RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 RCOR1Q9UKL0 485 aa18.82■□□□□ 0.6
LINC00554-201ENST00000564841 TMEM232C9JQI7 657 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 TFRCP02786 760 aaKnown RBP18.81■□□□□ 0.6
LINC00554-201ENST00000564841 ACTN2P35609 894 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 G3BP1Q13283 466 aaKnown RBP eCLIP18.81■□□□□ 0.6
LINC00554-201ENST00000564841 EPHA10Q5JZY3 1008 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 OTUD7BQ6GQQ9 843 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 IRX2Q9BZI1 471 aaPredicted RBP18.81■□□□□ 0.6
LINC00554-201ENST00000564841 NCOA5Q9HCD5 579 aaKnown RBP18.81■□□□□ 0.6
LINC00554-201ENST00000564841 IMPACTQ9P2X3 320 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 XIRP1Q702N8 1843 aaKnown RBP18.81■□□□□ 0.6
LINC00554-201ENST00000564841 CTAGE5O15320 804 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 GNG11P61952 73 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 LONRF2Q1L5Z9 754 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 UBE3BQ7Z3V4 1068 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 LINS1Q8NG48 757 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 AK7Q96M32 723 aa18.81■□□□□ 0.6
LINC00554-201ENST00000564841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.81■□□□□ 0.6
LINC00554-201ENST00000564841 LMO7Q8WWI1 1683 aa18.8■□□□□ 0.6
LINC00554-201ENST00000564841 PHLPP2Q6ZVD8 1323 aa18.8■□□□□ 0.6
LINC00554-201ENST00000564841 VWA3AA6NCI4 1184 aa18.8■□□□□ 0.6
LINC00554-201ENST00000564841 CWC15Q9P013 229 aaKnown RBP18.8■□□□□ 0.6
LINC00554-201ENST00000564841 PCDHA7Q9UN72 937 aa18.8■□□□□ 0.6
LINC00554-201ENST00000564841 JRKLQ9Y4A0 524 aa18.8■□□□□ 0.6
LINC00554-201ENST00000564841 PPP2R3AQ06190 1150 aa18.79■□□□□ 0.6
LINC00554-201ENST00000564841 PHRF1Q9P1Y6 1649 aaKnown RBP18.79■□□□□ 0.6
LINC00554-201ENST00000564841 FANCCQ00597 558 aa18.79■□□□□ 0.6
LINC00554-201ENST00000564841 NCAPHQ15003 741 aa18.79■□□□□ 0.6
LINC00554-201ENST00000564841 TTLL7Q6ZT98 887 aa18.79■□□□□ 0.6
LINC00554-201ENST00000564841 NAT10Q9H0A0 1025 aaKnown RBP18.79■□□□□ 0.6
LINC00554-201ENST00000564841 PCDH11XQ9BZA7 1347 aa18.79■□□□□ 0.6
LINC00554-201ENST00000564841 PCDH11YQ9BZA8 1340 aa18.79■□□□□ 0.6
LINC00554-201ENST00000564841 ILDR1Q86SU0 546 aaPredicted RBP18.79■□□□□ 0.6
LINC00554-201ENST00000564841 TEX2Q8IWB9 1127 aa18.79■□□□□ 0.6
LINC00554-201ENST00000564841 EVI5LQ96CN4 794 aa18.79■□□□□ 0.6
LINC00554-201ENST00000564841 TTC41PQ6P2S7 1318 aa18.78■□□□□ 0.6
LINC00554-201ENST00000564841 ANKRD1Q15327 319 aa18.78■□□□□ 0.6
LINC00554-201ENST00000564841 DHX58Q96C10 678 aa18.78■□□□□ 0.6
LINC00554-201ENST00000564841 CPDO75976 1380 aa18.78■□□□□ 0.6
LINC00554-201ENST00000564841 KARSQ15046 597 aaKnown RBP18.78■□□□□ 0.6
LINC00554-201ENST00000564841 ZRSR1Q15695 479 aaKnown RBP18.78■□□□□ 0.6
LINC00554-201ENST00000564841 FMR1NBQ8N0W7 255 aaPredicted RBP18.78■□□□□ 0.6
LINC00554-201ENST00000564841 EXOC4Q96A65 974 aa18.78■□□□□ 0.6
LINC00554-201ENST00000564841 CCDC85AQ96PX6 553 aaPredicted RBP18.78■□□□□ 0.6
LINC00554-201ENST00000564841 KDM3BQ7LBC6 1761 aa18.77■□□□□ 0.6
LINC00554-201ENST00000564841 DESI2Q9BSY9 194 aa18.77■□□□□ 0.6
LINC00554-201ENST00000564841 KIAA1468Q9P260 1216 aa18.77■□□□□ 0.6
LINC00554-201ENST00000564841 PUF60Q9UHX1 559 aaKnown RBP18.77■□□□□ 0.6
LINC00554-201ENST00000564841 ASAP1Q9ULH1 1129 aa18.77■□□□□ 0.6
LINC00554-201ENST00000564841 EIF3CLB5ME19 914 aaKnown RBP18.77■□□□□ 0.6
LINC00554-201ENST00000564841 EIF3CQ99613 913 aaKnown RBP18.77■□□□□ 0.6
LINC00554-201ENST00000564841 FAN1Q9Y2M0 1017 aa18.77■□□□□ 0.6
LINC00554-201ENST00000564841 PLEKHG2Q9H7P9 1386 aa18.77■□□□□ 0.59
LINC00554-201ENST00000564841 HEG1Q9ULI3 1381 aa18.77■□□□□ 0.59
LINC00554-201ENST00000564841 A0A087WZG4 1122 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 NEURL1BA8MQ27 555 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 CTDNEP1O95476 244 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 EP400NLQ6ZTU2 488 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 GPR161Q8N6U8 529 aaKnown RBP18.76■□□□□ 0.59
LINC00554-201ENST00000564841 CARD10Q9BWT7 1032 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 ZSCAN16Q9H4T2 348 aaPredicted RBP18.76■□□□□ 0.59
LINC00554-201ENST00000564841 CACNA1FO60840 1977 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 A0A0U1RQJ8 604 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 NBPF26B4DH59 902 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 ALDH1L1O75891 902 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 POLR3DP05423 398 aaPredicted RBP18.76■□□□□ 0.59
LINC00554-201ENST00000564841 TTC31Q49AM3 519 aaPredicted RBP18.76■□□□□ 0.59
LINC00554-201ENST00000564841 NBPF14Q5TI25 921 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 NBPF10Q6P3W6 841 aaKnown RBP18.76■□□□□ 0.59
LINC00554-201ENST00000564841 CHST3Q7LGC8 479 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 NBPF15Q8N660 670 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 ATRIPQ8WXE1 791 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 HSD3B7Q9H2F3 369 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 GJB4Q9NTQ9 266 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 HSP90AB4PQ58FF6 505 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 LEKR1Q6ZMV7 388 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 TOGARAM2Q6ZUX3 1019 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 GPATCH3Q96I76 525 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 TMOD3Q9NYL9 352 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 PPP2R2CQ9Y2T4 447 aa18.76■□□□□ 0.59
LINC00554-201ENST00000564841 A0A0G2JLW4 131 aa18.75■□□□□ 0.59
LINC00554-201ENST00000564841 APOBRQ0VD83 1088 aa18.75■□□□□ 0.59
LINC00554-201ENST00000564841 GCKRQ14397 625 aa18.75■□□□□ 0.59
LINC00554-201ENST00000564841 CFAP100Q494V2 611 aa18.75■□□□□ 0.59
LINC00554-201ENST00000564841 RSRC2Q7L4I2 434 aaKnown RBP18.75■□□□□ 0.59
LINC00554-201ENST00000564841 GEMIN8Q9NWZ8 242 aaKnown RBP18.75■□□□□ 0.59
LINC00554-201ENST00000564841 COL5A2P05997 1499 aaPredicted RBP18.75■□□□□ 0.59
LINC00554-201ENST00000564841 MAP3K9P80192 1104 aa18.75■□□□□ 0.59
LINC00554-201ENST00000564841 DDX46Q7L014 1031 aaKnown RBP18.75■□□□□ 0.59
LINC00554-201ENST00000564841 NEK1Q96PY6 1258 aa18.75■□□□□ 0.59
LINC00554-201ENST00000564841 COL18A1P39060 1754 aa18.75■□□□□ 0.59
LINC00554-201ENST00000564841 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
LINC00554-201ENST00000564841 NRDCO43847 1150 aa18.74■□□□□ 0.59
LINC00554-201ENST00000564841 SERPINC1P01008 464 aa18.74■□□□□ 0.59
LINC00554-201ENST00000564841 UBASH3AP57075 661 aa18.74■□□□□ 0.59
LINC00554-201ENST00000564841 PDILTQ8N807 584 aa18.74■□□□□ 0.59
LINC00554-201ENST00000564841 CLIC4Q9Y696 253 aa18.74■□□□□ 0.59
LINC00554-201ENST00000564841 PTPDC1A2A3K4 754 aa18.74■□□□□ 0.59
LINC00554-201ENST00000564841 ATP8B1O43520 1251 aa18.74■□□□□ 0.59
LINC00554-201ENST00000564841 NSUN7Q8NE18 718 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms