RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TAF1CQ15572 869 aaPredicted RBP6.45□□□□□ -1.38
LINC00561-201ENST00000565815 ZNF417Q8TAU3 575 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 SLC7A3Q8WY07 619 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 ZNF587Q96SQ5 575 aaPredicted RBP6.45□□□□□ -1.38
LINC00561-201ENST00000565815 BHLHE41Q9C0J9 482 aaPredicted RBP6.45□□□□□ -1.38
LINC00561-201ENST00000565815 C11orf16Q9NQ32 467 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 USP31Q70CQ4 1352 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 PTPRMP28827 1452 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 ELOA3CA0A087WX78 387 aaPredicted RBP6.45□□□□□ -1.38
LINC00561-201ENST00000565815 ELOA3DA6NLF2 546 aaPredicted RBP6.45□□□□□ -1.38
LINC00561-201ENST00000565815 BAG6P46379 1132 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 ELOA3BQ3SY89 546 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 ELOA3Q8NG57 546 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 SRA1Q9HD15 236 aaKnown RBP6.45□□□□□ -1.38
LINC00561-201ENST00000565815 CARMIL1Q5VZK9 1371 aa6.45□□□□□ -1.38
LINC00561-201ENST00000565815 GSTT1P30711 240 aa6.44□□□□□ -1.38
LINC00561-201ENST00000565815 GOLGA3Q08378 1498 aa6.44□□□□□ -1.38
LINC00561-201ENST00000565815 PRPF40BQ6NWY9 871 aaKnown RBP6.44□□□□□ -1.38
LINC00561-201ENST00000565815 USP48Q86UV5 1035 aa6.44□□□□□ -1.38
LINC00561-201ENST00000565815 TMEM102Q8N9M5 508 aaPredicted RBP6.44□□□□□ -1.38
LINC00561-201ENST00000565815 GRIN3AQ8TCU5 1115 aa6.44□□□□□ -1.38
LINC00561-201ENST00000565815 RNF34Q969K3 372 aa6.44□□□□□ -1.38
LINC00561-201ENST00000565815 SEC31BQ9NQW1 1179 aa6.44□□□□□ -1.38
LINC00561-201ENST00000565815 HOXB4P17483 251 aaPredicted RBP6.44□□□□□ -1.38
LINC00561-201ENST00000565815 AFF1P51825 1210 aaKnown RBP6.44□□□□□ -1.38
LINC00561-201ENST00000565815 C20orf204Q6ZNR8 217 aa6.44□□□□□ -1.38
LINC00561-201ENST00000565815 PMEPA1Q969W9 287 aa6.44□□□□□ -1.38
LINC00561-201ENST00000565815 GPN3Q9UHW5 284 aaPredicted RBP6.44□□□□□ -1.38
LINC00561-201ENST00000565815 POGZQ7Z3K3 1410 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 CDK8P49336 464 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 NEUROD1Q13562 356 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 CHSY3Q70JA7 882 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 PCDHB5Q9Y5E4 795 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 LINC01387J3KSC0 135 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 DDX3YO15523 660 aaKnown RBP6.43□□□□□ -1.38
LINC00561-201ENST00000565815 CTSBP07858 339 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 ITPKAP23677 461 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 PTPN11Q06124 597 aaPredicted RBP6.43□□□□□ -1.38
LINC00561-201ENST00000565815 COL9A3Q14050 684 aaPredicted RBP6.43□□□□□ -1.38
LINC00561-201ENST00000565815 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
LINC00561-201ENST00000565815 SOX13Q9UN79 622 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 IQSEC2Q5JU85 1478 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 NEO1Q92859 1461 aa6.43□□□□□ -1.38
LINC00561-201ENST00000565815 ADARB2-AS1A8MUL3 147 aa6.42□□□□□ -1.38
LINC00561-201ENST00000565815 CRKP46108 304 aa6.42□□□□□ -1.38
LINC00561-201ENST00000565815 SNRPNP63162 240 aaKnown RBP6.42□□□□□ -1.38
LINC00561-201ENST00000565815 SRSF11Q05519 484 aaKnown RBP6.42□□□□□ -1.38
LINC00561-201ENST00000565815 NAALADL2Q58DX5 795 aa6.42□□□□□ -1.38
LINC00561-201ENST00000565815 SLCO4C1Q6ZQN7 724 aa6.42□□□□□ -1.38
LINC00561-201ENST00000565815 IRF7Q92985 503 aa6.42□□□□□ -1.38
LINC00561-201ENST00000565815 TINF2Q9BSI4 451 aa6.42□□□□□ -1.38
LINC00561-201ENST00000565815 FAM229AH3BQW9 127 aa6.42□□□□□ -1.38
LINC00561-201ENST00000565815 ADAMTS1Q9UHI8 967 aa6.42□□□□□ -1.38
LINC00561-201ENST00000565815 DDX41Q9UJV9 622 aaKnown RBP6.42□□□□□ -1.38
LINC00561-201ENST00000565815 DISP1Q96F81 1524 aa6.42□□□□□ -1.38
LINC00561-201ENST00000565815 HS2ST1Q7LGA3 356 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 ERMP1Q7Z2K6 904 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 MICALL1Q8N3F8 863 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 FBXO27Q8NI29 283 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 EDARADDQ8WWZ3 215 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 USP35Q9P2H5 1018 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 PPP1R1BQ9UD71 204 aaPredicted RBP6.41□□□□□ -1.38
LINC00561-201ENST00000565815 BCORL1Q5H9F3 1711 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 SOX1O00570 391 aaPredicted RBP6.41□□□□□ -1.38
LINC00561-201ENST00000565815 SEPT6Q14141 434 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 KANK3Q6NY19 840 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 GALNT11Q8NCW6 608 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 BSNDQ8WZ55 320 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 NECAB3Q96P71 396 aaPredicted RBP6.41□□□□□ -1.38
LINC00561-201ENST00000565815 CAPN10Q9HC96 672 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 KIF21BO75037 1637 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 RGS9O75916 674 aaPredicted RBP6.41□□□□□ -1.38
LINC00561-201ENST00000565815 SMNDC1O75940 238 aaKnown RBP eCLIP6.41□□□□□ -1.38
LINC00561-201ENST00000565815 DLGAP3O95886 979 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 FBXL19Q6PCT2 694 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 IL22RA1Q8N6P7 574 aa6.41□□□□□ -1.38
LINC00561-201ENST00000565815 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.41□□□□□ -1.38
LINC00561-201ENST00000565815 CELA2BP08218 269 aaPredicted RBP6.4□□□□□ -1.38
LINC00561-201ENST00000565815 ESRRAP11474 423 aaPredicted RBP6.4□□□□□ -1.38
LINC00561-201ENST00000565815 BNC2Q6ZN30 1099 aaPredicted RBP6.4□□□□□ -1.38
LINC00561-201ENST00000565815 UBP1Q9NZI7 540 aa6.4□□□□□ -1.38
LINC00561-201ENST00000565815 KIAA0556O60303 1618 aa6.4□□□□□ -1.39
LINC00561-201ENST00000565815 TM4SF5O14894 197 aa6.4□□□□□ -1.39
LINC00561-201ENST00000565815 WFS1O76024 890 aa6.4□□□□□ -1.39
LINC00561-201ENST00000565815 TFE3P19532 575 aaPredicted RBP6.4□□□□□ -1.39
LINC00561-201ENST00000565815 AMPD1P23109 780 aa6.4□□□□□ -1.39
LINC00561-201ENST00000565815 MAP2K3P46734 347 aa6.4□□□□□ -1.39
LINC00561-201ENST00000565815 PCDH1Q08174 1060 aa6.4□□□□□ -1.39
LINC00561-201ENST00000565815 PCNX4Q63HM2 1172 aa6.4□□□□□ -1.39
LINC00561-201ENST00000565815 NPAS3Q8IXF0 933 aa6.4□□□□□ -1.39
LINC00561-201ENST00000565815 WDR89Q96FK6 387 aaPredicted RBP6.4□□□□□ -1.39
LINC00561-201ENST00000565815 CLEC4MQ9H2X3 399 aaPredicted RBP6.4□□□□□ -1.39
LINC00561-201ENST00000565815 TRAK1Q9UPV9 953 aa6.4□□□□□ -1.39
LINC00561-201ENST00000565815 DISP3Q9P2K9 1392 aa6.4□□□□□ -1.39
LINC00561-201ENST00000565815 ADAM11O75078 769 aa6.39□□□□□ -1.39
LINC00561-201ENST00000565815 GBP2P32456 591 aaPredicted RBP6.39□□□□□ -1.39
LINC00561-201ENST00000565815 NLRP12P59046 1061 aa6.39□□□□□ -1.39
LINC00561-201ENST00000565815 DMRTC2Q8IXT2 367 aaPredicted RBP6.39□□□□□ -1.39
LINC00561-201ENST00000565815 GOLGA6L1Q8N7Z2 621 aa6.39□□□□□ -1.39
LINC00561-201ENST00000565815 SRCIN1Q9C0H9 1055 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms