RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 DBNDD2Q9BQY9 259 aa9.33□□□□□ -0.92
SYNE2-220ENST00000555612 BCCIPQ9P287 314 aaKnown RBP eCLIP9.33□□□□□ -0.92
SYNE2-220ENST00000555612 CSADQ9Y600 493 aa9.33□□□□□ -0.92
SYNE2-220ENST00000555612 B4E1Z4 1266 aa9.33□□□□□ -0.92
SYNE2-220ENST00000555612 TNNI3KQ59H18 835 aa9.33□□□□□ -0.92
SYNE2-220ENST00000555612 CREB3L3Q68CJ9 461 aa9.33□□□□□ -0.92
SYNE2-220ENST00000555612 OTUD6BQ8N6M0 293 aa9.33□□□□□ -0.92
SYNE2-220ENST00000555612 ZNF526Q8TF50 670 aaPredicted RBP9.33□□□□□ -0.92
SYNE2-220ENST00000555612 FPGT-TNNI3KV9GXZ4 949 aa9.33□□□□□ -0.92
SYNE2-220ENST00000555612 EDC4Q6P2E9 1401 aaKnown RBP9.33□□□□□ -0.92
SYNE2-220ENST00000555612 ZNF165P49910 485 aa9.32□□□□□ -0.92
SYNE2-220ENST00000555612 UBE4AQ14139 1066 aa9.32□□□□□ -0.92
SYNE2-220ENST00000555612 USP48Q86UV5 1035 aa9.32□□□□□ -0.92
SYNE2-220ENST00000555612 ARID5AQ03989 594 aa9.32□□□□□ -0.92
SYNE2-220ENST00000555612 RBM28Q9NW13 759 aaKnown RBP9.32□□□□□ -0.92
SYNE2-220ENST00000555612 TMEM94Q12767 1356 aa9.32□□□□□ -0.92
SYNE2-220ENST00000555612 COL17A1Q9UMD9 1497 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-220ENST00000555612 DDX39AO00148 427 aaKnown RBP9.32□□□□□ -0.92
SYNE2-220ENST00000555612 PER1O15534 1290 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-220ENST00000555612 MRPS27Q92552 414 aaKnown RBP9.32□□□□□ -0.92
SYNE2-220ENST00000555612 PAGR1Q9BTK6 254 aa9.32□□□□□ -0.92
SYNE2-220ENST00000555612 EEF2P13639 858 aaKnown RBP9.32□□□□□ -0.92
SYNE2-220ENST00000555612 IL13P35225 146 aa9.32□□□□□ -0.92
SYNE2-220ENST00000555612 APBB1IPQ7Z5R6 666 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-220ENST00000555612 SLC1A4P43007 532 aa9.32□□□□□ -0.92
SYNE2-220ENST00000555612 LRRC45Q96CN5 670 aa9.32□□□□□ -0.92
SYNE2-220ENST00000555612 MAP2K1Q02750 393 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-220ENST00000555612 CCDC117Q8IWD4 279 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-220ENST00000555612 TSNARE1Q96NA8 513 aa9.32□□□□□ -0.92
SYNE2-220ENST00000555612 USH1GQ495M9 461 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 SPECC1Q5M775 1068 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 DTHD1Q6ZMT9 781 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 TGFBRAP1Q8WUH2 860 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 TESK2Q96S53 571 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 GBP3Q9H0R5 595 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 JADE2Q9NQC1 790 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 CNPY2Q9Y2B0 182 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 ATP7AQ04656 1500 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 KIF2AO00139 706 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-220ENST00000555612 KIF4AO95239 1232 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 ARL1P40616 181 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-220ENST00000555612 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 LPIN2Q92539 896 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 HELLSQ9NRZ9 838 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 TTF2Q9UNY4 1162 aaKnown RBP9.31□□□□□ -0.92
SYNE2-220ENST00000555612 CCDC169A6NNP5 214 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 TMEM110-MUSTN1A8MSY1 372 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 UBE2HP62256 183 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 DHX32Q7L7V1 743 aaKnown RBP9.31□□□□□ -0.92
SYNE2-220ENST00000555612 EIF2AK4Q9P2K8 1649 aaKnown RBP9.31□□□□□ -0.92
SYNE2-220ENST00000555612 GCOM1H8Y6P7 765 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-220ENST00000555612 MYZAPP0CAP1 466 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 RPS8P62241 208 aaKnown RBP9.31□□□□□ -0.92
SYNE2-220ENST00000555612 USP40Q9NVE5 1235 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 CTTNBP2Q8WZ74 1663 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 KIF22Q14807 665 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 ZFYVE16Q7Z3T8 1539 aa9.31□□□□□ -0.92
SYNE2-220ENST00000555612 ERVV-2B6SEH9 535 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 BIRC3Q13489 604 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 NAA15Q9BXJ9 866 aaKnown RBP9.3□□□□□ -0.92
SYNE2-220ENST00000555612 SPTLC2O15270 562 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 ZNF174Q15697 407 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 MFSD14BQ5SR56 506 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 GIMAP6Q6P9H5 292 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 KIF18AQ8NI77 898 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 DCPSQ96C86 337 aaKnown RBP9.3□□□□□ -0.92
SYNE2-220ENST00000555612 SUCLG2Q96I99 432 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 NAP1L4Q99733 375 aaKnown RBP9.3□□□□□ -0.92
SYNE2-220ENST00000555612 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.3□□□□□ -0.92
SYNE2-220ENST00000555612 TCP10L2B9ZVM9 353 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 IFI16Q16666 785 aaKnown RBP9.3□□□□□ -0.92
SYNE2-220ENST00000555612 SPATA5Q8NB90 893 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 BLMP54132 1417 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-220ENST00000555612 UQCRHLA0A096LP55 91 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 UQCRHP07919 91 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 CCT6AP40227 531 aaKnown RBP9.3□□□□□ -0.92
SYNE2-220ENST00000555612 GRIPAP1Q4V328 841 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 SPOUT1Q5T280 376 aaKnown RBP9.3□□□□□ -0.92
SYNE2-220ENST00000555612 EP400NLQ6ZTU2 488 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 UIMC1Q96RL1 719 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 TRIM6Q9C030 488 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-220ENST00000555612 AZI2Q9H6S1 392 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 DCTPP1Q9H773 170 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 USP19O94966 1318 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 TNFAIP1Q13829 316 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 USPL1Q5W0Q7 1092 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 MROH5Q6ZUA9 1318 aa9.3□□□□□ -0.92
SYNE2-220ENST00000555612 FSD2A1L4K1 749 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 SULF1Q8IWU6 871 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 TBC1D22AQ8WUA7 517 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 IKBKGQ9Y6K9 419 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 CNGA1P29973 690 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 SCNN1DP51172 638 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 GSDMDP57764 484 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 KIAA0753Q2KHM9 967 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 MAP9Q49MG5 647 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 TMCO3Q6UWJ1 677 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 KIAA0825Q8IV33 1275 aa9.29□□□□□ -0.92
SYNE2-220ENST00000555612 NDUFB9Q9Y6M9 179 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms