RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 KLF18A0A0U1RQI7 1052 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 ZNF804BA4D1E1 1349 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 MBD4O95243 580 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 CARMIL3Q8ND23 1372 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 RNF214Q8ND24 703 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 PDLIM2Q96JY6 352 aa12.48□□□□□ -0.41
LRRC49-227ENST00000561081 MYH15Q9Y2K3 1946 aa12.47□□□□□ -0.41
LRRC49-227ENST00000561081 FDPSP14324 419 aaKnown RBP12.47□□□□□ -0.41
LRRC49-227ENST00000561081 NKX2-3Q8TAU0 364 aa12.47□□□□□ -0.41
LRRC49-227ENST00000561081 EPB41L4AQ9HCS5 686 aaPredicted RBP12.47□□□□□ -0.41
LRRC49-227ENST00000561081 DENND2AQ9ULE3 1009 aa12.47□□□□□ -0.41
LRRC49-227ENST00000561081 GOLGA8BA8MQT2 603 aa12.47□□□□□ -0.41
LRRC49-227ENST00000561081 IFNL3Q8IZI9 196 aa12.47□□□□□ -0.41
LRRC49-227ENST00000561081 NYXQ9GZU5 481 aa12.47□□□□□ -0.41
LRRC49-227ENST00000561081 SRP68Q9UHB9 627 aaKnown RBP12.47□□□□□ -0.41
LRRC49-227ENST00000561081 CCNL1Q9UK58 526 aaPredicted RBP12.47□□□□□ -0.41
LRRC49-227ENST00000561081 GNPATO15228 680 aa12.46□□□□□ -0.41
LRRC49-227ENST00000561081 GTF2E1P29083 439 aaPredicted RBP12.46□□□□□ -0.41
LRRC49-227ENST00000561081 ADD1P35611 737 aaKnown RBP12.46□□□□□ -0.41
LRRC49-227ENST00000561081 UBE4AQ14139 1066 aa12.46□□□□□ -0.41
LRRC49-227ENST00000561081 FAM182BQ5T319 152 aa12.46□□□□□ -0.41
LRRC49-227ENST00000561081 CYB5R4Q7L1T6 521 aa12.46□□□□□ -0.41
LRRC49-227ENST00000561081 SETDB2Q96T68 719 aa12.46□□□□□ -0.41
LRRC49-227ENST00000561081 ARMT1Q9H993 441 aa12.46□□□□□ -0.41
LRRC49-227ENST00000561081 PNPLA7Q6ZV29 1317 aa12.46□□□□□ -0.41
LRRC49-227ENST00000561081 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
LRRC49-227ENST00000561081 PPFIA3O75145 1194 aa12.46□□□□□ -0.41
LRRC49-227ENST00000561081 CFAP45Q9UL16 551 aa12.46□□□□□ -0.41
LRRC49-227ENST00000561081 MINPP1Q9UNW1 487 aa12.46□□□□□ -0.41
LRRC49-227ENST00000561081 LY75O60449 1722 aa12.46□□□□□ -0.42
LRRC49-227ENST00000561081 WTIPA6NIX2 430 aaPredicted RBP12.46□□□□□ -0.42
LRRC49-227ENST00000561081 GSG1L2A8MUP6 293 aa12.46□□□□□ -0.42
LRRC49-227ENST00000561081 ZPR1O75312 459 aa12.46□□□□□ -0.42
LRRC49-227ENST00000561081 FOSBP53539 338 aa12.46□□□□□ -0.42
LRRC49-227ENST00000561081 FUCA2Q9BTY2 467 aa12.46□□□□□ -0.42
LRRC49-227ENST00000561081 ANGEL1Q9UNK9 670 aaKnown RBP12.46□□□□□ -0.42
LRRC49-227ENST00000561081 NEDD4P46934 1319 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 C4AP0C0L4 1744 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 TIAM2Q8IVF5 1701 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 ESPNB1AK53 854 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 SH2B2O14492 632 aaPredicted RBP12.45□□□□□ -0.42
LRRC49-227ENST00000561081 LIG1P18858 919 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 GNAT2P19087 354 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 GYG1P46976 350 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 GIMAP6Q6P9H5 292 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 CELF1Q92879 486 aaKnown RBP12.45□□□□□ -0.42
LRRC49-227ENST00000561081 NAPBQ9H115 298 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 LRP2BPQ9P2M1 347 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 TAF1LQ8IZX4 1826 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 AMIGO3Q86WK7 504 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 NBPF5PQ86XG9 351 aaPredicted RBP12.45□□□□□ -0.42
LRRC49-227ENST00000561081 LCORLQ8N3X6 602 aa12.45□□□□□ -0.42
LRRC49-227ENST00000561081 GNL3LQ9NVN8 582 aaKnown RBP12.45□□□□□ -0.42
LRRC49-227ENST00000561081 RTCBQ9Y3I0 505 aaKnown RBP12.45□□□□□ -0.42
LRRC49-227ENST00000561081 COL1A1P02452 1464 aaPredicted RBP12.44□□□□□ -0.42
LRRC49-227ENST00000561081 CHD4Q14839 1912 aa12.44□□□□□ -0.42
LRRC49-227ENST00000561081 GOLGA6L4A6NEF3 574 aa12.44□□□□□ -0.42
LRRC49-227ENST00000561081 B4E1Z4 1266 aa12.44□□□□□ -0.42
LRRC49-227ENST00000561081 PGBD1Q96JS3 809 aa12.44□□□□□ -0.42
LRRC49-227ENST00000561081 IQSEC3Q9UPP2 1182 aaPredicted RBP12.44□□□□□ -0.42
LRRC49-227ENST00000561081 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
LRRC49-227ENST00000561081 GJD4Q96KN9 370 aaPredicted RBP12.44□□□□□ -0.42
LRRC49-227ENST00000561081 NLRP3Q96P20 1036 aa12.44□□□□□ -0.42
LRRC49-227ENST00000561081 SBF2Q86WG5 1849 aa12.44□□□□□ -0.42
LRRC49-227ENST00000561081 PRKAB2O43741 272 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 ATL3Q6DD88 541 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 ILDR1Q86SU0 546 aaPredicted RBP12.43□□□□□ -0.42
LRRC49-227ENST00000561081 RAB11FIP4Q86YS3 637 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 IGDCC4Q8TDY8 1250 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 TMEM87BQ96K49 555 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 SLC4A4Q9Y6R1 1079 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 GUCY1B3Q02153 619 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 CTDSPL2Q05D32 466 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 UVSSAQ2YD98 709 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 CAVIN4Q5BKX8 364 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 NACAP1Q9BZK3 213 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 INCENPQ9NQS7 918 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 RCOR1Q9UKL0 485 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 TACC3Q9Y6A5 838 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 CPLX1O14810 134 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
LRRC49-227ENST00000561081 HS1BP3Q53T59 392 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 TPTE2Q6XPS3 522 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 ADGRA1Q86SQ6 560 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 MIGA1Q8NAN2 632 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 FAM84BQ96KN1 310 aaPredicted RBP12.43□□□□□ -0.42
LRRC49-227ENST00000561081 NUP62CLQ9H1M0 184 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 DACT1Q9NYF0 836 aa12.43□□□□□ -0.42
LRRC49-227ENST00000561081 ORC3Q9UBD5 711 aaPredicted RBP12.43□□□□□ -0.42
LRRC49-227ENST00000561081 CLCN1P35523 988 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 AKNAD1Q5T1N1 836 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 CNNM2Q9H8M5 875 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 LY9Q9HBG7 655 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 SENP2Q9HC62 589 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 CYP7A1P22680 504 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 TDO2P48775 406 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 APOA5Q6Q788 366 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 SGMS1Q86VZ5 419 aa12.42□□□□□ -0.42
LRRC49-227ENST00000561081 VPS37DQ86XT2 251 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms