RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 CLTCQ00610 1675 aaKnown RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 CFAP73A6NFT4 308 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 SRRM3A6NNA2 597 aaPredicted RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 ALDH3A1P30838 453 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 MAGEA8P43361 318 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 PPFIBP1Q86W92 1011 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 PRPF38AQ8NAV1 312 aaKnown RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 LSM14AQ8ND56 463 aaKnown RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 SMC1BQ8NDV3 1235 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 BPIFA3Q9BQP9 254 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 ALDH8A1Q9H2A2 487 aaPredicted RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 PLCB1Q9NQ66 1216 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 TMEM63CQ9P1W3 806 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 CTTNBP2NLQ9P2B4 639 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 CIDEBQ9UHD4 219 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 WDR37Q9Y2I8 494 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 CHD1O14646 1710 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 TTC21BQ7Z4L5 1316 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 RFX7Q2KHR2 1363 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 DLC1Q96QB1 1528 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 RASSF10A6NK89 507 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 KDM1AO60341 852 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 SMIM24O75264 130 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 E2F6O75461 281 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 GLI2P10070 1586 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 MNX1P50219 401 aaPredicted RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 NEK2P51955 445 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 IRX4P78413 519 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 TYRO3Q06418 890 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 IKQ13123 557 aaPredicted RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 IMMTQ16891 758 aaKnown RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 USH1GQ495M9 461 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 SPTY2D1Q68D10 685 aaPredicted RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 TTC19Q6DKK2 380 aaPredicted RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 CD109Q6YHK3 1445 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 ANKRD23Q86SG2 305 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 USP6NLQ92738 828 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 ZNF653Q96CK0 615 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 HOOK2Q96ED9 719 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 SMC6Q96SB8 1091 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 LLPHQ9BRT6 129 aaKnown RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 EXOC1Q9NV70 894 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 SEPT10Q9P0V9 454 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 SCHIP1Q9P0W5 487 aaPredicted RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 TFIP11Q9UBB9 837 aaKnown RBP2.7□□□□□ -1.98
RGPD1-204ENST00000559485 RIMS2Q9UQ26 1411 aa2.7□□□□□ -1.98
RGPD1-204ENST00000559485 MACROD2A1Z1Q3 448 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 SASH1O94885 1247 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 VIMP08670 466 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PECAM1P16284 738 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 TRIM21P19474 475 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 EPS15P42566 896 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 GJA8P48165 433 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 RBM6P78332 1123 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PSME1Q06323 249 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 TRIM14Q14142 442 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 AFAP1Q8N556 730 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PIP4K2CQ8TBX8 421 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 USP33Q8TEY7 942 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CFAP57Q96MR6 1250 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 BAG1Q99933 345 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PYM1Q9BRP8 204 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CENPKQ9BS16 269 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 UPF3BQ9BZI7 483 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 RBM27Q9P2N5 1060 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 MYO1AQ9UBC5 1043 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 ORC3Q9UBD5 711 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 ATP6V0A2Q9Y487 856 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 SENP3-EIF4A1A0A087X0R7 540 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 E7ENQ6 273 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 GLRX3O76003 335 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 FERP16591 822 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 SDSP20132 328 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 BLVRAP53004 296 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CUL3Q13618 768 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 KBTBD12Q3ZCT8 623 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 ZSCAN25Q6NSZ9 544 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 SLC30A9Q6PML9 568 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 RASEFQ8IZ41 740 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 NME8Q8N427 588 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PPFIBP2Q8ND30 876 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 COG3Q96JB2 828 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 GBP5Q96PP8 586 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CTAGE1Q96RT6 745 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 MAK16Q9BXY0 300 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 GGA2Q9UJY4 613 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 RPAP1Q9BWH6 1393 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 EDC4Q6P2E9 1401 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CTAGE9A4FU28 777 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 LRRIQ3A6PVS8 624 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 STXBP3O00186 592 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 LSM1O15116 133 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 URI1O94763 535 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 MAP4K4O95819 1239 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 ATP5DP30049 168 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 SEMA3FQ13275 785 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 MTMR3Q13615 1198 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 ELF2Q15723 593 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PODNQ7Z5L7 613 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms