RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 SLC34A2O95436 690 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 CTDNEP1O95476 244 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 FGAP02671 866 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 HMGB1P09429 215 aaKnown RBP7.16□□□□□ -1.26
PCAT29-204ENST00000560655 PHKA1P46020 1223 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 UBE3CQ15386 1083 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 LRRFIP1Q32MZ4 808 aaKnown RBP7.16□□□□□ -1.26
PCAT29-204ENST00000560655 FOXD4L6Q3SYB3 417 aaPredicted RBP7.16□□□□□ -1.26
PCAT29-204ENST00000560655 LARP1BQ659C4 914 aaKnown RBP7.16□□□□□ -1.26
PCAT29-204ENST00000560655 CCDC102BQ68D86 513 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 LRSAM1Q6UWE0 723 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 FOXD4L3Q6VB84 417 aaPredicted RBP7.16□□□□□ -1.26
PCAT29-204ENST00000560655 PTF1AQ7RTS3 328 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 LINC00116Q8NCU8 138 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 HELBQ8NG08 1087 aaPredicted RBP7.16□□□□□ -1.26
PCAT29-204ENST00000560655 LPIN2Q92539 896 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 PPP1R9BQ96SB3 815 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 SEC31BQ9NQW1 1179 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 AKAP11Q9UKA4 1901 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 MROH5Q6ZUA9 1318 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 LRP5O75197 1615 aa7.16□□□□□ -1.26
PCAT29-204ENST00000560655 TCRBV5S4A2TA0A5A2 114 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 C2orf72A6NCS6 295 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 SNAP23O00161 211 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 RGL2O15211 777 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 UQCRFS1P1P0C7P4 283 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 DNM1Q05193 864 aaKnown RBP7.15□□□□□ -1.26
PCAT29-204ENST00000560655 SCRN1Q12765 414 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 STK3Q13188 491 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 SF3B3Q15393 1217 aaKnown RBP7.15□□□□□ -1.26
PCAT29-204ENST00000560655 PUM3Q15397 648 aaKnown RBP7.15□□□□□ -1.26
PCAT29-204ENST00000560655 FAM98CQ17RN3 349 aaKnown RBP7.15□□□□□ -1.26
PCAT29-204ENST00000560655 SLC10A5Q5PT55 438 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 CLEC4GQ6UXB4 293 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 FAM43AQ8N2R8 423 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 BRF1Q92994 677 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 WNT2BQ93097 391 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 LLPHQ9BRT6 129 aaKnown RBP7.15□□□□□ -1.26
PCAT29-204ENST00000560655 LRRC2Q9BYS8 371 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 BCL2L12Q9HB09 334 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 NIP7Q9Y221 180 aaKnown RBP eCLIP7.15□□□□□ -1.26
PCAT29-204ENST00000560655 VPS9D1Q9Y2B5 631 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 ATP6V1DQ9Y5K8 247 aa7.15□□□□□ -1.26
PCAT29-204ENST00000560655 SYCE3A1L190 88 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 FAM177BA6PVY3 158 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 GPAA1O43292 621 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 MYH3P11055 1940 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 PDCP20941 246 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 PDIA3P30101 505 aaKnown RBP7.14□□□□□ -1.27
PCAT29-204ENST00000560655 ANTXR2P58335 489 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 UBE2HP62256 183 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 TCHHQ07283 1943 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 APOBRQ0VD83 1088 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 TTF1Q15361 905 aaPredicted RBP7.14□□□□□ -1.27
PCAT29-204ENST00000560655 WASHC4Q2M389 1173 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 CCDC152Q4G0S7 254 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 ZNF831Q5JPB2 1677 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 RC3H1Q5TC82 1133 aaKnown RBP7.14□□□□□ -1.27
PCAT29-204ENST00000560655 ZSCAN25Q6NSZ9 544 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 CDC37L1Q7L3B6 337 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 MB21D2Q8IYB1 491 aaPredicted RBP7.14□□□□□ -1.27
PCAT29-204ENST00000560655 NSUN7Q8NE18 718 aaKnown RBP7.14□□□□□ -1.27
PCAT29-204ENST00000560655 NKX2-3Q8TAU0 364 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 ZNF274Q96GC6 653 aaPredicted RBP7.14□□□□□ -1.27
PCAT29-204ENST00000560655 NGLY1Q96IV0 654 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 KCNK17Q96T54 332 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 CNTNAP4Q9C0A0 1308 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 NBPF3Q9H094 633 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 CTNNA3Q9UI47 895 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 WWC3Q9ULE0 1092 aa7.14□□□□□ -1.27
PCAT29-204ENST00000560655 ATRNO75882 1429 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 ZNF532Q9HCE3 1301 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 SALL1Q9NSC2 1324 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 VPS37CA5D8V6 355 aaPredicted RBP7.13□□□□□ -1.27
PCAT29-204ENST00000560655 UBAP1LF5GYI3 381 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 RPS6KA4O75676 772 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 SLC5A1P13866 664 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 PDE6AP16499 860 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 ADD1P35611 737 aaKnown RBP7.13□□□□□ -1.27
PCAT29-204ENST00000560655 NASPP49321 788 aaPredicted RBP7.13□□□□□ -1.27
PCAT29-204ENST00000560655 KCNQ4P56696 695 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 RESTQ13127 1097 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 ALX1Q15699 326 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 ERFEQ4G0M1 354 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 PPP4R3BQ5MIZ7 849 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 SLC9C2Q5TAH2 1124 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 FAM173BQ6P4H8 233 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 SMIM5Q71RC9 77 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 CHST3Q7LGC8 479 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 TTC6Q86TZ1 520 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 C8orf37Q96NL8 207 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 STRBPQ96SI9 672 aaKnown RBP7.13□□□□□ -1.27
PCAT29-204ENST00000560655 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.13□□□□□ -1.27
PCAT29-204ENST00000560655 RRAGDQ9NQL2 400 aaPredicted RBP7.13□□□□□ -1.27
PCAT29-204ENST00000560655 GPHNQ9NQX3 736 aaPredicted RBP7.13□□□□□ -1.27
PCAT29-204ENST00000560655 LAMA4Q16363 1823 aa7.13□□□□□ -1.27
PCAT29-204ENST00000560655 COL5A3P25940 1745 aaPredicted RBP7.13□□□□□ -1.27
PCAT29-204ENST00000560655 DDX60Q8IY21 1712 aaKnown RBP7.13□□□□□ -1.27
PCAT29-204ENST00000560655 COL4A1P02462 1669 aa7.12□□□□□ -1.27
PCAT29-204ENST00000560655 ELP1O95163 1332 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms