RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 PPRC1Q5VV67 1664 aaKnown RBP7.28□□□□□ -1.24
ATXN3-243ENST00000556671 EREGO14944 169 aa7.28□□□□□ -1.24
ATXN3-243ENST00000556671 DDX3YO15523 660 aaKnown RBP7.28□□□□□ -1.24
ATXN3-243ENST00000556671 HYAL3O43820 417 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-243ENST00000556671 USP5P45974 858 aa7.28□□□□□ -1.24
ATXN3-243ENST00000556671 AAMPQ13685 434 aa7.28□□□□□ -1.24
ATXN3-243ENST00000556671 DUOXA2Q1HG44 320 aa7.28□□□□□ -1.24
ATXN3-243ENST00000556671 SNX29Q8TEQ0 813 aa7.28□□□□□ -1.24
ATXN3-243ENST00000556671 RAXQ9Y2V3 346 aa7.28□□□□□ -1.24
ATXN3-243ENST00000556671 PCF11O94913 1555 aaKnown RBP7.28□□□□□ -1.24
ATXN3-243ENST00000556671 GLI2P10070 1586 aa7.28□□□□□ -1.24
ATXN3-243ENST00000556671 MYO5CQ9NQX4 1742 aa7.27□□□□□ -1.25
ATXN3-243ENST00000556671 PHACTR2O75167 634 aa7.27□□□□□ -1.25
ATXN3-243ENST00000556671 ARMC10Q8N2F6 343 aa7.27□□□□□ -1.25
ATXN3-243ENST00000556671 UBASH3BQ8TF42 649 aa7.27□□□□□ -1.25
ATXN3-243ENST00000556671 OSMRQ99650 979 aa7.27□□□□□ -1.25
ATXN3-243ENST00000556671 FOXD3Q9UJU5 478 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-243ENST00000556671 USTQ9Y2C2 406 aa7.27□□□□□ -1.25
ATXN3-243ENST00000556671 ABL1P00519 1130 aa7.26□□□□□ -1.25
ATXN3-243ENST00000556671 EDN3P14138 238 aa7.26□□□□□ -1.25
ATXN3-243ENST00000556671 ZNF211Q13398 564 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-243ENST00000556671 UVSSAQ2YD98 709 aa7.26□□□□□ -1.25
ATXN3-243ENST00000556671 GJD3Q8N144 294 aa7.26□□□□□ -1.25
ATXN3-243ENST00000556671 NXPE3Q969Y0 559 aa7.26□□□□□ -1.25
ATXN3-243ENST00000556671 FAM46AQ96IP4 442 aaKnown RBP7.26□□□□□ -1.25
ATXN3-243ENST00000556671 ZKSCAN3Q9BRR0 538 aa7.26□□□□□ -1.25
ATXN3-243ENST00000556671 ANO2Q9NQ90 1003 aa7.26□□□□□ -1.25
ATXN3-243ENST00000556671 CCDC87Q9NVE4 849 aa7.26□□□□□ -1.25
ATXN3-243ENST00000556671 TEX14Q8IWB6 1497 aa7.25□□□□□ -1.25
ATXN3-243ENST00000556671 DHX15O43143 795 aaKnown RBP7.25□□□□□ -1.25
ATXN3-243ENST00000556671 NBPF11Q86T75 865 aa7.25□□□□□ -1.25
ATXN3-243ENST00000556671 EGFL7Q9UHF1 273 aa7.25□□□□□ -1.25
ATXN3-243ENST00000556671 CASKIN1Q8WXD9 1431 aa7.25□□□□□ -1.25
ATXN3-243ENST00000556671 ABCA9Q8IUA7 1624 aa7.24□□□□□ -1.25
ATXN3-243ENST00000556671 GSC2O15499 205 aa7.24□□□□□ -1.25
ATXN3-243ENST00000556671 VN1R5Q7Z5H4 357 aa7.24□□□□□ -1.25
ATXN3-243ENST00000556671 SLC7A3Q8WY07 619 aa7.24□□□□□ -1.25
ATXN3-243ENST00000556671 BSNDQ8WZ55 320 aa7.24□□□□□ -1.25
ATXN3-243ENST00000556671 UTP4Q969X6 686 aaKnown RBP7.24□□□□□ -1.25
ATXN3-243ENST00000556671 BHLHE41Q9C0J9 482 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-243ENST00000556671 STOML1Q9UBI4 398 aa7.24□□□□□ -1.25
ATXN3-243ENST00000556671 AMOTL2Q9Y2J4 779 aa7.24□□□□□ -1.25
ATXN3-243ENST00000556671 KIF14Q15058 1648 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 IGLV1-40P01703 118 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 ARL4DP49703 201 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 NLRP12P59046 1061 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 C19orf57Q0VDD7 668 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 PEAR1Q5VY43 1037 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-243ENST00000556671 HGSNATQ68CP4 663 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 B4GALNT3Q6L9W6 998 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 MYRFLQ96LU7 910 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 KRTAP4-8Q9BYQ9 185 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 RNF208Q9H0X6 261 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 ZFYVE28Q9HCC9 887 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 CDC42BPBQ9Y5S2 1711 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 CCDC18Q5T9S5 1454 aa7.23□□□□□ -1.25
ATXN3-243ENST00000556671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.22□□□□□ -1.25
ATXN3-243ENST00000556671 MTUS2Q5JR59 1369 aa7.22□□□□□ -1.25
ATXN3-243ENST00000556671 CDC42BPAQ5VT25 1732 aa7.22□□□□□ -1.25
ATXN3-243ENST00000556671 TTC37Q6PGP7 1564 aa7.22□□□□□ -1.25
ATXN3-243ENST00000556671 SOX1O00570 391 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-243ENST00000556671 ICMTO60725 284 aa7.22□□□□□ -1.25
ATXN3-243ENST00000556671 RAPGEF3O95398 923 aa7.22□□□□□ -1.25
ATXN3-243ENST00000556671 EFCAB2Q5VUJ9 269 aa7.22□□□□□ -1.25
ATXN3-243ENST00000556671 ANKRD34AQ69YU3 496 aa7.22□□□□□ -1.25
ATXN3-243ENST00000556671 LATS2Q9NRM7 1088 aa7.22□□□□□ -1.25
ATXN3-243ENST00000556671 FYCO1Q9BQS8 1478 aa7.22□□□□□ -1.25
ATXN3-243ENST00000556671 IKBKEQ14164 716 aa7.21□□□□□ -1.26
ATXN3-243ENST00000556671 ECM1Q16610 540 aa7.21□□□□□ -1.26
ATXN3-243ENST00000556671 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-243ENST00000556671 RUSC1Q9BVN2 902 aa7.21□□□□□ -1.26
ATXN3-243ENST00000556671 SOX17Q9H6I2 414 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-243ENST00000556671 ARID4BQ4LE39 1312 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-243ENST00000556671 TROQ12816 1431 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-243ENST00000556671 MEGF11A6BM72 1044 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 PREPP48147 710 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 SERPINB4P48594 390 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 FAM20CQ8IXL6 584 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 ASAP3Q8TDY4 903 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 PSMG3-AS1Q96PY0 264 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 C7orf69Q9H7B7 122 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 TIMELESSQ9UNS1 1208 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 ARHGAP5Q13017 1502 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 MAGI3Q5TCQ9 1506 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 CFAP74Q9C0B2 1584 aa7.2□□□□□ -1.26
ATXN3-243ENST00000556671 FANCAO15360 1455 aa7.19□□□□□ -1.26
ATXN3-243ENST00000556671 SUPT6HQ7KZ85 1726 aaKnown RBP7.19□□□□□ -1.26
ATXN3-243ENST00000556671 H3BRB1 525 aa7.19□□□□□ -1.26
ATXN3-243ENST00000556671 SART1O43290 800 aaKnown RBP7.19□□□□□ -1.26
ATXN3-243ENST00000556671 ESRRAP11474 423 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-243ENST00000556671 CD97P48960 835 aa7.19□□□□□ -1.26
ATXN3-243ENST00000556671 NFIAQ12857 509 aa7.19□□□□□ -1.26
ATXN3-243ENST00000556671 CLEC10AQ8IUN9 316 aa7.19□□□□□ -1.26
ATXN3-243ENST00000556671 TRIM42Q8IWZ5 723 aa7.19□□□□□ -1.26
ATXN3-243ENST00000556671 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
ATXN3-243ENST00000556671 HIF3AQ9Y2N7 669 aa7.19□□□□□ -1.26
ATXN3-243ENST00000556671 AKNAQ7Z591 1439 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 HMX2A2RU54 273 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 POLR3DP05423 398 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-243ENST00000556671 BMP3P12645 472 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms