RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, human

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-209	ENST00000560013	POLL	Q9UGP5	575 aa		27.95	■■■□□ 2.06
TM2D3-209	ENST00000560013	ZNF213	O14771	459 aa		27.94	■■■□□ 2.06
TM2D3-209	ENST00000560013	GNAT2	P19087	354 aa		27.94	■■■□□ 2.06
TM2D3-209	ENST00000560013	TCEANC2	Q96MN5	208 aa		27.94	■■■□□ 2.06
TM2D3-209	ENST00000560013	ALX1	Q15699	326 aa		27.93	■■■□□ 2.06
TM2D3-209	ENST00000560013	NAA16	Q6N069	864 aa	Predicted RBP	27.93	■■■□□ 2.06
TM2D3-209	ENST00000560013	CCDC125	Q86Z20	511 aa		27.93	■■■□□ 2.06
TM2D3-209	ENST00000560013	SH2B1	Q9NRF2	756 aa	Predicted RBP	27.93	■■■□□ 2.06
TM2D3-209	ENST00000560013	DHX32	Q7L7V1	743 aa	Known RBP	27.93	■■■□□ 2.06
TM2D3-209	ENST00000560013	ADGRA1	Q86SQ6	560 aa		27.93	■■■□□ 2.06
TM2D3-209	ENST00000560013	C2CD5	Q86YS7	1000 aa		27.93	■■■□□ 2.06
TM2D3-209	ENST00000560013		H0YIN7	160 aa		27.92	■■■□□ 2.06
TM2D3-209	ENST00000560013	HAND2	P61296	217 aa		27.92	■■■□□ 2.06
TM2D3-209	ENST00000560013	TOB2	Q14106	344 aa	Predicted RBP	27.92	■■■□□ 2.06
TM2D3-209	ENST00000560013	RAB3GAP1	Q15042	981 aa		27.92	■■■□□ 2.06
TM2D3-209	ENST00000560013	LCORL	Q8N3X6	602 aa		27.92	■■■□□ 2.06
TM2D3-209	ENST00000560013	MIGA1	Q8NAN2	632 aa		27.92	■■■□□ 2.06
TM2D3-209	ENST00000560013	WDR66	Q8TBY9	1149 aa		27.92	■■■□□ 2.06
TM2D3-209	ENST00000560013	ZMYM6	O95789	1325 aa		27.92	■■■□□ 2.06
TM2D3-209	ENST00000560013	SALL1	Q9NSC2	1324 aa		27.91	■■■□□ 2.06
TM2D3-209	ENST00000560013	C6orf229	H3BNL8	230 aa		27.91	■■■□□ 2.06
TM2D3-209	ENST00000560013	SPTY2D1	Q68D10	685 aa	Predicted RBP	27.91	■■■□□ 2.06
TM2D3-209	ENST00000560013	TMED8	Q6PL24	325 aa	Predicted RBP	27.91	■■■□□ 2.06
TM2D3-209	ENST00000560013	ZNF622	Q969S3	477 aa	Known RBP eCLIP	27.91	■■■□□ 2.06
TM2D3-209	ENST00000560013	NSUN4	Q96CB9	384 aa	Known RBP	27.91	■■■□□ 2.06
TM2D3-209	ENST00000560013	PDGFD	Q9GZP0	370 aa	Predicted RBP	27.91	■■■□□ 2.06
TM2D3-209	ENST00000560013	CD209	Q9NNX6	404 aa		27.91	■■■□□ 2.06
TM2D3-209	ENST00000560013	IFNL3	Q8IZI9	196 aa		27.91	■■■□□ 2.06
TM2D3-209	ENST00000560013	ZNF384	Q8TF68	577 aa		27.91	■■■□□ 2.06
TM2D3-209	ENST00000560013	MAGEB6P1	A0A0J9YX57	407 aa		27.9	■■■□□ 2.06
TM2D3-209	ENST00000560013	IGSF3	O75054	1194 aa		27.9	■■■□□ 2.06
TM2D3-209	ENST00000560013	LARGE1	O95461	756 aa		27.9	■■■□□ 2.06
TM2D3-209	ENST00000560013	MECOM	Q03112	1051 aa		27.9	■■■□□ 2.06
TM2D3-209	ENST00000560013	STYK1	Q6J9G0	422 aa		27.9	■■■□□ 2.06
TM2D3-209	ENST00000560013	TMX4	Q9H1E5	349 aa	Predicted RBP	27.9	■■■□□ 2.06
TM2D3-209	ENST00000560013	TPCN1	Q9ULQ1	816 aa		27.9	■■■□□ 2.06
TM2D3-209	ENST00000560013	SLC4A4	Q9Y6R1	1079 aa		27.9	■■■□□ 2.06
TM2D3-209	ENST00000560013	MAST2	Q6P0Q8	1798 aa		27.9	■■■□□ 2.06
TM2D3-209	ENST00000560013	GSG1L2	A8MUP6	293 aa		27.89	■■■□□ 2.06
TM2D3-209	ENST00000560013	IL1R1	P14778	569 aa		27.89	■■■□□ 2.06
TM2D3-209	ENST00000560013	PRDX5	P30044	214 aa		27.89	■■■□□ 2.06
TM2D3-209	ENST00000560013	NUCB2	P80303	420 aa		27.89	■■■□□ 2.06
TM2D3-209	ENST00000560013	ME3	Q16798	604 aa		27.89	■■■□□ 2.06
TM2D3-209	ENST00000560013	EXOSC10	Q01780	885 aa	Known RBP	27.89	■■■□□ 2.05
TM2D3-209	ENST00000560013		Q6ZUG5	572 aa		27.89	■■■□□ 2.05
TM2D3-209	ENST00000560013	MPND	Q8N594	471 aa		27.89	■■■□□ 2.05
TM2D3-209	ENST00000560013	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	27.89	■■■□□ 2.05
TM2D3-209	ENST00000560013	JAG2	Q9Y219	1238 aa		27.89	■■■□□ 2.05
TM2D3-209	ENST00000560013	NACAP1	Q9BZK3	213 aa		27.88	■■■□□ 2.05
TM2D3-209	ENST00000560013	NAPB	Q9H115	298 aa		27.88	■■■□□ 2.05
TM2D3-209	ENST00000560013	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	27.88	■■■□□ 2.05
TM2D3-209	ENST00000560013	PRKAB2	O43741	272 aa		27.87	■■■□□ 2.05
TM2D3-209	ENST00000560013	SLC16A10	Q8TF71	515 aa		27.87	■■■□□ 2.05
TM2D3-209	ENST00000560013	RIOK1	Q9BRS2	568 aa	Known RBP	27.87	■■■□□ 2.05
TM2D3-209	ENST00000560013	TNPO1	Q92973	898 aa	Known RBP	27.87	■■■□□ 2.05
TM2D3-209	ENST00000560013	KIAA1551	Q9HCM1	1747 aa		27.86	■■■□□ 2.05
TM2D3-209	ENST00000560013	NCOA7	Q8NI08	942 aa		27.86	■■■□□ 2.05
TM2D3-209	ENST00000560013	OLFM4	Q6UX06	510 aa		27.85	■■■□□ 2.05
TM2D3-209	ENST00000560013	DPP8	Q6V1X1	898 aa	Predicted RBP	27.85	■■■□□ 2.05
TM2D3-209	ENST00000560013	LDHB	P07195	334 aa	Known RBP	27.85	■■■□□ 2.05
TM2D3-209	ENST00000560013	FGD1	P98174	961 aa		27.85	■■■□□ 2.05
TM2D3-209	ENST00000560013	DZIP1	Q86YF9	867 aa	Known RBP	27.85	■■■□□ 2.05
TM2D3-209	ENST00000560013	CCDC83	Q8IWF9	413 aa		27.85	■■■□□ 2.05
TM2D3-209	ENST00000560013	NBPF3	Q9H094	633 aa		27.85	■■■□□ 2.05
TM2D3-209	ENST00000560013	CHD4	Q14839	1912 aa		27.84	■■■□□ 2.05
TM2D3-209	ENST00000560013	DUOX1	Q9NRD9	1551 aa		27.84	■■■□□ 2.05
TM2D3-209	ENST00000560013	CNKSR1	Q969H4	720 aa		27.84	■■■□□ 2.05
TM2D3-209	ENST00000560013	LRRC2	Q9BYS8	371 aa		27.84	■■■□□ 2.05
TM2D3-209	ENST00000560013	AGXT2	Q9BYV1	514 aa		27.84	■■■□□ 2.05
TM2D3-209	ENST00000560013	SLX4	Q8IY92	1834 aa		27.84	■■■□□ 2.05
TM2D3-209	ENST00000560013	CHRNA5	P30532	468 aa		27.83	■■■□□ 2.05
TM2D3-209	ENST00000560013	TDO2	P48775	406 aa		27.83	■■■□□ 2.05
TM2D3-209	ENST00000560013	RALYL	Q86SE5	291 aa	Known RBP	27.83	■■■□□ 2.05
TM2D3-209	ENST00000560013	DYNLL1	P63167	89 aa	Known RBP	27.83	■■■□□ 2.04
TM2D3-209	ENST00000560013	TRDN	Q13061	729 aa		27.83	■■■□□ 2.04
TM2D3-209	ENST00000560013	BRF1	Q92994	677 aa		27.83	■■■□□ 2.04
TM2D3-209	ENST00000560013	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.83	■■■□□ 2.04
TM2D3-209	ENST00000560013	MCM5	P33992	734 aa		27.82	■■■□□ 2.04
TM2D3-209	ENST00000560013	PKP1	Q13835	747 aa		27.82	■■■□□ 2.04
TM2D3-209	ENST00000560013	TBC1D10C	Q8IV04	446 aa		27.82	■■■□□ 2.04
TM2D3-209	ENST00000560013	MB21D2	Q8IYB1	491 aa	Predicted RBP	27.82	■■■□□ 2.04
TM2D3-209	ENST00000560013	FBXL16	Q8N461	479 aa		27.82	■■■□□ 2.04
TM2D3-209	ENST00000560013	COA1	Q9GZY4	146 aa		27.82	■■■□□ 2.04
TM2D3-209	ENST00000560013	RIMBP2	O15034	1052 aa		27.81	■■■□□ 2.04
TM2D3-209	ENST00000560013	ST3GAL1	Q11201	340 aa		27.81	■■■□□ 2.04
TM2D3-209	ENST00000560013	NECAB1	Q8N987	351 aa		27.81	■■■□□ 2.04
TM2D3-209	ENST00000560013	SDR42E1	Q8WUS8	393 aa		27.81	■■■□□ 2.04
TM2D3-209	ENST00000560013	CHST3	Q7LGC8	479 aa		27.81	■■■□□ 2.04
TM2D3-209	ENST00000560013	SMC3	Q9UQE7	1217 aa		27.81	■■■□□ 2.04
TM2D3-209	ENST00000560013	GSTO1	P78417	241 aa		27.79	■■■□□ 2.04
TM2D3-209	ENST00000560013	AATF	Q9NY61	560 aa	Known RBP eCLIP	27.79	■■■□□ 2.04
TM2D3-209	ENST00000560013	WDR19	Q8NEZ3	1342 aa		27.79	■■■□□ 2.04
TM2D3-209	ENST00000560013	MCM4	P33991	863 aa		27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	TBC1D22A	Q8WUA7	517 aa		27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	EYA3	Q99504	573 aa		27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	TIAM2	Q8IVF5	1701 aa		27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	C10orf71	Q711Q0	1435 aa		27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	MYH2	Q9UKX2	1941 aa		27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	PRC1	O43663	620 aa		27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	GIMAP6	Q6P9H5	292 aa		27.78	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms