RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 HP1BP3Q5SSJ5 553 aaPredicted RBP9.34□□□□□ -0.91
SEC23A-209ENST00000555363 DDX54Q8TDD1 881 aaKnown RBP9.34□□□□□ -0.91
SEC23A-209ENST00000555363 CLEC4MQ9H2X3 399 aaPredicted RBP9.34□□□□□ -0.91
SEC23A-209ENST00000555363 RAD18Q9NS91 495 aa9.34□□□□□ -0.91
SEC23A-209ENST00000555363 A0A1W2PP55 124 aa9.33□□□□□ -0.92
SEC23A-209ENST00000555363 WNT11O96014 354 aa9.33□□□□□ -0.92
SEC23A-209ENST00000555363 CYP11A1P05108 521 aa9.33□□□□□ -0.92
SEC23A-209ENST00000555363 GALNT12Q8IXK2 581 aa9.33□□□□□ -0.92
SEC23A-209ENST00000555363 TMC1Q8TDI8 760 aa9.33□□□□□ -0.92
SEC23A-209ENST00000555363 FBLIM1Q8WUP2 373 aa9.33□□□□□ -0.92
SEC23A-209ENST00000555363 KRTAP9-2Q9BYQ4 174 aa9.33□□□□□ -0.92
SEC23A-209ENST00000555363 PIM2Q9P1W9 311 aa9.33□□□□□ -0.92
SEC23A-209ENST00000555363 TIAF1O95411 115 aa9.32□□□□□ -0.92
SEC23A-209ENST00000555363 DLGAP3O95886 979 aa9.32□□□□□ -0.92
SEC23A-209ENST00000555363 SERPINB4P48594 390 aa9.32□□□□□ -0.92
SEC23A-209ENST00000555363 PDE3BQ13370 1112 aa9.32□□□□□ -0.92
SEC23A-209ENST00000555363 SPRED3Q2MJR0 410 aa9.32□□□□□ -0.92
SEC23A-209ENST00000555363 CCNJLQ8IV13 435 aa9.32□□□□□ -0.92
SEC23A-209ENST00000555363 EHD4Q9H223 541 aa9.32□□□□□ -0.92
SEC23A-209ENST00000555363 ZFYVE1Q9HBF4 777 aa9.32□□□□□ -0.92
SEC23A-209ENST00000555363 OAS3Q9Y6K5 1087 aaKnown RBP9.32□□□□□ -0.92
SEC23A-209ENST00000555363 SPINK2P20155 84 aa9.31□□□□□ -0.92
SEC23A-209ENST00000555363 SOX4Q06945 474 aaPredicted RBP9.31□□□□□ -0.92
SEC23A-209ENST00000555363 POU4F3Q15319 338 aa9.31□□□□□ -0.92
SEC23A-209ENST00000555363 DTX1Q86Y01 620 aa9.31□□□□□ -0.92
SEC23A-209ENST00000555363 COL17A1Q9UMD9 1497 aaPredicted RBP9.31□□□□□ -0.92
SEC23A-209ENST00000555363 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.3□□□□□ -0.92
SEC23A-209ENST00000555363 MAOBP27338 520 aa9.3□□□□□ -0.92
SEC23A-209ENST00000555363 GRIA4P48058 902 aa9.3□□□□□ -0.92
SEC23A-209ENST00000555363 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
SEC23A-209ENST00000555363 CORO1BQ9BR76 489 aa9.3□□□□□ -0.92
SEC23A-209ENST00000555363 ANGEL1Q9UNK9 670 aaKnown RBP9.3□□□□□ -0.92
SEC23A-209ENST00000555363 F13BP05160 661 aa9.29□□□□□ -0.92
SEC23A-209ENST00000555363 ZNF423Q2M1K9 1284 aa9.29□□□□□ -0.92
SEC23A-209ENST00000555363 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
SEC23A-209ENST00000555363 USPL1Q5W0Q7 1092 aa9.29□□□□□ -0.92
SEC23A-209ENST00000555363 CDPF1Q6NVV7 123 aa9.29□□□□□ -0.92
SEC23A-209ENST00000555363 METTL22Q9BUU2 404 aaPredicted RBP9.29□□□□□ -0.92
SEC23A-209ENST00000555363 KRTAP9-6A0A140TA67 174 aa9.28□□□□□ -0.92
SEC23A-209ENST00000555363 CPNE3O75131 537 aaKnown RBP9.28□□□□□ -0.92
SEC23A-209ENST00000555363 ADH5P11766 374 aa9.28□□□□□ -0.92
SEC23A-209ENST00000555363 RAB6AP20340 208 aa9.28□□□□□ -0.92
SEC23A-209ENST00000555363 HOXA10P31260 410 aaPredicted RBP9.28□□□□□ -0.92
SEC23A-209ENST00000555363 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
SEC23A-209ENST00000555363 C2CD4AQ8NCU7 369 aaPredicted RBP9.28□□□□□ -0.92
SEC23A-209ENST00000555363 TCF12Q99081 682 aa9.28□□□□□ -0.92
SEC23A-209ENST00000555363 AP4E1Q9UPM8 1137 aa9.28□□□□□ -0.92
SEC23A-209ENST00000555363 TAL1P17542 331 aaPredicted RBP9.27□□□□□ -0.93
SEC23A-209ENST00000555363 KIAA0319Q5VV43 1072 aa9.27□□□□□ -0.93
SEC23A-209ENST00000555363 ADAMTS4O75173 837 aa9.26□□□□□ -0.93
SEC23A-209ENST00000555363 GADD45BO75293 160 aaPredicted RBP9.26□□□□□ -0.93
SEC23A-209ENST00000555363 ORC1Q13415 861 aa9.26□□□□□ -0.93
SEC23A-209ENST00000555363 MAP7Q14244 749 aa9.26□□□□□ -0.93
SEC23A-209ENST00000555363 PDE3AQ14432 1141 aa9.26□□□□□ -0.93
SEC23A-209ENST00000555363 CPSF6Q16630 551 aaKnown RBP eCLIP9.26□□□□□ -0.93
SEC23A-209ENST00000555363 NPHS2Q9NP85 383 aa9.26□□□□□ -0.93
SEC23A-209ENST00000555363 PATL2C9JE40 543 aaKnown RBP9.25□□□□□ -0.93
SEC23A-209ENST00000555363 CYP26A1O43174 497 aa9.25□□□□□ -0.93
SEC23A-209ENST00000555363 FOSL1P15407 271 aa9.25□□□□□ -0.93
SEC23A-209ENST00000555363 GZF1Q9H116 711 aaPredicted RBP9.25□□□□□ -0.93
SEC23A-209ENST00000555363 ACTL7BQ9Y614 415 aa9.25□□□□□ -0.93
SEC23A-209ENST00000555363 TXKP42681 527 aa9.24□□□□□ -0.93
SEC23A-209ENST00000555363 DUSP27Q5VZP5 1158 aa9.24□□□□□ -0.93
SEC23A-209ENST00000555363 NRSN2Q9GZP1 204 aa9.24□□□□□ -0.93
SEC23A-209ENST00000555363 ZNF576Q9H609 170 aa9.24□□□□□ -0.93
SEC23A-209ENST00000555363 PRKAG2Q9UGJ0 569 aa9.24□□□□□ -0.93
SEC23A-209ENST00000555363 NFICP08651 508 aa9.23□□□□□ -0.93
SEC23A-209ENST00000555363 ASPAP45381 313 aa9.23□□□□□ -0.93
SEC23A-209ENST00000555363 ARHGAP4P98171 946 aa9.23□□□□□ -0.93
SEC23A-209ENST00000555363 TMCO4Q5TGY1 634 aa9.23□□□□□ -0.93
SEC23A-209ENST00000555363 ZAR1Q86SH2 424 aa9.23□□□□□ -0.93
SEC23A-209ENST00000555363 CITED4Q96RK1 184 aa9.23□□□□□ -0.93
SEC23A-209ENST00000555363 NIF3L1Q9GZT8 377 aa9.23□□□□□ -0.93
SEC23A-209ENST00000555363 BRD1O95696 1058 aa9.22□□□□□ -0.93
SEC23A-209ENST00000555363 B3GALT4O96024 378 aa9.22□□□□□ -0.93
SEC23A-209ENST00000555363 CTSBP07858 339 aa9.22□□□□□ -0.93
SEC23A-209ENST00000555363 EZH1Q92800 747 aaPredicted RBP9.22□□□□□ -0.93
SEC23A-209ENST00000555363 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.21□□□□□ -0.94
SEC23A-209ENST00000555363 ADMP35318 185 aa9.21□□□□□ -0.94
SEC23A-209ENST00000555363 AP3B2Q13367 1082 aa9.21□□□□□ -0.94
SEC23A-209ENST00000555363 SHISA5Q8N114 240 aa9.21□□□□□ -0.94
SEC23A-209ENST00000555363 CCER1Q8TC90 406 aaPredicted RBP9.21□□□□□ -0.94
SEC23A-209ENST00000555363 CCDC74AQ96AQ1 378 aa9.21□□□□□ -0.94
SEC23A-209ENST00000555363 FAM129BQ96TA1 746 aa9.21□□□□□ -0.94
SEC23A-209ENST00000555363 LRRC4CQ9HCJ2 640 aa9.21□□□□□ -0.94
SEC23A-209ENST00000555363 TRAK1Q9UPV9 953 aa9.21□□□□□ -0.94
SEC23A-209ENST00000555363 FAM170BA6NMN3 283 aa9.2□□□□□ -0.94
SEC23A-209ENST00000555363 EIF1AYO14602 144 aaKnown RBP9.2□□□□□ -0.94
SEC23A-209ENST00000555363 ECEL1O95672 775 aa9.2□□□□□ -0.94
SEC23A-209ENST00000555363 ITPKAP23677 461 aa9.2□□□□□ -0.94
SEC23A-209ENST00000555363 ZNF157P51786 506 aaPredicted RBP9.2□□□□□ -0.94
SEC23A-209ENST00000555363 HNRNPUQ00839 825 aaKnown RBP eCLIP9.2□□□□□ -0.94
SEC23A-209ENST00000555363 CYP27A1Q02318 531 aa9.2□□□□□ -0.94
SEC23A-209ENST00000555363 KCNA1Q09470 495 aa9.2□□□□□ -0.94
SEC23A-209ENST00000555363 ECM1Q16610 540 aa9.2□□□□□ -0.94
SEC23A-209ENST00000555363 TP53INP2Q8IXH6 220 aa9.2□□□□□ -0.94
SEC23A-209ENST00000555363 TRIM56Q9BRZ2 755 aaKnown RBP9.2□□□□□ -0.94
SEC23A-209ENST00000555363 DNAJC25Q9H1X3 360 aa9.2□□□□□ -0.94
SEC23A-209ENST00000555363 GOLGA2P5Q9HBQ8 144 aa9.2□□□□□ -0.94
SEC23A-209ENST00000555363 DAGLAQ9Y4D2 1042 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms