RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS33B-203ENST00000554264 PHF24Q9UPV7 400 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 NRAPQ86VF7 1730 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 IFT172Q9UG01 1749 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 INSRP06213 1382 aa7.83□□□□□ -1.16
VPS33B-203ENST00000554264 EIF3AQ14152 1382 aaKnown RBP7.83□□□□□ -1.16
VPS33B-203ENST00000554264 COL14A1Q05707 1796 aaKnown RBP7.82□□□□□ -1.16
VPS33B-203ENST00000554264 MICAL2O94851 1124 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 FAM182BQ5T319 152 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 IER5Q5VY09 327 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 LYPD4Q6UWN0 246 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 PMFBP1Q8TBY8 1022 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 ACDQ96AP0 544 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 PRAM1Q96QH2 718 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 BCL11AQ9H165 835 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 BRD7Q9NPI1 651 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 KLF15Q9UIH9 416 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 THSD7AQ9UPZ6 1657 aa7.82□□□□□ -1.16
VPS33B-203ENST00000554264 ZBTB39O15060 712 aa7.81□□□□□ -1.16
VPS33B-203ENST00000554264 TRIM37O94972 964 aa7.81□□□□□ -1.16
VPS33B-203ENST00000554264 APBA3O96018 575 aa7.81□□□□□ -1.16
VPS33B-203ENST00000554264 INPP5BP32019 993 aa7.81□□□□□ -1.16
VPS33B-203ENST00000554264 SAFB2Q14151 953 aaKnown RBP eCLIP7.81□□□□□ -1.16
VPS33B-203ENST00000554264 NBPF8Q3BBV2 869 aa7.81□□□□□ -1.16
VPS33B-203ENST00000554264 ZNF385CQ66K41 422 aaPredicted RBP7.81□□□□□ -1.16
VPS33B-203ENST00000554264 C1orf229Q6ZS94 237 aaPredicted RBP7.81□□□□□ -1.16
VPS33B-203ENST00000554264 SLC30A3Q99726 388 aa7.81□□□□□ -1.16
VPS33B-203ENST00000554264 PRDM11Q9NQV5 511 aa7.81□□□□□ -1.16
VPS33B-203ENST00000554264 MARK1Q9P0L2 795 aa7.81□□□□□ -1.16
VPS33B-203ENST00000554264 POGKQ9P215 609 aa7.81□□□□□ -1.16
VPS33B-203ENST00000554264 USP20Q9Y2K6 914 aa7.81□□□□□ -1.16
VPS33B-203ENST00000554264 SPATA31A1Q5TZJ5 1347 aa7.8□□□□□ -1.16
VPS33B-203ENST00000554264 DLC1Q96QB1 1528 aa7.8□□□□□ -1.16
VPS33B-203ENST00000554264 IDH3AP50213 366 aa7.8□□□□□ -1.16
VPS33B-203ENST00000554264 KCNQ4P56696 695 aa7.8□□□□□ -1.16
VPS33B-203ENST00000554264 MTMR3Q13615 1198 aa7.8□□□□□ -1.16
VPS33B-203ENST00000554264 GTF3C2Q8WUA4 911 aaPredicted RBP7.8□□□□□ -1.16
VPS33B-203ENST00000554264 MRS2Q9HD23 443 aa7.8□□□□□ -1.16
VPS33B-203ENST00000554264 DNMT3AQ9Y6K1 912 aaPredicted RBP7.8□□□□□ -1.16
VPS33B-203ENST00000554264 TNS1Q9HBL0 1735 aaKnown RBP7.8□□□□□ -1.16
VPS33B-203ENST00000554264 RNF123Q5XPI4 1314 aa7.79□□□□□ -1.16
VPS33B-203ENST00000554264 RGPD8O14715 1765 aaPredicted RBP7.79□□□□□ -1.16
VPS33B-203ENST00000554264 TRPM3Q9HCF6 1732 aaPredicted RBP7.79□□□□□ -1.16
VPS33B-203ENST00000554264 BMP4P12644 408 aa7.79□□□□□ -1.16
VPS33B-203ENST00000554264 LAMC2Q13753 1193 aa7.79□□□□□ -1.16
VPS33B-203ENST00000554264 HIF1AQ16665 826 aa7.79□□□□□ -1.16
VPS33B-203ENST00000554264 TREML1Q86YW5 311 aa7.79□□□□□ -1.16
VPS33B-203ENST00000554264 ZSCAN1Q8NBB4 408 aa7.79□□□□□ -1.16
VPS33B-203ENST00000554264 SPON1Q9HCB6 807 aa7.79□□□□□ -1.16
VPS33B-203ENST00000554264 PPP1R1BQ9UD71 204 aaPredicted RBP7.79□□□□□ -1.16
VPS33B-203ENST00000554264 KCNH4Q9UQ05 1017 aa7.79□□□□□ -1.16
VPS33B-203ENST00000554264 NINLQ9Y2I6 1382 aa7.79□□□□□ -1.16
VPS33B-203ENST00000554264 ALS2Q96Q42 1657 aa7.79□□□□□ -1.16
VPS33B-203ENST00000554264 CELA2BP08218 269 aaPredicted RBP7.78□□□□□ -1.16
VPS33B-203ENST00000554264 BRD2P25440 801 aaKnown RBP7.78□□□□□ -1.16
VPS33B-203ENST00000554264 INSM1Q01101 510 aaPredicted RBP7.78□□□□□ -1.16
VPS33B-203ENST00000554264 PDE3BQ13370 1112 aa7.78□□□□□ -1.16
VPS33B-203ENST00000554264 NGDNQ8NEJ9 315 aaKnown RBP7.78□□□□□ -1.16
VPS33B-203ENST00000554264 TULP4Q9NRJ4 1543 aa7.78□□□□□ -1.16
VPS33B-203ENST00000554264 KIF7Q2M1P5 1343 aa7.78□□□□□ -1.16
VPS33B-203ENST00000554264 KIAA0232Q92628 1395 aa7.77□□□□□ -1.17
VPS33B-203ENST00000554264 KCNQ2O43526 872 aa7.77□□□□□ -1.17
VPS33B-203ENST00000554264 MAP2K3P46734 347 aa7.77□□□□□ -1.17
VPS33B-203ENST00000554264 RAB44Q7Z6P3 723 aaPredicted RBP7.77□□□□□ -1.17
VPS33B-203ENST00000554264 HELQQ8TDG4 1101 aa7.77□□□□□ -1.17
VPS33B-203ENST00000554264 HIRIP3Q9BW71 556 aaPredicted RBP7.77□□□□□ -1.17
VPS33B-203ENST00000554264 ANO2Q9NQ90 1003 aa7.77□□□□□ -1.17
VPS33B-203ENST00000554264 STIM2Q9P246 746 aa7.77□□□□□ -1.17
VPS33B-203ENST00000554264 NUDCQ9Y266 331 aa7.77□□□□□ -1.17
VPS33B-203ENST00000554264 PRR36Q9H6K5 1346 aa7.77□□□□□ -1.17
VPS33B-203ENST00000554264 ATP7BP35670 1465 aa7.76□□□□□ -1.17
VPS33B-203ENST00000554264 BRD4O60885 1362 aaPredicted RBP7.76□□□□□ -1.17
VPS33B-203ENST00000554264 ARHGEF15O94989 841 aa7.76□□□□□ -1.17
VPS33B-203ENST00000554264 ANP32AP39687 249 aaKnown RBP7.76□□□□□ -1.17
VPS33B-203ENST00000554264 SERPINB4P48594 390 aa7.76□□□□□ -1.17
VPS33B-203ENST00000554264 PCBP4P57723 403 aaKnown RBP7.76□□□□□ -1.17
VPS33B-203ENST00000554264 EVA1CP58658 441 aa7.76□□□□□ -1.17
VPS33B-203ENST00000554264 SPEM2Q0P670 501 aa7.76□□□□□ -1.17
VPS33B-203ENST00000554264 OXCT2Q9BYC2 517 aaPredicted RBP7.76□□□□□ -1.17
VPS33B-203ENST00000554264 GSX2Q9BZM3 304 aa7.76□□□□□ -1.17
VPS33B-203ENST00000554264 GGA1Q9UJY5 639 aa7.76□□□□□ -1.17
VPS33B-203ENST00000554264 RREB1Q92766 1687 aa7.76□□□□□ -1.17
VPS33B-203ENST00000554264 RALBP1Q15311 655 aa7.75□□□□□ -1.17
VPS33B-203ENST00000554264 CHRNA2Q15822 529 aa7.75□□□□□ -1.17
VPS33B-203ENST00000554264 ECM1Q16610 540 aa7.75□□□□□ -1.17
VPS33B-203ENST00000554264 ATCAYQ86WG3 371 aa7.75□□□□□ -1.17
VPS33B-203ENST00000554264 FCHSD1Q86WN1 690 aa7.75□□□□□ -1.17
VPS33B-203ENST00000554264 TCP11L2Q8N4U5 519 aa7.75□□□□□ -1.17
VPS33B-203ENST00000554264 USP35Q9P2H5 1018 aa7.75□□□□□ -1.17
VPS33B-203ENST00000554264 NSFL1CQ9UNZ2 370 aaKnown RBP7.75□□□□□ -1.17
VPS33B-203ENST00000554264 TRAK1Q9UPV9 953 aa7.75□□□□□ -1.17
VPS33B-203ENST00000554264 THRAP3Q9Y2W1 955 aaKnown RBP7.75□□□□□ -1.17
VPS33B-203ENST00000554264 RTCBQ9Y3I0 505 aaKnown RBP7.75□□□□□ -1.17
VPS33B-203ENST00000554264 SSH2Q76I76 1423 aa7.75□□□□□ -1.17
VPS33B-203ENST00000554264 CRYBG1Q9Y4K1 1723 aa7.75□□□□□ -1.17
VPS33B-203ENST00000554264 USP47Q96K76 1375 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 NEURL1BA8MQ27 555 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 ARAFP10398 606 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 MPSTP25325 297 aa7.74□□□□□ -1.17
VPS33B-203ENST00000554264 ARID4AP29374 1257 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms