RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 DIP2AQ14689 1571 aa8.75□□□□□ -1.01
LINC00643-203ENST00000555518 PTPRUQ92729 1446 aa8.75□□□□□ -1.01
LINC00643-203ENST00000555518 POM121CA8CG34 1229 aa8.75□□□□□ -1.01
LINC00643-203ENST00000555518 IGFBP4P22692 258 aa8.75□□□□□ -1.01
LINC00643-203ENST00000555518 DDX10Q13206 875 aaKnown RBP8.75□□□□□ -1.01
LINC00643-203ENST00000555518 ELMSAN1Q6PJG2 1045 aa8.75□□□□□ -1.01
LINC00643-203ENST00000555518 LARP1Q6PKG0 1096 aaKnown RBP8.75□□□□□ -1.01
LINC00643-203ENST00000555518 TXNDC2Q86VQ3 553 aa8.75□□□□□ -1.01
LINC00643-203ENST00000555518 DMGDHQ9UI17 866 aaKnown RBP8.75□□□□□ -1.01
LINC00643-203ENST00000555518 TULP4Q9NRJ4 1543 aa8.75□□□□□ -1.01
LINC00643-203ENST00000555518 TRAK1Q9UPV9 953 aa8.74□□□□□ -1.01
LINC00643-203ENST00000555518 CENPJQ9HC77 1338 aaPredicted RBP8.74□□□□□ -1.01
LINC00643-203ENST00000555518 MYOM1P52179 1685 aa8.73□□□□□ -1.01
LINC00643-203ENST00000555518 CPB1P15086 417 aa8.73□□□□□ -1.01
LINC00643-203ENST00000555518 INPP5BP32019 993 aa8.73□□□□□ -1.01
LINC00643-203ENST00000555518 GPLD1P80108 840 aa8.73□□□□□ -1.01
LINC00643-203ENST00000555518 DHX32Q7L7V1 743 aaKnown RBP8.73□□□□□ -1.01
LINC00643-203ENST00000555518 KRTAP1-3Q8IUG1 177 aa8.73□□□□□ -1.01
LINC00643-203ENST00000555518 HINFPQ9BQA5 517 aa8.73□□□□□ -1.01
LINC00643-203ENST00000555518 LPIN3Q9BQK8 851 aa8.73□□□□□ -1.01
LINC00643-203ENST00000555518 XRN1Q8IZH2 1706 aaKnown RBP8.73□□□□□ -1.01
LINC00643-203ENST00000555518 PLEKHH1Q9ULM0 1364 aa8.73□□□□□ -1.01
LINC00643-203ENST00000555518 LMTK3Q96Q04 1460 aa8.72□□□□□ -1.01
LINC00643-203ENST00000555518 IREB2P48200 963 aaKnown RBP8.72□□□□□ -1.01
LINC00643-203ENST00000555518 ARSDP51689 593 aa8.72□□□□□ -1.01
LINC00643-203ENST00000555518 SRA1Q9HD15 236 aaKnown RBP8.72□□□□□ -1.01
LINC00643-203ENST00000555518 EID1Q9Y6B2 187 aa8.72□□□□□ -1.01
LINC00643-203ENST00000555518 FAM135BQ49AJ0 1406 aa8.71□□□□□ -1.01
LINC00643-203ENST00000555518 NOS3P29474 1203 aa8.71□□□□□ -1.02
LINC00643-203ENST00000555518 IDH3AP50213 366 aa8.71□□□□□ -1.02
LINC00643-203ENST00000555518 GRIK5Q16478 980 aa8.71□□□□□ -1.02
LINC00643-203ENST00000555518 PERM1Q5SV97 790 aa8.71□□□□□ -1.02
LINC00643-203ENST00000555518 KRTAP4-12Q9BQ66 201 aa8.71□□□□□ -1.02
LINC00643-203ENST00000555518 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.71□□□□□ -1.02
LINC00643-203ENST00000555518 TBX22Q9Y458 520 aa8.71□□□□□ -1.02
LINC00643-203ENST00000555518 ROBO2Q9HCK4 1378 aa8.71□□□□□ -1.02
LINC00643-203ENST00000555518 NPHP4O75161 1426 aaPredicted RBP8.71□□□□□ -1.02
LINC00643-203ENST00000555518 PTCH1Q13635 1447 aa8.71□□□□□ -1.02
LINC00643-203ENST00000555518 NRLP54845 237 aa8.7□□□□□ -1.02
LINC00643-203ENST00000555518 TMF1P82094 1093 aa8.7□□□□□ -1.02
LINC00643-203ENST00000555518 LCE3BQ5TA77 95 aa8.7□□□□□ -1.02
LINC00643-203ENST00000555518 ANKLE2Q86XL3 938 aa8.7□□□□□ -1.02
LINC00643-203ENST00000555518 SLC26A8Q96RN1 970 aa8.7□□□□□ -1.02
LINC00643-203ENST00000555518 STK26Q9P289 416 aa8.7□□□□□ -1.02
LINC00643-203ENST00000555518 BCS1LQ9Y276 419 aa8.7□□□□□ -1.02
LINC00643-203ENST00000555518 RARAP10276 462 aa8.69□□□□□ -1.02
LINC00643-203ENST00000555518 PRR23CQ6ZRP0 262 aa8.69□□□□□ -1.02
LINC00643-203ENST00000555518 MAP4K3Q8IVH8 894 aa8.69□□□□□ -1.02
LINC00643-203ENST00000555518 PRAM1Q96QH2 718 aa8.69□□□□□ -1.02
LINC00643-203ENST00000555518 TFIP11Q9UBB9 837 aaKnown RBP8.69□□□□□ -1.02
LINC00643-203ENST00000555518 MAFBQ9Y5Q3 323 aaPredicted RBP8.69□□□□□ -1.02
LINC00643-203ENST00000555518 PIK3R4Q99570 1358 aa8.69□□□□□ -1.02
LINC00643-203ENST00000555518 ADGRB2O60241 1585 aa8.69□□□□□ -1.02
LINC00643-203ENST00000555518 NWD1Q149M9 1564 aa8.69□□□□□ -1.02
LINC00643-203ENST00000555518 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.68□□□□□ -1.02
LINC00643-203ENST00000555518 CACTIN-AS1Q8N1I8 211 aa8.68□□□□□ -1.02
LINC00643-203ENST00000555518 TMEM130Q8N3G9 435 aa8.68□□□□□ -1.02
LINC00643-203ENST00000555518 MRPL18Q9H0U6 180 aaKnown RBP8.68□□□□□ -1.02
LINC00643-203ENST00000555518 CHD2O14647 1828 aaKnown RBP8.68□□□□□ -1.02
LINC00643-203ENST00000555518 DLL1O00548 723 aa8.67□□□□□ -1.02
LINC00643-203ENST00000555518 FOXO3O43524 673 aa8.67□□□□□ -1.02
LINC00643-203ENST00000555518 WAPLQ7Z5K2 1190 aa8.67□□□□□ -1.02
LINC00643-203ENST00000555518 DZIP1LQ8IYY4 767 aaKnown RBP8.67□□□□□ -1.02
LINC00643-203ENST00000555518 VTI1AQ96AJ9 217 aa8.67□□□□□ -1.02
LINC00643-203ENST00000555518 PUS7Q96PZ0 661 aaKnown RBP8.67□□□□□ -1.02
LINC00643-203ENST00000555518 RBSNQ9H1K0 784 aa8.67□□□□□ -1.02
LINC00643-203ENST00000555518 AKTIPQ9H8T0 292 aa8.67□□□□□ -1.02
LINC00643-203ENST00000555518 ZFATQ9P243 1243 aa8.67□□□□□ -1.02
LINC00643-203ENST00000555518 STRCQ7RTU9 1775 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 FAM196BA6NMK8 535 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 ZBTB42B2RXF5 422 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 MICAL2O94851 1124 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 EGFRP00533 1210 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 TARSP26639 723 aaKnown RBP8.66□□□□□ -1.02
LINC00643-203ENST00000555518 DPYDQ12882 1025 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 PTK7Q13308 1070 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 SAFB2Q14151 953 aaKnown RBP eCLIP8.66□□□□□ -1.02
LINC00643-203ENST00000555518 C11orf91Q3C1V1 193 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 IFT43Q96FT9 208 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 MYO19Q96H55 970 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 SMG9Q9H0W8 520 aaKnown RBP8.66□□□□□ -1.02
LINC00643-203ENST00000555518 TLR7Q9NYK1 1049 aaKnown RBP8.66□□□□□ -1.02
LINC00643-203ENST00000555518 AMOTL2Q9Y2J4 779 aa8.66□□□□□ -1.02
LINC00643-203ENST00000555518 EVC2Q86UK5 1308 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 BTBD11A6QL63 1104 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 GSC2O15499 205 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 EIF2AK2P19525 551 aaKnown RBP8.65□□□□□ -1.02
LINC00643-203ENST00000555518 GRNP28799 593 aaKnown RBP8.65□□□□□ -1.02
LINC00643-203ENST00000555518 HSPA2P54652 639 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 DGKZQ13574 1117 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 CDCA8Q53HL2 280 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 KRT25Q7Z3Z0 450 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 GLMNQ92990 594 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 MEGF10Q96KG7 1140 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 POLR3GLQ9BT43 218 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 MUC3BQ9H195 1237 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 GOLGA2P5Q9HBQ8 144 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 PCMTD2Q9NV79 361 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 KLK14Q9P0G3 267 aa8.65□□□□□ -1.02
LINC00643-203ENST00000555518 CD163L1Q9NR16 1453 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms