RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 ZNF837Q96EG3 531 aaPredicted RBP7.97□□□□□ -1.13
CLPX-206ENST00000560166 KCTD15Q96SI1 283 aaPredicted RBP7.97□□□□□ -1.13
CLPX-206ENST00000560166 ZNF395Q9H8N7 513 aaPredicted RBP7.97□□□□□ -1.13
CLPX-206ENST00000560166 THRAP3Q9Y2W1 955 aaKnown RBP7.97□□□□□ -1.13
CLPX-206ENST00000560166 SHANK3Q9BYB0 1731 aa7.97□□□□□ -1.13
CLPX-206ENST00000560166 ADAMTS7Q9UKP4 1686 aa7.96□□□□□ -1.13
CLPX-206ENST00000560166 IL2RBP14784 551 aa7.96□□□□□ -1.14
CLPX-206ENST00000560166 TXNRD1Q16881 649 aa7.96□□□□□ -1.14
CLPX-206ENST00000560166 FOXR1Q6PIV2 292 aa7.96□□□□□ -1.14
CLPX-206ENST00000560166 PTF1AQ7RTS3 328 aa7.96□□□□□ -1.14
CLPX-206ENST00000560166 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.96□□□□□ -1.14
CLPX-206ENST00000560166 CHMP4AQ9BY43 222 aa7.96□□□□□ -1.14
CLPX-206ENST00000560166 FKBPLQ9UIM3 349 aa7.96□□□□□ -1.14
CLPX-206ENST00000560166 CDV3Q9UKY7 258 aaKnown RBP7.96□□□□□ -1.14
CLPX-206ENST00000560166 PCDH11XQ9BZA7 1347 aa7.96□□□□□ -1.14
CLPX-206ENST00000560166 PCDH11YQ9BZA8 1340 aa7.96□□□□□ -1.14
CLPX-206ENST00000560166 ATP10DQ9P241 1426 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 PKD1L3Q7Z443 1732 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 MRC1P22897 1456 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 ZBBXA8MT70 800 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 OIP5O43482 229 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 ATP9BO43861 1147 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 RRP1P56182 461 aaKnown RBP7.95□□□□□ -1.14
CLPX-206ENST00000560166 SNRPNP63162 240 aaKnown RBP7.95□□□□□ -1.14
CLPX-206ENST00000560166 DDB1Q16531 1140 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 ALDH1L2Q3SY69 923 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 LYSMD3Q7Z3D4 306 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 IFNL2Q8IZJ0 200 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 IL17REQ8NFR9 667 aa7.95□□□□□ -1.14
CLPX-206ENST00000560166 SUPT16HQ9Y5B9 1047 aaKnown RBP7.95□□□□□ -1.14
CLPX-206ENST00000560166 PARP4Q9UKK3 1724 aaKnown RBP7.95□□□□□ -1.14
CLPX-206ENST00000560166 RGPD3A6NKT7 1758 aaPredicted RBP7.94□□□□□ -1.14
CLPX-206ENST00000560166 RGPD4Q7Z3J3 1758 aa7.94□□□□□ -1.14
CLPX-206ENST00000560166 GPR25O00155 361 aa7.94□□□□□ -1.14
CLPX-206ENST00000560166 BRD1O95696 1058 aa7.94□□□□□ -1.14
CLPX-206ENST00000560166 HOXB7P09629 217 aa7.94□□□□□ -1.14
CLPX-206ENST00000560166 PHKG2P15735 406 aa7.94□□□□□ -1.14
CLPX-206ENST00000560166 POLD1P28340 1107 aa7.94□□□□□ -1.14
CLPX-206ENST00000560166 RARSP54136 660 aaKnown RBP7.94□□□□□ -1.14
CLPX-206ENST00000560166 TAF7Q15545 349 aaPredicted RBP7.94□□□□□ -1.14
CLPX-206ENST00000560166 DBN1Q16643 649 aa7.94□□□□□ -1.14
CLPX-206ENST00000560166 MCM10Q7L590 875 aa7.94□□□□□ -1.14
CLPX-206ENST00000560166 ZCRB1Q8TBF4 217 aaKnown RBP7.94□□□□□ -1.14
CLPX-206ENST00000560166 PIK3CDO00329 1044 aa7.93□□□□□ -1.14
CLPX-206ENST00000560166 RNMTO43148 476 aaKnown RBP7.93□□□□□ -1.14
CLPX-206ENST00000560166 ATG7O95352 703 aa7.93□□□□□ -1.14
CLPX-206ENST00000560166 COL8A1P27658 744 aa7.93□□□□□ -1.14
CLPX-206ENST00000560166 EXOSC9Q06265 439 aaKnown RBP7.93□□□□□ -1.14
CLPX-206ENST00000560166 TEFQ10587 303 aa7.93□□□□□ -1.14
CLPX-206ENST00000560166 KDF1Q8NAX2 398 aaPredicted RBP7.93□□□□□ -1.14
CLPX-206ENST00000560166 TSR2Q969E8 191 aaKnown RBP7.93□□□□□ -1.14
CLPX-206ENST00000560166 THUMPD2Q9BTF0 503 aaKnown RBP7.93□□□□□ -1.14
CLPX-206ENST00000560166 KIF16BQ96L93 1317 aa7.93□□□□□ -1.14
CLPX-206ENST00000560166 TNS2Q63HR2 1409 aa7.93□□□□□ -1.14
CLPX-206ENST00000560166 ERVV-2B6SEH9 535 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 PATL2C9JE40 543 aaKnown RBP7.92□□□□□ -1.14
CLPX-206ENST00000560166 CYP27B1O15528 508 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 GRIN3BO60391 1043 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 ITGB7P26010 798 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 MFAP1P55081 439 aaKnown RBP7.92□□□□□ -1.14
CLPX-206ENST00000560166 KCNA1Q09470 495 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 AAMPQ13685 434 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 DCTN1Q14203 1278 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 PDE3AQ14432 1141 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 INTS6LQ5JSJ4 861 aaKnown RBP7.92□□□□□ -1.14
CLPX-206ENST00000560166 COL13A1Q5TAT6 717 aaPredicted RBP7.92□□□□□ -1.14
CLPX-206ENST00000560166 TNS4Q8IZW8 715 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 NLGN2Q8NFZ4 835 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 VRTNQ9H8Y1 702 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 TSPYL4Q9UJ04 414 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 MKL2Q9ULH7 1088 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 KDM6AO15550 1401 aaPredicted RBP7.92□□□□□ -1.14
CLPX-206ENST00000560166 RGPD5Q99666 1765 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 CEP350Q5VT06 3117 aa7.92□□□□□ -1.14
CLPX-206ENST00000560166 VAMP4O75379 141 aa7.91□□□□□ -1.14
CLPX-206ENST00000560166 YBX3P16989 372 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLPX-206ENST00000560166 PTGIRP43119 386 aa7.91□□□□□ -1.14
CLPX-206ENST00000560166 TWISTNBQ3B726 338 aaPredicted RBP7.91□□□□□ -1.14
CLPX-206ENST00000560166 PDXDC2PQ6P474 469 aa7.91□□□□□ -1.14
CLPX-206ENST00000560166 ARHGAP45Q92619 1136 aa7.91□□□□□ -1.14
CLPX-206ENST00000560166 SLC52A2Q9HAB3 445 aa7.91□□□□□ -1.14
CLPX-206ENST00000560166 HEG1Q9ULI3 1381 aa7.91□□□□□ -1.14
CLPX-206ENST00000560166 RGPD2P0DJD1 1756 aa7.91□□□□□ -1.14
CLPX-206ENST00000560166 DLG5Q8TDM6 1919 aa7.9□□□□□ -1.14
CLPX-206ENST00000560166 SBF2Q86WG5 1849 aa7.9□□□□□ -1.14
CLPX-206ENST00000560166 ZC3H4Q9UPT8 1303 aaKnown RBP7.9□□□□□ -1.14
CLPX-206ENST00000560166 TMEM88BA6NKF7 163 aa7.9□□□□□ -1.14
CLPX-206ENST00000560166 IPO8O15397 1037 aaKnown RBP7.9□□□□□ -1.14
CLPX-206ENST00000560166 ADH1AP07327 375 aa7.9□□□□□ -1.14
CLPX-206ENST00000560166 SKIP12755 728 aa7.9□□□□□ -1.14
CLPX-206ENST00000560166 MPRIPQ6WCQ1 1025 aa7.9□□□□□ -1.14
CLPX-206ENST00000560166 KRTAP9-9Q9BYP9 154 aa7.9□□□□□ -1.14
CLPX-206ENST00000560166 KRTAP9-4Q9BYQ2 154 aa7.9□□□□□ -1.14
CLPX-206ENST00000560166 LAS1LQ9Y4W2 734 aaKnown RBP7.9□□□□□ -1.14
CLPX-206ENST00000560166 BCL9O00512 1426 aa7.89□□□□□ -1.15
CLPX-206ENST00000560166 RNF144AP50876 292 aaPredicted RBP7.89□□□□□ -1.15
CLPX-206ENST00000560166 PRELPP51888 382 aa7.89□□□□□ -1.15
CLPX-206ENST00000560166 MARCH10Q8NA82 808 aaPredicted RBP7.89□□□□□ -1.15
CLPX-206ENST00000560166 C8orf58Q8NAV2 365 aa7.89□□□□□ -1.15
CLPX-206ENST00000560166 SLC10A4Q96EP9 437 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms