RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
NUMB-212ENST00000554546 PRDM15P57071 1507 aaPredicted RBP12.84□□□□□ -0.35
NUMB-212ENST00000554546 MFN1Q8IWA4 741 aa12.84□□□□□ -0.35
NUMB-212ENST00000554546 HOOK2Q96ED9 719 aa12.84□□□□□ -0.35
NUMB-212ENST00000554546 TTC21AQ8NDW8 1320 aa12.84□□□□□ -0.35
NUMB-212ENST00000554546 CEP170Q5SW79 1584 aa12.84□□□□□ -0.35
NUMB-212ENST00000554546 MYO1BO43795 1136 aa12.83□□□□□ -0.35
NUMB-212ENST00000554546 GNAT1P11488 350 aa12.83□□□□□ -0.35
NUMB-212ENST00000554546 IFT88Q13099 833 aa12.83□□□□□ -0.35
NUMB-212ENST00000554546 ALDH1L2Q3SY69 923 aa12.83□□□□□ -0.35
NUMB-212ENST00000554546 DDX46Q7L014 1031 aaKnown RBP12.83□□□□□ -0.35
NUMB-212ENST00000554546 HPCAL4Q9UM19 191 aa12.83□□□□□ -0.35
NUMB-212ENST00000554546 ELL2O00472 640 aaPredicted RBP12.83□□□□□ -0.36
NUMB-212ENST00000554546 BUB1BO60566 1050 aaPredicted RBP12.83□□□□□ -0.36
NUMB-212ENST00000554546 UPP2O95045 317 aa12.83□□□□□ -0.36
NUMB-212ENST00000554546 MTHFSP49914 203 aa12.83□□□□□ -0.36
NUMB-212ENST00000554546 FUKQ8N0W3 1084 aa12.83□□□□□ -0.36
NUMB-212ENST00000554546 NECAB1Q8N987 351 aa12.83□□□□□ -0.36
NUMB-212ENST00000554546 ATL2Q8NHH9 583 aa12.83□□□□□ -0.36
NUMB-212ENST00000554546 SMNDC1O75940 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
NUMB-212ENST00000554546 PDE1AP54750 535 aa12.83□□□□□ -0.36
NUMB-212ENST00000554546 AKAP17AQ02040 695 aaKnown RBP12.83□□□□□ -0.36
NUMB-212ENST00000554546 TRIM58Q8NG06 486 aa12.83□□□□□ -0.36
NUMB-212ENST00000554546 HAUS2Q9NVX0 235 aa12.83□□□□□ -0.36
NUMB-212ENST00000554546 RAD54L2Q9Y4B4 1467 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 ATP6V1G1O75348 118 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 ME3Q16798 604 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 STAMBPL1Q96FJ0 436 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 TSC22D3Q99576 134 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 PHACTR1Q9C0D0 580 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 GOLGA6L7A0A1B0GV03 622 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 CAPN15O75808 1086 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 MED14O60244 1454 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 ATXN2Q99700 1313 aaKnown RBP12.82□□□□□ -0.36
NUMB-212ENST00000554546 GOLGA6BA6NDN3 693 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 PDCLQ13371 301 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 ACBD5Q5T8D3 534 aaPredicted RBP12.82□□□□□ -0.36
NUMB-212ENST00000554546 RASSF8Q8NHQ8 419 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 MAGEC3Q8TD91 643 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 CFAP53Q96M91 514 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 ALS2CR12Q96Q35 445 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 LZTS2Q9BRK4 669 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 VIPAS39Q9H9C1 493 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 HOOK1Q9UJC3 728 aaKnown RBP12.82□□□□□ -0.36
NUMB-212ENST00000554546 CDC23Q9UJX2 597 aa12.82□□□□□ -0.36
NUMB-212ENST00000554546 H7C1W4 665 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 OPLAHO14841 1288 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 RNF8O76064 485 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 ROR2Q01974 943 aaKnown RBP12.81□□□□□ -0.36
NUMB-212ENST00000554546 TMEM62Q0P6H9 643 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 HDGFL1Q5TGJ6 251 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 SPATS2Q86XZ4 545 aaKnown RBP12.81□□□□□ -0.36
NUMB-212ENST00000554546 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
NUMB-212ENST00000554546 DESI2Q9BSY9 194 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 ERICH2A1L162 156 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 GOLGA6L9A6NEM1 432 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 EIF4E1BA6NMX2 242 aaKnown RBP12.81□□□□□ -0.36
NUMB-212ENST00000554546 SMIM24O75264 130 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 MAP4K4O95819 1239 aaPredicted RBP12.81□□□□□ -0.36
NUMB-212ENST00000554546 LMOD1P29536 600 aaPredicted RBP12.81□□□□□ -0.36
NUMB-212ENST00000554546 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 RBM41Q96IZ5 413 aaKnown RBP12.81□□□□□ -0.36
NUMB-212ENST00000554546 TTC14Q96N46 770 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 MTRQ99707 1265 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 IQCGQ9H095 443 aaKnown RBP12.81□□□□□ -0.36
NUMB-212ENST00000554546 BAIAP2L1Q9UHR4 511 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
NUMB-212ENST00000554546 ARHGAP6O43182 974 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 TOGARAM2Q6ZUX3 1019 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 CTAGE15A4D2H0 777 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 CTAGE8P0CG41 777 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 TMPOP42166 694 aaKnown RBP12.8□□□□□ -0.36
NUMB-212ENST00000554546 PLCB4Q15147 1175 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 CTAGE6Q86UF2 777 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 CTAGE4Q8IX94 777 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 RANBP17Q9H2T7 1088 aaKnown RBP12.8□□□□□ -0.36
NUMB-212ENST00000554546 POLD4Q9HCU8 107 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 LZTFL1Q9NQ48 299 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 CFDP1Q9UEE9 299 aaPredicted RBP12.8□□□□□ -0.36
NUMB-212ENST00000554546 DNMT1P26358 1616 aaKnown RBP12.8□□□□□ -0.36
NUMB-212ENST00000554546 HSPA4P34932 840 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 SYCP3Q8IZU3 236 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 PDILTQ8N807 584 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 NOA1Q8NC60 698 aaKnown RBP12.8□□□□□ -0.36
NUMB-212ENST00000554546 CCDC47Q96A33 483 aaKnown RBP12.8□□□□□ -0.36
NUMB-212ENST00000554546 MYO1AQ9UBC5 1043 aa12.8□□□□□ -0.36
NUMB-212ENST00000554546 CORO1CQ9ULV4 474 aaPredicted RBP12.8□□□□□ -0.36
NUMB-212ENST00000554546 FERP16591 822 aa12.79□□□□□ -0.36
NUMB-212ENST00000554546 FCHSD1Q86WN1 690 aa12.79□□□□□ -0.36
NUMB-212ENST00000554546 NUP58Q9BVL2 599 aa12.79□□□□□ -0.36
NUMB-212ENST00000554546 ATP2C2O75185 946 aa12.79□□□□□ -0.36
NUMB-212ENST00000554546 LINGO3P0C6S8 592 aa12.79□□□□□ -0.36
NUMB-212ENST00000554546 RASA3Q14644 834 aa12.79□□□□□ -0.36
NUMB-212ENST00000554546 SLX1AQ9BQ83 275 aa12.79□□□□□ -0.36
NUMB-212ENST00000554546 SNX14Q9Y5W7 946 aa12.79□□□□□ -0.36
NUMB-212ENST00000554546 ALDH1B1P30837 517 aa12.79□□□□□ -0.36
NUMB-212ENST00000554546 GCLCP48506 637 aaPredicted RBP12.79□□□□□ -0.36
NUMB-212ENST00000554546 YTHDF3Q7Z739 585 aaKnown RBP12.79□□□□□ -0.36
NUMB-212ENST00000554546 MKL1Q969V6 931 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms