RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 A0A096LPE4 126 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 A0A1W2PPZ6 126 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 GLB1P16278 677 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 FSTP19883 344 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 CABP4P57796 275 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 IKBKEQ14164 716 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 DSC3Q14574 896 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 DUOXA2Q1HG44 320 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 ZNF423Q2M1K9 1284 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 KIAA0319Q5VV43 1072 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 TMC1Q8TDI8 760 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 CSRNP1Q96S65 589 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 CEP41Q9BYV8 373 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 ABCB6Q9NP58 842 aa6.72□□□□□ -1.33
TMOD3-207ENST00000560549 MRC2Q9UBG0 1479 aa6.71□□□□□ -1.34
TMOD3-207ENST00000560549 CTSBP07858 339 aa6.71□□□□□ -1.34
TMOD3-207ENST00000560549 C19orf57Q0VDD7 668 aa6.71□□□□□ -1.34
TMOD3-207ENST00000560549 EPS8L3Q8TE67 593 aaKnown RBP6.71□□□□□ -1.34
TMOD3-207ENST00000560549 DMRTB1Q96MA1 342 aa6.71□□□□□ -1.34
TMOD3-207ENST00000560549 SOX17Q9H6I2 414 aaPredicted RBP6.71□□□□□ -1.34
TMOD3-207ENST00000560549 RAXQ9Y2V3 346 aa6.71□□□□□ -1.34
TMOD3-207ENST00000560549 SCO2A0A1W2PP80 73 aa6.7□□□□□ -1.34
TMOD3-207ENST00000560549 HYAL3O43820 417 aaPredicted RBP6.7□□□□□ -1.34
TMOD3-207ENST00000560549 MAPK1P28482 360 aa6.7□□□□□ -1.34
TMOD3-207ENST00000560549 SETDB2Q96T68 719 aa6.7□□□□□ -1.34
TMOD3-207ENST00000560549 LOC100289279A0A1B0GTE1 492 aa6.69□□□□□ -1.34
TMOD3-207ENST00000560549 MEGF11A6BM72 1044 aa6.69□□□□□ -1.34
TMOD3-207ENST00000560549 FAM177BA6PVY3 158 aa6.69□□□□□ -1.34
TMOD3-207ENST00000560549 TREHO43280 583 aa6.69□□□□□ -1.34
TMOD3-207ENST00000560549 PREPP48147 710 aa6.69□□□□□ -1.34
TMOD3-207ENST00000560549 CYB5RLQ6IPT4 315 aa6.69□□□□□ -1.34
TMOD3-207ENST00000560549 MYRFLQ96LU7 910 aa6.69□□□□□ -1.34
TMOD3-207ENST00000560549 DNAJC25Q9H1X3 360 aa6.69□□□□□ -1.34
TMOD3-207ENST00000560549 ZNF576Q9H609 170 aa6.69□□□□□ -1.34
TMOD3-207ENST00000560549 WDR62O43379 1518 aa6.68□□□□□ -1.34
TMOD3-207ENST00000560549 ECEL1O95672 775 aa6.68□□□□□ -1.34
TMOD3-207ENST00000560549 ITPKAP23677 461 aa6.68□□□□□ -1.34
TMOD3-207ENST00000560549 PCDH1Q08174 1060 aa6.68□□□□□ -1.34
TMOD3-207ENST00000560549 GRM2Q14416 872 aa6.68□□□□□ -1.34
TMOD3-207ENST00000560549 ANKRD34AQ69YU3 496 aa6.68□□□□□ -1.34
TMOD3-207ENST00000560549 TRIM56Q9BRZ2 755 aaKnown RBP6.68□□□□□ -1.34
TMOD3-207ENST00000560549 EHD4Q9H223 541 aa6.68□□□□□ -1.34
TMOD3-207ENST00000560549 CLEC4MQ9H2X3 399 aaPredicted RBP6.68□□□□□ -1.34
TMOD3-207ENST00000560549 EEA1Q15075 1411 aa6.67□□□□□ -1.34
TMOD3-207ENST00000560549 GSC2O15499 205 aa6.67□□□□□ -1.34
TMOD3-207ENST00000560549 DHX15O43143 795 aaKnown RBP6.67□□□□□ -1.34
TMOD3-207ENST00000560549 PRPF40BQ6NWY9 871 aaKnown RBP6.67□□□□□ -1.34
TMOD3-207ENST00000560549 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.67□□□□□ -1.34
TMOD3-207ENST00000560549 USP26Q9BXU7 913 aa6.67□□□□□ -1.34
TMOD3-207ENST00000560549 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
TMOD3-207ENST00000560549 RNF208Q9H0X6 261 aa6.67□□□□□ -1.34
TMOD3-207ENST00000560549 PNMA6FA0A0J9YX94 578 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 IGLV1-40P01703 118 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 NEFLP07196 543 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 FAAP100Q0VG06 881 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 DNAJC14Q6Y2X3 702 aaPredicted RBP6.66□□□□□ -1.34
TMOD3-207ENST00000560549 FAM20CQ8IXL6 584 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 RUSC1Q9BVN2 902 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 TMPRSS13Q9BYE2 586 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 TNIKQ9UKE5 1360 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 CUX1P39880 1505 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 ARL4DP49703 201 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 GSTM4Q03013 218 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 FMR1Q06787 632 aaKnown RBP eCLIP6.66□□□□□ -1.34
TMOD3-207ENST00000560549 ENOX2Q16206 610 aaKnown RBP6.66□□□□□ -1.34
TMOD3-207ENST00000560549 CCDC27Q2M243 656 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 UTP4Q969X6 686 aaKnown RBP6.66□□□□□ -1.34
TMOD3-207ENST00000560549 C7orf69Q9H7B7 122 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 SUGCTQ9HAC7 445 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 STOML1Q9UBI4 398 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 WWC3Q9ULE0 1092 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 HIF3AQ9Y2N7 669 aa6.66□□□□□ -1.34
TMOD3-207ENST00000560549 URB2Q14146 1524 aaKnown RBP6.65□□□□□ -1.35
TMOD3-207ENST00000560549 GADD45BO75293 160 aaPredicted RBP6.65□□□□□ -1.35
TMOD3-207ENST00000560549 TIAF1O95411 115 aa6.65□□□□□ -1.35
TMOD3-207ENST00000560549 B3GALT4O96024 378 aa6.65□□□□□ -1.35
TMOD3-207ENST00000560549 ZDHHC13Q8IUH4 622 aa6.65□□□□□ -1.35
TMOD3-207ENST00000560549 CLEC10AQ8IUN9 316 aa6.65□□□□□ -1.35
TMOD3-207ENST00000560549 SMG8Q8ND04 991 aaKnown RBP6.65□□□□□ -1.35
TMOD3-207ENST00000560549 ASB16Q96NS5 453 aa6.65□□□□□ -1.35
TMOD3-207ENST00000560549 TOP2BQ02880 1626 aa6.65□□□□□ -1.35
TMOD3-207ENST00000560549 TMEM238LA0A1B0GVL6 79 aa6.64□□□□□ -1.35
TMOD3-207ENST00000560549 CD97P48960 835 aa6.64□□□□□ -1.35
TMOD3-207ENST00000560549 RNF43Q68DV7 783 aa6.64□□□□□ -1.35
TMOD3-207ENST00000560549 FAM83CQ9BQN1 747 aa6.64□□□□□ -1.35
TMOD3-207ENST00000560549 CEP162Q5TB80 1403 aa6.64□□□□□ -1.35
TMOD3-207ENST00000560549 KIAA1324LA8MWY0 1029 aaPredicted RBP6.63□□□□□ -1.35
TMOD3-207ENST00000560549 EIF4EBP3O60516 100 aaPredicted RBP6.63□□□□□ -1.35
TMOD3-207ENST00000560549 DRD2P14416 443 aa6.63□□□□□ -1.35
TMOD3-207ENST00000560549 MAPK8P45983 427 aa6.63□□□□□ -1.35
TMOD3-207ENST00000560549 ZNF157P51786 506 aaPredicted RBP6.63□□□□□ -1.35
TMOD3-207ENST00000560549 NFIAQ12857 509 aa6.63□□□□□ -1.35
TMOD3-207ENST00000560549 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.63□□□□□ -1.35
TMOD3-207ENST00000560549 TRIM42Q8IWZ5 723 aa6.63□□□□□ -1.35
TMOD3-207ENST00000560549 BCO2Q9BYV7 579 aa6.63□□□□□ -1.35
TMOD3-207ENST00000560549 HMX2A2RU54 273 aa6.62□□□□□ -1.35
TMOD3-207ENST00000560549 MAOBP27338 520 aa6.62□□□□□ -1.35
TMOD3-207ENST00000560549 PLCB3Q01970 1234 aa6.62□□□□□ -1.35
TMOD3-207ENST00000560549 NXPE4Q6UWF7 544 aa6.62□□□□□ -1.35
TMOD3-207ENST00000560549 ZNF428Q96B54 188 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms