RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 BICD2Q8TD16 824 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 ERCC4Q92889 916 aaPredicted RBP8.41□□□□□ -1.06
CDH1-203ENST00000561751 MIEF2Q96C03 454 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 SGSM3Q96HU1 749 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 BPIFA3Q9BQP9 254 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 THUMPD2Q9BTF0 503 aaKnown RBP8.41□□□□□ -1.06
CDH1-203ENST00000561751 BCL2L13Q9BXK5 485 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 TNMDQ9H2S6 317 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 PKD2L1Q9P0L9 805 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 CNPY2Q9Y2B0 182 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 EID1Q9Y6B2 187 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 AK9Q5TCS8 1911 aa8.41□□□□□ -1.06
CDH1-203ENST00000561751 ROBO1Q9Y6N7 1651 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 CCDC69A6NI79 296 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 H0YHG0 523 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 ERLIN2O94905 339 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 SYT1P21579 422 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 LTKP29376 864 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 TMPOP42166 694 aaKnown RBP8.4□□□□□ -1.06
CDH1-203ENST00000561751 SARNPP82979 210 aaKnown RBP8.4□□□□□ -1.06
CDH1-203ENST00000561751 APOBRQ0VD83 1088 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 MAP2K5Q13163 448 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 IQCB1Q15051 598 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 BRICD5Q6PL45 260 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 RNF19BQ6ZMZ0 732 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 CCDC50Q8IVM0 306 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 MPNDQ8N594 471 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 OTUD6BQ8N6M0 293 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 CTCFLQ8NI51 663 aaPredicted RBP8.4□□□□□ -1.06
CDH1-203ENST00000561751 TCP11Q8WWU5 503 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 ZBTB9Q96C00 473 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 PLEKHF1Q96S99 279 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 PAIP2Q9BPZ3 127 aaKnown RBP8.4□□□□□ -1.06
CDH1-203ENST00000561751 ESYT1Q9BSJ8 1104 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 CARD14Q9BXL6 1004 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 TOMM22Q9NS69 142 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 RAB21Q9UL25 225 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 LIMCH1Q9UPQ0 1083 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 FCF1Q9Y324 198 aaKnown RBP8.4□□□□□ -1.06
CDH1-203ENST00000561751 SH3BP1Q9Y3L3 701 aa8.4□□□□□ -1.06
CDH1-203ENST00000561751 CCDC9Q9Y3X0 531 aaKnown RBP8.4□□□□□ -1.06
CDH1-203ENST00000561751 TTC21AQ8NDW8 1320 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 CHUKO15111 745 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 ZSCAN12O43309 604 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 CD46P15529 392 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 GCFC2P16383 781 aaKnown RBP8.39□□□□□ -1.07
CDH1-203ENST00000561751 HNRNPH1P31943 449 aaKnown RBP8.39□□□□□ -1.07
CDH1-203ENST00000561751 TXLNAP40222 546 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 MAP9Q49MG5 647 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 ANO6Q4KMQ2 910 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 ATL3Q6DD88 541 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 AMOTL1Q8IY63 956 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 NAT10Q9H0A0 1025 aaKnown RBP8.39□□□□□ -1.07
CDH1-203ENST00000561751 TMX1Q9H3N1 280 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 VEZTQ9HBM0 779 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 NRBP1Q9UHY1 535 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 GGA2Q9UJY4 613 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 EXOC6BQ9Y2D4 811 aa8.39□□□□□ -1.07
CDH1-203ENST00000561751 TMEM94Q12767 1356 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 SPHKAPQ2M3C7 1700 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 ZBTB7CA1YPR0 619 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 FAM187AA6NFU0 413 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 HMMRO75330 724 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 SASH3O75995 380 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 MCM3P25205 808 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 HSPA4P34932 840 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 MNAT1P51948 309 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 ADCY2Q08462 1091 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 SART3Q15020 963 aaKnown RBP8.38□□□□□ -1.07
CDH1-203ENST00000561751 PLCB4Q15147 1175 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 CCDC144BQ3MJ40 725 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 GORABQ5T7V8 394 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 WLSQ5T9L3 541 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 E4F1Q66K89 784 aaPredicted RBP8.38□□□□□ -1.07
CDH1-203ENST00000561751 GBP6Q6ZN66 633 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 BRAPQ7Z569 592 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 LUZP1Q86V48 1076 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 TAX1BP1Q86VP1 789 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 CCDC144CPQ8IYA2 1237 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 PRPF38AQ8NAV1 312 aaKnown RBP8.38□□□□□ -1.07
CDH1-203ENST00000561751 PPP1R13BQ96KQ4 1090 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 SH3GL3Q99963 347 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 TM6SF1Q9BZW5 370 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 TMX4Q9H1E5 349 aaPredicted RBP8.38□□□□□ -1.07
CDH1-203ENST00000561751 ALDH8A1Q9H2A2 487 aaPredicted RBP8.38□□□□□ -1.07
CDH1-203ENST00000561751 BATF3Q9NR55 127 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 SMC3Q9UQE7 1217 aa8.38□□□□□ -1.07
CDH1-203ENST00000561751 TMEM2Q9UHN6 1383 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 ANKRD18BA2A2Z9 1011 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 POTECB2RU33 542 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 PES1O00541 588 aaKnown RBP8.37□□□□□ -1.07
CDH1-203ENST00000561751 IRF6O14896 467 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 SHOX2O60902 331 aaPredicted RBP8.37□□□□□ -1.07
CDH1-203ENST00000561751 IPO7O95373 1038 aaKnown RBP8.37□□□□□ -1.07
CDH1-203ENST00000561751 ELF1P32519 619 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 RPIAP49247 311 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 AARSP49588 968 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDH1-203ENST00000561751 SLC8A3P57103 927 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms