RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ITPKAP23677 461 aa6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 MAOBP27338 520 aa6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 EXOSC6Q5RKV6 272 aaKnown RBP6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 RNF43Q68DV7 783 aa6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 ZDHHC13Q8IUH4 622 aa6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 CLEC10AQ8IUN9 316 aa6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 FAM83CQ9BQN1 747 aa6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 TRIM56Q9BRZ2 755 aaKnown RBP6.47□□□□□ -1.37
HMGB1P33-201ENST00000563485 ECEL1O95672 775 aa6.46□□□□□ -1.38
HMGB1P33-201ENST00000563485 MAP4P27816 1152 aaKnown RBP6.46□□□□□ -1.38
HMGB1P33-201ENST00000563485 MAPK1P28482 360 aa6.46□□□□□ -1.38
HMGB1P33-201ENST00000563485 SSTR4P31391 388 aa6.46□□□□□ -1.38
HMGB1P33-201ENST00000563485 GRM2Q14416 872 aa6.46□□□□□ -1.38
HMGB1P33-201ENST00000563485 POU4F3Q15319 338 aa6.46□□□□□ -1.38
HMGB1P33-201ENST00000563485 PRPF40BQ6NWY9 871 aaKnown RBP6.46□□□□□ -1.38
HMGB1P33-201ENST00000563485 PI16Q6UXB8 463 aa6.46□□□□□ -1.38
HMGB1P33-201ENST00000563485 NBPF11Q86T75 865 aa6.46□□□□□ -1.38
HMGB1P33-201ENST00000563485 DBNDD2Q9BQY9 259 aa6.46□□□□□ -1.38
HMGB1P33-201ENST00000563485 RXRBP28702 533 aa6.45□□□□□ -1.38
HMGB1P33-201ENST00000563485 GLIS3Q8NEA6 775 aa6.45□□□□□ -1.38
HMGB1P33-201ENST00000563485 IVNS1ABPQ9Y6Y0 642 aa6.45□□□□□ -1.38
HMGB1P33-201ENST00000563485 TMEM238LA0A1B0GVL6 79 aa6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 MED26O95402 600 aa6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 CYP11A1P05108 521 aa6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 ADH5P11766 374 aa6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 CD97P48960 835 aa6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 PTPN12Q05209 780 aaKnown RBP6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 SOX4Q06945 474 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 DSC3Q14574 896 aa6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 C2CD4AQ8NCU7 369 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 SHKBP1Q8TBC3 707 aa6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 PCMTD2Q9NV79 361 aa6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 TRAK1Q9UPV9 953 aa6.44□□□□□ -1.38
HMGB1P33-201ENST00000563485 PNMA6FA0A0J9YX94 578 aa6.43□□□□□ -1.38
HMGB1P33-201ENST00000563485 PRR19A6NJB7 356 aa6.43□□□□□ -1.38
HMGB1P33-201ENST00000563485 TREHO43280 583 aa6.43□□□□□ -1.38
HMGB1P33-201ENST00000563485 ZNF157P51786 506 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P33-201ENST00000563485 FAAP100Q0VG06 881 aa6.43□□□□□ -1.38
HMGB1P33-201ENST00000563485 CDPF1Q6NVV7 123 aa6.43□□□□□ -1.38
HMGB1P33-201ENST00000563485 DDX54Q8TDD1 881 aaKnown RBP6.43□□□□□ -1.38
HMGB1P33-201ENST00000563485 FBLIM1Q8WUP2 373 aa6.43□□□□□ -1.38
HMGB1P33-201ENST00000563485 MFSD14AQ96MC6 490 aa6.43□□□□□ -1.38
HMGB1P33-201ENST00000563485 CORO1BQ9BR76 489 aa6.43□□□□□ -1.38
HMGB1P33-201ENST00000563485 USP11P51784 963 aa6.42□□□□□ -1.38
HMGB1P33-201ENST00000563485 FCGRTP55899 365 aa6.42□□□□□ -1.38
HMGB1P33-201ENST00000563485 RPS26P11Q5JNZ5 115 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P33-201ENST00000563485 AKAP4Q5JQC9 854 aa6.42□□□□□ -1.38
HMGB1P33-201ENST00000563485 ACTL7BQ9Y614 415 aa6.42□□□□□ -1.38
HMGB1P33-201ENST00000563485 FAM95CA0A1B0GW59 222 aa6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 WDR64B1ANS9 1081 aa6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 COBLO75128 1261 aa6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 PLCB3Q01970 1234 aa6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 NFKBIBQ15653 356 aa6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 ENOX2Q16206 610 aaKnown RBP6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 HP1BP3Q5SSJ5 553 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 DTHD1Q6ZMT9 781 aa6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 BCO2Q9BYV7 579 aa6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 RAD18Q9NS91 495 aa6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 NLRP2Q9NX02 1062 aa6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 AP4E1Q9UPM8 1137 aa6.41□□□□□ -1.38
HMGB1P33-201ENST00000563485 KIAA1324LA8MWY0 1029 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 F13BP05160 661 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 RAB6AP20340 208 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 KCNA1Q09470 495 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 AP3B2Q13367 1082 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 PDE3AQ14432 1141 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 PAOXQ6QHF9 649 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 DYMQ7RTS9 669 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 SHISA5Q8N114 240 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 FBXL6Q8N531 539 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 EZH1Q92800 747 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 WDR18Q9BV38 432 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 ZFYVE1Q9HBF4 777 aa6.4□□□□□ -1.38
HMGB1P33-201ENST00000563485 AOC2O75106 756 aa6.39□□□□□ -1.39
HMGB1P33-201ENST00000563485 GRIK1P39086 918 aa6.39□□□□□ -1.39
HMGB1P33-201ENST00000563485 NXPE4Q6UWF7 544 aa6.39□□□□□ -1.39
HMGB1P33-201ENST00000563485 SETDB2Q96T68 719 aa6.39□□□□□ -1.39
HMGB1P33-201ENST00000563485 YIPF2Q9BWQ6 316 aa6.39□□□□□ -1.39
HMGB1P33-201ENST00000563485 ZC3H12CQ9C0D7 883 aaKnown RBP6.39□□□□□ -1.39
HMGB1P33-201ENST00000563485 FAM105AQ9NUU6 356 aa6.39□□□□□ -1.39
HMGB1P33-201ENST00000563485 GPN3Q9UHW5 284 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P33-201ENST00000563485 LIG1P18858 919 aa6.38□□□□□ -1.39
HMGB1P33-201ENST00000563485 SPINK2P20155 84 aa6.38□□□□□ -1.39
HMGB1P33-201ENST00000563485 HOXA10P31260 410 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P33-201ENST00000563485 ADMP35318 185 aa6.38□□□□□ -1.39
HMGB1P33-201ENST00000563485 MAPK8P45983 427 aa6.38□□□□□ -1.39
HMGB1P33-201ENST00000563485 WDR89Q96FK6 387 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P33-201ENST00000563485 CCDC86Q9H6F5 360 aaKnown RBP6.38□□□□□ -1.39
HMGB1P33-201ENST00000563485 PRKAG2Q9UGJ0 569 aa6.38□□□□□ -1.39
HMGB1P33-201ENST00000563485 NFICP08651 508 aa6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 FMR1Q06787 632 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 INTS5Q6P9B9 1019 aaKnown RBP6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 TBC1D32Q96NH3 1257 aa6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 ASB16Q96NS5 453 aa6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 TRAIPQ9BWF2 469 aa6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 SEMA6CQ9H3T2 930 aa6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 GSX1Q9H4S2 264 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P33-201ENST00000563485 ACSS3Q9H6R3 686 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms