RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
SNRPA1-211ENST00000560433 GRIK5Q16478 980 aa12.92□□□□□ -0.34
SNRPA1-211ENST00000560433 ZNF622Q969S3 477 aaKnown RBP eCLIP12.92□□□□□ -0.341e-7■□□□□ 10.2
SNRPA1-211ENST00000560433 NBPF3Q9H094 633 aa12.92□□□□□ -0.34
SNRPA1-211ENST00000560433 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-211ENST00000560433 RTN4Q9NQC3 1192 aaKnown RBP12.92□□□□□ -0.34
SNRPA1-211ENST00000560433 IRS2Q9Y4H2 1338 aa12.92□□□□□ -0.34
SNRPA1-211ENST00000560433 C6orf229H3BNL8 230 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 CTDSPL2Q05D32 466 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 APOBRQ0VD83 1088 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 RAB11FIP4Q86YS3 637 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 IFNL3Q8IZI9 196 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 DOCK2Q92608 1830 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 ANKRD31Q8N7Z5 1873 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 SRGNP10124 158 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 BRIP1Q9BX63 1249 aa12.91□□□□□ -0.34
SNRPA1-211ENST00000560433 GSG1L2A8MUP6 293 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 PPEF1O14829 653 aaPredicted RBP12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 MECOMQ03112 1051 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 SLC4A8Q2Y0W8 1093 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 DHX32Q7L7V1 743 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 TICAM2Q86XR7 235 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 FLAD1Q8NFF5 587 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 STK32BQ9NY57 414 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 CTNNA3Q9UI47 895 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 MYH13Q9UKX3 1938 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 PATL2C9JE40 543 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 GJB2P29033 226 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 CHRNA5P30532 468 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 CCT2P78371 535 aaKnown RBP12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 EVX2Q03828 476 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 NAA16Q6N069 864 aaPredicted RBP12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 NAPBQ9H115 298 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 AATFQ9NY61 560 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 GGA1Q9UJY5 639 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 SMC3Q9UQE7 1217 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 LEMD3Q9Y2U8 911 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 TACC3Q9Y6A5 838 aa12.9□□□□□ -0.34
SNRPA1-211ENST00000560433 KLRG2A4D1S0 409 aaPredicted RBP12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 BBOX1O75936 387 aa12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 HOXA10P31260 410 aaPredicted RBP12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 NUCB2P80303 420 aa12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 TBC1D16Q8TBP0 767 aa12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 NSUN4Q96CB9 384 aaKnown RBP12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 CYP2D7A0A087X1C5 515 aa12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 MAGEB6P1A0A0J9YX57 407 aa12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 TDO2P48775 406 aa12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 EXOSC10Q01780 885 aaKnown RBP12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 MCTP1Q6DN14 999 aa12.89□□□□□ -0.35
SNRPA1-211ENST00000560433 B4E1Z4 1266 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 BAG4O95429 457 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 DIXDC1Q155Q3 683 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 CRAMP1Q96RY5 1269 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 NCOA5Q9HCD5 579 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 MINDY4BA8MYZ0 360 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 JAK2O60674 1132 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 ANTXR2P58335 489 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 ANKRD1Q15327 319 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 TPRNQ4KMQ1 711 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 RRP12Q5JTH9 1297 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 FBXW7Q969H0 707 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 RIOK1Q9BRS2 568 aaKnown RBP12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 CD209Q9NNX6 404 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 TOMM22Q9NS69 142 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 NEDD4P46934 1319 aa12.88□□□□□ -0.35
SNRPA1-211ENST00000560433 PRC1O43663 620 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 SYT1P21579 422 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 SCRN1Q12765 414 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 ZNF804AQ7Z570 1209 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 RALYLQ86SE5 291 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 DDX11Q96FC9 970 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 NPR1P16066 1061 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 PDE6BP35913 854 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 BAG6P46379 1132 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 FOSBP53539 338 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 C2CD5Q86YS7 1000 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 TDRD7Q8NHU6 1098 aaKnown RBP12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 NCOA7Q8NI08 942 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 GBP4Q96PP9 640 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 SENP2Q9HC62 589 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 TAOK2Q9UL54 1235 aa12.87□□□□□ -0.35
SNRPA1-211ENST00000560433 BRD1O95696 1058 aa12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 ATP2B4P23634 1241 aa12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 DZIP1Q86YF9 867 aaKnown RBP12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 ZKSCAN3Q9BRR0 538 aa12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 SEMA3EO15041 775 aa12.86□□□□□ -0.35
SNRPA1-211ENST00000560433 RXRAP19793 462 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms