RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZNF576Q9H609 170 aa7.03□□□□□ -1.28
SPG11-218ENST00000559754 C7orf69Q9H7B7 122 aa7.03□□□□□ -1.28
SPG11-218ENST00000559754 NLRP2Q9NX02 1062 aa7.03□□□□□ -1.28
SPG11-218ENST00000559754 PLCB3Q01970 1234 aa7.02□□□□□ -1.29
SPG11-218ENST00000559754 NFIAQ12857 509 aa7.02□□□□□ -1.29
SPG11-218ENST00000559754 RPS26P11Q5JNZ5 115 aaPredicted RBP7.02□□□□□ -1.29
SPG11-218ENST00000559754 RNF43Q68DV7 783 aa7.02□□□□□ -1.29
SPG11-218ENST00000559754 BEND4Q6ZU67 534 aa7.02□□□□□ -1.29
SPG11-218ENST00000559754 CORO1BQ9BR76 489 aa7.02□□□□□ -1.29
SPG11-218ENST00000559754 IVNS1ABPQ9Y6Y0 642 aa7.02□□□□□ -1.29
SPG11-218ENST00000559754 TMEM238LA0A1B0GVL6 79 aa7.01□□□□□ -1.29
SPG11-218ENST00000559754 TIAF1O95411 115 aa7.01□□□□□ -1.29
SPG11-218ENST00000559754 POU4F3Q15319 338 aa7.01□□□□□ -1.29
SPG11-218ENST00000559754 NBPF11Q86T75 865 aa7.01□□□□□ -1.29
SPG11-218ENST00000559754 ZSCAN29Q8IWY8 852 aaPredicted RBP7.01□□□□□ -1.29
SPG11-218ENST00000559754 TRIM42Q8IWZ5 723 aa7.01□□□□□ -1.29
SPG11-218ENST00000559754 DBNDD2Q9BQY9 259 aa7.01□□□□□ -1.29
SPG11-218ENST00000559754 NRSN2Q9GZP1 204 aa7.01□□□□□ -1.29
SPG11-218ENST00000559754 ABCB6Q9NP58 842 aa7.01□□□□□ -1.29
SPG11-218ENST00000559754 HMX2A2RU54 273 aa7□□□□□ -1.29
SPG11-218ENST00000559754 HYAL3O43820 417 aaPredicted RBP7□□□□□ -1.29
SPG11-218ENST00000559754 MAOBP27338 520 aa7□□□□□ -1.29
SPG11-218ENST00000559754 MAP4P27816 1152 aaKnown RBP7□□□□□ -1.29
SPG11-218ENST00000559754 HNRNPUQ00839 825 aaKnown RBP eCLIP7□□□□□ -1.29
SPG11-218ENST00000559754 AP3B2Q13367 1082 aa7□□□□□ -1.29
SPG11-218ENST00000559754 GRM2Q14416 872 aa7□□□□□ -1.29
SPG11-218ENST00000559754 TRAIPQ9BWF2 469 aa7□□□□□ -1.29
SPG11-218ENST00000559754 YIPF2Q9BWQ6 316 aa7□□□□□ -1.29
SPG11-218ENST00000559754 TREHO43280 583 aa6.99□□□□□ -1.29
SPG11-218ENST00000559754 DLGAP3O95886 979 aa6.99□□□□□ -1.29
SPG11-218ENST00000559754 XRCC5P13010 732 aaKnown RBP6.99□□□□□ -1.29
SPG11-218ENST00000559754 RXRBP28702 533 aa6.99□□□□□ -1.29
SPG11-218ENST00000559754 GRIK1P39086 918 aa6.99□□□□□ -1.29
SPG11-218ENST00000559754 USP11P51784 963 aa6.99□□□□□ -1.29
SPG11-218ENST00000559754 SOX4Q06945 474 aaPredicted RBP6.99□□□□□ -1.29
SPG11-218ENST00000559754 DSC3Q14574 896 aa6.99□□□□□ -1.29
SPG11-218ENST00000559754 GIMAP7Q8NHV1 300 aa6.99□□□□□ -1.29
SPG11-218ENST00000559754 EPS8L3Q8TE67 593 aaKnown RBP6.99□□□□□ -1.29
SPG11-218ENST00000559754 ENOX2Q16206 610 aaKnown RBP6.98□□□□□ -1.29
SPG11-218ENST00000559754 DTHD1Q6ZMT9 781 aa6.98□□□□□ -1.29
SPG11-218ENST00000559754 RAD18Q9NS91 495 aa6.98□□□□□ -1.29
SPG11-218ENST00000559754 PNMA6FA0A0J9YX94 578 aa6.97□□□□□ -1.29
SPG11-218ENST00000559754 COBLO75128 1261 aa6.97□□□□□ -1.29
SPG11-218ENST00000559754 ADH5P11766 374 aa6.97□□□□□ -1.29
SPG11-218ENST00000559754 SGO2Q562F6 1265 aa6.97□□□□□ -1.29
SPG11-218ENST00000559754 INTS5Q6P9B9 1019 aaKnown RBP6.97□□□□□ -1.29
SPG11-218ENST00000559754 PAOXQ6QHF9 649 aa6.97□□□□□ -1.29
SPG11-218ENST00000559754 ZDHHC13Q8IUH4 622 aa6.97□□□□□ -1.29
SPG11-218ENST00000559754 GLIS3Q8NEA6 775 aa6.97□□□□□ -1.29
SPG11-218ENST00000559754 TRIM56Q9BRZ2 755 aaKnown RBP6.97□□□□□ -1.29
SPG11-218ENST00000559754 PCMTD2Q9NV79 361 aa6.97□□□□□ -1.29
SPG11-218ENST00000559754 FAM95CA0A1B0GW59 222 aa6.96□□□□□ -1.3
SPG11-218ENST00000559754 DRD2P14416 443 aa6.96□□□□□ -1.3
SPG11-218ENST00000559754 PPP2R3AQ06190 1150 aa6.96□□□□□ -1.3
SPG11-218ENST00000559754 C2CD4AQ8NCU7 369 aaPredicted RBP6.96□□□□□ -1.3
SPG11-218ENST00000559754 FBF1Q8TES7 1133 aa6.96□□□□□ -1.3
SPG11-218ENST00000559754 ASB16Q96NS5 453 aa6.96□□□□□ -1.3
SPG11-218ENST00000559754 BCO2Q9BYV7 579 aa6.96□□□□□ -1.3
SPG11-218ENST00000559754 TGFB1P01137 390 aa6.95□□□□□ -1.3
SPG11-218ENST00000559754 CD97P48960 835 aa6.95□□□□□ -1.3
SPG11-218ENST00000559754 FCGRTP55899 365 aa6.95□□□□□ -1.3
SPG11-218ENST00000559754 PDE3AQ14432 1141 aa6.95□□□□□ -1.3
SPG11-218ENST00000559754 NFKBIBQ15653 356 aa6.95□□□□□ -1.3
SPG11-218ENST00000559754 SHKBP1Q8TBC3 707 aa6.95□□□□□ -1.3
SPG11-218ENST00000559754 SRCIN1Q9C0H9 1055 aa6.95□□□□□ -1.3
SPG11-218ENST00000559754 GPN3Q9UHW5 284 aaPredicted RBP6.95□□□□□ -1.3
SPG11-218ENST00000559754 SYNGAP1Q96PV0 1343 aa6.95□□□□□ -1.3
SPG11-218ENST00000559754 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.94□□□□□ -1.3
SPG11-218ENST00000559754 CTSBP07858 339 aa6.94□□□□□ -1.3
SPG11-218ENST00000559754 SSTR4P31391 388 aa6.94□□□□□ -1.3
SPG11-218ENST00000559754 MAPK8P45983 427 aa6.94□□□□□ -1.3
SPG11-218ENST00000559754 ATP2B2Q01814 1243 aa6.94□□□□□ -1.3
SPG11-218ENST00000559754 FMR1Q06787 632 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPG11-218ENST00000559754 CPSF6Q16630 551 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPG11-218ENST00000559754 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPG11-218ENST00000559754 AKAP4Q5JQC9 854 aa6.94□□□□□ -1.3
SPG11-218ENST00000559754 ALG1LQ6GMV1 187 aa6.94□□□□□ -1.3
SPG11-218ENST00000559754 PI16Q6UXB8 463 aa6.94□□□□□ -1.3
SPG11-218ENST00000559754 EZH1Q92800 747 aaPredicted RBP6.94□□□□□ -1.3
SPG11-218ENST00000559754 ATG3Q9NT62 314 aa6.94□□□□□ -1.3
SPG11-218ENST00000559754 TMEM39AQ9NV64 488 aa6.94□□□□□ -1.3
SPG11-218ENST00000559754 GIPC1O14908 333 aa6.93□□□□□ -1.3
SPG11-218ENST00000559754 AOC2O75106 756 aa6.93□□□□□ -1.3
SPG11-218ENST00000559754 ZNF157P51786 506 aaPredicted RBP6.93□□□□□ -1.3
SPG11-218ENST00000559754 FAAP100Q0VG06 881 aa6.93□□□□□ -1.3
SPG11-218ENST00000559754 MAP7Q14244 749 aa6.93□□□□□ -1.3
SPG11-218ENST00000559754 CDPF1Q6NVV7 123 aa6.93□□□□□ -1.3
SPG11-218ENST00000559754 DYMQ7RTS9 669 aa6.93□□□□□ -1.3
SPG11-218ENST00000559754 FBLIM1Q8WUP2 373 aa6.93□□□□□ -1.3
SPG11-218ENST00000559754 MFSD14AQ96MC6 490 aa6.93□□□□□ -1.3
SPG11-218ENST00000559754 AP4E1Q9UPM8 1137 aa6.93□□□□□ -1.3
SPG11-218ENST00000559754 ACTL7BQ9Y614 415 aa6.93□□□□□ -1.3
SPG11-218ENST00000559754 PRR19A6NJB7 356 aa6.92□□□□□ -1.3
SPG11-218ENST00000559754 KIAA1324LA8MWY0 1029 aaPredicted RBP6.92□□□□□ -1.3
SPG11-218ENST00000559754 WDR64B1ANS9 1081 aa6.92□□□□□ -1.3
SPG11-218ENST00000559754 ECEL1O95672 775 aa6.92□□□□□ -1.3
SPG11-218ENST00000559754 SLFN14P0C7P3 912 aa6.92□□□□□ -1.3
SPG11-218ENST00000559754 NXPE4Q6UWF7 544 aa6.92□□□□□ -1.3
SPG11-218ENST00000559754 METTL22Q9BUU2 404 aaPredicted RBP6.92□□□□□ -1.3
SPG11-218ENST00000559754 KRT82Q9NSB4 513 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms