RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 TOGARAM1Q9Y4F4 1720 aa6.42□□□□□ -1.38
ATXN3-231ENST00000554994 MAP2P11137 1827 aaKnown RBP6.41□□□□□ -1.38
ATXN3-231ENST00000554994 BNIP3LO60238 219 aa6.41□□□□□ -1.38
ATXN3-231ENST00000554994 MMP10P09238 476 aa6.41□□□□□ -1.38
ATXN3-231ENST00000554994 FBXO45P0C2W1 286 aa6.41□□□□□ -1.38
ATXN3-231ENST00000554994 HSPA5P11021 654 aaKnown RBP6.41□□□□□ -1.38
ATXN3-231ENST00000554994 DGKGP49619 791 aa6.41□□□□□ -1.38
ATXN3-231ENST00000554994 CNGB1Q14028 1251 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-231ENST00000554994 UBAP2LQ14157 1087 aaKnown RBP6.41□□□□□ -1.38
ATXN3-231ENST00000554994 GNASQ5JWF2 1037 aa6.41□□□□□ -1.38
ATXN3-231ENST00000554994 RNF135Q8IUD6 432 aa6.41□□□□□ -1.38
ATXN3-231ENST00000554994 TERF2IPQ9NYB0 399 aa6.41□□□□□ -1.38
ATXN3-231ENST00000554994 KTN1Q86UP2 1357 aaKnown RBP6.41□□□□□ -1.38
ATXN3-231ENST00000554994 IL2RAP01589 272 aa6.4□□□□□ -1.38
ATXN3-231ENST00000554994 MSX1P28360 303 aa6.4□□□□□ -1.38
ATXN3-231ENST00000554994 CDCA8Q53HL2 280 aa6.4□□□□□ -1.38
ATXN3-231ENST00000554994 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
ATXN3-231ENST00000554994 ARHGEF25Q86VW2 580 aa6.4□□□□□ -1.38
ATXN3-231ENST00000554994 FLAD1Q8NFF5 587 aa6.4□□□□□ -1.38
ATXN3-231ENST00000554994 ESYT1Q9BSJ8 1104 aa6.4□□□□□ -1.38
ATXN3-231ENST00000554994 TRIM34Q9BYJ4 488 aa6.4□□□□□ -1.38
ATXN3-231ENST00000554994 ANKRD36BQ8N2N9 1353 aa6.4□□□□□ -1.39
ATXN3-231ENST00000554994 LTN1O94822 1766 aa6.39□□□□□ -1.39
ATXN3-231ENST00000554994 VIRMAQ69YN4 1812 aaKnown RBP6.39□□□□□ -1.39
ATXN3-231ENST00000554994 GLTPD2A6NH11 291 aa6.39□□□□□ -1.39
ATXN3-231ENST00000554994 TRAK2O60296 914 aa6.39□□□□□ -1.39
ATXN3-231ENST00000554994 PRKCSHP14314 528 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-231ENST00000554994 TGFB2P61812 414 aa6.39□□□□□ -1.39
ATXN3-231ENST00000554994 GRM1Q13255 1194 aa6.39□□□□□ -1.39
ATXN3-231ENST00000554994 C4orf17Q53FE4 359 aa6.39□□□□□ -1.39
ATXN3-231ENST00000554994 CHSY3Q70JA7 882 aa6.39□□□□□ -1.39
ATXN3-231ENST00000554994 KIF20BQ96Q89 1820 aa6.39□□□□□ -1.39
ATXN3-231ENST00000554994 GNRH1P01148 92 aa6.38□□□□□ -1.39
ATXN3-231ENST00000554994 RFC5P40937 340 aa6.38□□□□□ -1.39
ATXN3-231ENST00000554994 DGKZQ13574 1117 aa6.38□□□□□ -1.39
ATXN3-231ENST00000554994 LBRQ14739 615 aaKnown RBP6.38□□□□□ -1.39
ATXN3-231ENST00000554994 HABP4Q5JVS0 413 aaKnown RBP6.38□□□□□ -1.39
ATXN3-231ENST00000554994 TESK2Q96S53 571 aa6.38□□□□□ -1.39
ATXN3-231ENST00000554994 TTC21BQ7Z4L5 1316 aa6.38□□□□□ -1.39
ATXN3-231ENST00000554994 MON2Q7Z3U7 1717 aa6.38□□□□□ -1.39
ATXN3-231ENST00000554994 KIF13BQ9NQT8 1826 aa6.38□□□□□ -1.39
ATXN3-231ENST00000554994 SBF1O95248 1867 aa6.37□□□□□ -1.39
ATXN3-231ENST00000554994 BRCA1P38398 1863 aaKnown RBP6.37□□□□□ -1.39
ATXN3-231ENST00000554994 ARFGEF1Q9Y6D6 1849 aa6.37□□□□□ -1.39
ATXN3-231ENST00000554994 C4BP0C0L5 1744 aa6.37□□□□□ -1.39
ATXN3-231ENST00000554994 WDR33Q9C0J8 1336 aaKnown RBP6.37□□□□□ -1.39
ATXN3-231ENST00000554994 TMEM88BA6NKF7 163 aa6.37□□□□□ -1.39
ATXN3-231ENST00000554994 ARAFP10398 606 aa6.37□□□□□ -1.39
ATXN3-231ENST00000554994 KCNA3P22001 575 aa6.37□□□□□ -1.39
ATXN3-231ENST00000554994 MAP2K1Q02750 393 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-231ENST00000554994 DALRD3Q5D0E6 543 aaKnown RBP6.37□□□□□ -1.39
ATXN3-231ENST00000554994 NME9Q86XW9 330 aa6.37□□□□□ -1.39
ATXN3-231ENST00000554994 FAM117AQ9C073 453 aa6.37□□□□□ -1.39
ATXN3-231ENST00000554994 RGPD2P0DJD1 1756 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 TIAM2Q8IVF5 1701 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 PALLDQ8WX93 1383 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 PASKQ96RG2 1323 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 MYCP01106 439 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-231ENST00000554994 CHRNA5P30532 468 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 RSPO4Q2I0M5 234 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-231ENST00000554994 FOXD4L6Q3SYB3 417 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-231ENST00000554994 FOXD4L3Q6VB84 417 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-231ENST00000554994 NBPF11Q86T75 865 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 LTV1Q96GA3 475 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-231ENST00000554994 KRTAP4-12Q9BQ66 201 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 PLVAPQ9BX97 442 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 NDFIP2Q9NV92 336 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 PIM2Q9P1W9 311 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 UBR3Q6ZT12 1888 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 TAF1LQ8IZX4 1826 aa6.36□□□□□ -1.39
ATXN3-231ENST00000554994 PPM1GO15355 546 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-231ENST00000554994 FBLN1P23142 703 aa6.35□□□□□ -1.39
ATXN3-231ENST00000554994 TNNT2P45379 298 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-231ENST00000554994 DEFB115Q30KQ5 88 aa6.35□□□□□ -1.39
ATXN3-231ENST00000554994 TRIM11Q96F44 468 aa6.35□□□□□ -1.39
ATXN3-231ENST00000554994 COG3Q96JB2 828 aa6.35□□□□□ -1.39
ATXN3-231ENST00000554994 GGNBP2Q9H3C7 697 aa6.35□□□□□ -1.39
ATXN3-231ENST00000554994 ZFP64Q9NPA5 681 aa6.35□□□□□ -1.39
ATXN3-231ENST00000554994 CCDC87Q9NVE4 849 aa6.35□□□□□ -1.39
ATXN3-231ENST00000554994 ABT1Q9ULW3 272 aaKnown RBP6.35□□□□□ -1.39
ATXN3-231ENST00000554994 LTBP1Q14766 1721 aa6.35□□□□□ -1.39
ATXN3-231ENST00000554994 NFAT5O94916 1531 aa6.35□□□□□ -1.39
ATXN3-231ENST00000554994 TTC21AQ8NDW8 1320 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 DCDC2BA2VCK2 349 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 RASSF10A6NK89 507 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 STAU1O95793 577 aaKnown RBP6.34□□□□□ -1.39
ATXN3-231ENST00000554994 CD33P20138 364 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 LMNB1P20700 586 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 PLA2G4AP47712 749 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 AMPHP49418 695 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 KCNH5Q8NCM2 988 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 ANKRD24Q8TF21 1146 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 XAGE2Q96GT9 111 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 DDRGK1Q96HY6 314 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 PUS7Q96PZ0 661 aaKnown RBP6.34□□□□□ -1.39
ATXN3-231ENST00000554994 ZCCHC2Q9C0B9 1178 aaKnown RBP6.34□□□□□ -1.39
ATXN3-231ENST00000554994 KDM4CQ9H3R0 1056 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 PANK3Q9H999 370 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 CASP8AP2Q9UKL3 1982 aa6.34□□□□□ -1.39
ATXN3-231ENST00000554994 KDM6AO15550 1401 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms