 aa16.5■□□□□ 0.23
CDH1-209ENST00000566510 MST1RQ04912 1400 aa16.5■□□□□ 0.23
CDH1-209ENST00000566510 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
CDH1-209ENST00000566510 WDHD1O75717 1129 aaPredicted RBP16.5■□□□□ 0.23
CDH1-209ENST00000566510 NLRP12P59046 1061 aa16.5■□□□□ 0.23
CDH1-209ENST00000566510 KIF6Q6ZMV9 814 aa16.5■□□□□ 0.23
CDH1-209ENST00000566510 STRN4Q9NRL3 753 aa16.5■□□□□ 0.23
CDH1-209ENST00000566510 MCAMP43121 646 aa16.49■□□□□ 0.23
CDH1-209ENST00000566510 SYKP43405 635 aa16.49■□□□□ 0.23
CDH1-209ENST00000566510 NFXL1Q6ZNB6 911 aa16.49■□□□□ 0.23
CDH1-209ENST00000566510 ISCA1Q9BUE6 129 aa16.49■□□□□ 0.23
CDH1-209ENST00000566510 CNNM1Q9NRU3 951 aa16.49■□□□□ 0.23
CDH1-209ENST00000566510 IMPACTQ9P2X3 320 aa16.49■□□□□ 0.23
CDH1-209ENST00000566510 NUP188Q5SRE5 1749 aa16.49■□□□□ 0.23
CDH1-209ENST00000566510 TNS3Q68CZ2 1445 aa16.49■□□□□ 0.23
CDH1-209ENST00000566510 CMA1P23946 247 aa16.49■□□□□ 0.23
CDH1-209ENST00000566510 OSBPL5Q9H0X9 879 aaPredicted RBP16.49■□□□□ 0.23
CDH1-209ENST00000566510 OGFRQ9NZT2 677 aa16.49■□□□□ 0.23
CDH1-209ENST00000566510 ANGEL1Q9UNK9 670 aaKnown RBP16.49■□□□□ 0.23
CDH1-209ENST00000566510 MROH7-TTC4A0A0A0MT08 1334 aa16.48■□□□□ 0.23
CDH1-209ENST00000566510 GLI3P10071 1580 aa16.48■□□□□ 0.23
CDH1-209ENST00000566510 SPEF2Q9C093 1822 aa16.48■□□□□ 0.23
CDH1-209ENST00000566510 NRDCO43847 1150 aa16.48■□□□□ 0.23
CDH1-209ENST00000566510 AXDND1Q5T1B0 1012 aaPredicted RBP16.48■□□□□ 0.23
CDH1-209ENST00000566510 ARMCX5Q6P1M9 558 aa16.48■□□□□ 0.23
CDH1-209ENST00000566510 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
CDH1-209ENST00000566510 B4E1Z4 1266 aa16.48■□□□□ 0.23
CDH1-209ENST00000566510 ATP1A3P13637 1013 aa16.48■□□□□ 0.23
CDH1-209ENST00000566510 CYB5R4Q7L1T6 521 aa16.48■□□□□ 0.23
CDH1-209ENST00000566510 SPATA31A3Q5VYP0 1347 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 SLC39A14Q15043 492 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 ELF2Q15723 593 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 E4F1Q66K89 784 aaPredicted RBP16.47■□□□□ 0.23
CDH1-209ENST00000566510 TBC1D10CQ8IV04 446 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 CCDC150Q8NCX0 1101 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 NKX2-3Q8TAU0 364 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 BPIFA3Q9BQP9 254 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 MYL10Q9BUA6 226 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 ADAMTSL3P82987 1691 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 NEDD4P46934 1319 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 SERPINC1P01008 464 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 ITGA6P23229 1130 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 FANCCQ00597 558 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 UTP14CQ5TAP6 766 aaKnown RBP16.47■□□□□ 0.23
CDH1-209ENST00000566510 KRT40Q6A162 431 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 CPLX2Q6PUV4 134 aaKnown RBP16.47■□□□□ 0.23
CDH1-209ENST00000566510 SYT10Q6XYQ8 523 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 CLIC6Q96NY7 704 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 GTPBP4Q9BZE4 634 aaKnown RBP16.47■□□□□ 0.23
CDH1-209ENST00000566510 SENP2Q9HC62 589 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 ABCC6O95255 1503 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 WDR17Q8IZU2 1322 aa16.47■□□□□ 0.23
CDH1-209ENST00000566510 IL2RBP14784 551 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 PNOCQ13519 176 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 TRIM29Q14134 588 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 CADPS2Q86UW7 1296 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 ZBTB38Q8NAP3 1195 aaPredicted RBP16.46■□□□□ 0.23
CDH1-209ENST00000566510 NBPF3Q9H094 633 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 GREM2Q9H772 168 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 INCENPQ9NQS7 918 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 TMOD3Q9NYL9 352 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 ZMYM6O95789 1325 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 PCCAP05165 728 aaPredicted RBP16.46■□□□□ 0.23
CDH1-209ENST00000566510 PTPN21Q16825 1174 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 PPP1R13BQ96KQ4 1090 aa16.46■□□□□ 0.23
CDH1-209ENST00000566510 CDKL5O76039 1030 aa16.45■□□□□ 0.22
CDH1-209ENST00000566510 SLU7O95391 586 aaKnown RBP16.45■□□□□ 0.22
CDH1-209ENST00000566510 CDC27P30260 824 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms