RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 GPAA1O43292 621 aa9.17□□□□□ -0.94
TDP1-209ENST00000554180 GNAT2P19087 354 aa9.17□□□□□ -0.94
TDP1-209ENST00000554180 HSPA4P34932 840 aa9.17□□□□□ -0.94
TDP1-209ENST00000554180 ANP32AP39687 249 aaKnown RBP9.17□□□□□ -0.94
TDP1-209ENST00000554180 MECOMQ03112 1051 aa9.17□□□□□ -0.94
TDP1-209ENST00000554180 AOC3Q16853 763 aa9.17□□□□□ -0.94
TDP1-209ENST00000554180 NAA16Q6N069 864 aaPredicted RBP9.17□□□□□ -0.94
TDP1-209ENST00000554180 DZIP1Q86YF9 867 aaKnown RBP9.17□□□□□ -0.94
TDP1-209ENST00000554180 SLF2Q8IX21 1173 aa9.17□□□□□ -0.94
TDP1-209ENST00000554180 SEC62Q99442 399 aaKnown RBP9.17□□□□□ -0.94
TDP1-209ENST00000554180 U3KPZ7 1027 aaPredicted RBP9.17□□□□□ -0.94
TDP1-209ENST00000554180 MYO3BQ8WXR4 1341 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 USP17L3A6NCW0 530 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 USP17L4A6NCW7 530 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 NFKBIEO00221 500 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 CHGBP05060 677 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 LDHCP07864 332 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 HSPD1P10809 573 aaKnown RBP9.16□□□□□ -0.94
TDP1-209ENST00000554180 CYP7A1P22680 504 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 IARSP41252 1262 aaKnown RBP9.16□□□□□ -0.94
TDP1-209ENST00000554180 GTF2IP78347 998 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 PTH1RQ03431 593 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 DOK7Q18PE1 504 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 RNF20Q5VTR2 975 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 TTLL5Q6EMB2 1281 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 CCDC129Q6ZRS4 1044 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 USP17L1Q7RTZ2 530 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 LARGE2Q8N3Y3 721 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 ZNF384Q8TF68 577 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 KCNB2Q92953 911 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 FAM163AQ96GL9 167 aaPredicted RBP9.16□□□□□ -0.94
TDP1-209ENST00000554180 SYT17Q9BSW7 474 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 DBNDD1Q9H9R9 158 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 RBM8AQ9Y5S9 174 aaKnown RBP9.16□□□□□ -0.94
TDP1-209ENST00000554180 ARFGEF1Q9Y6D6 1849 aa9.16□□□□□ -0.94
TDP1-209ENST00000554180 FER1L6Q2WGJ9 1857 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 GAKO14976 1311 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 MBD4O95243 580 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 ZKSCAN1P17029 563 aaPredicted RBP9.15□□□□□ -0.94
TDP1-209ENST00000554180 NECTIN1Q15223 517 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 RABEP1Q15276 862 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 TSGA10IPQ3SY00 556 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 SLFNL1Q499Z3 407 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 DACT2Q5SW24 774 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 NIM1KQ8IY84 436 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 JDP2Q8WYK2 163 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 STRBPQ96SI9 672 aaKnown RBP9.15□□□□□ -0.94
TDP1-209ENST00000554180 KIF2CQ99661 725 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 RIOK1Q9BRS2 568 aaKnown RBP9.15□□□□□ -0.94
TDP1-209ENST00000554180 MRIQ9BWK5 157 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 ZNF277Q9NRM2 450 aaPredicted RBP9.15□□□□□ -0.94
TDP1-209ENST00000554180 CTNNA3Q9UI47 895 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 ZNRF3Q9ULT6 936 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 JAG2Q9Y219 1238 aa9.15□□□□□ -0.94
TDP1-209ENST00000554180 MROH7-TTC4A0A0A0MT08 1334 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 MAGEB6P1A0A0J9YX57 407 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 FOXP2O15409 715 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 BAG3O95817 575 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 PLCG2P16885 1265 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 MMP14P50281 582 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 PPP4CP60510 307 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 HDLBPQ00341 1268 aaKnown RBP9.14□□□□□ -0.95
TDP1-209ENST00000554180 KRT32Q14532 448 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 ALX1Q15699 326 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 VPS53Q5VIR6 699 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 CREB3L3Q68CJ9 461 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 GIMAP6Q6P9H5 292 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 ADGRA1Q86SQ6 560 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 CERS5Q8N5B7 392 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 DDRGK1Q96HY6 314 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 NOL10Q9BSC4 688 aaKnown RBP9.14□□□□□ -0.95
TDP1-209ENST00000554180 NACAP1Q9BZK3 213 aa9.14□□□□□ -0.95
TDP1-209ENST00000554180 GPR75-ASB3A0A0A6YYF3 556 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 YDJCA8MPS7 323 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 PATL2C9JE40 543 aaKnown RBP9.13□□□□□ -0.95
TDP1-209ENST00000554180 SLC27A2O14975 620 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 DIXDC1Q155Q3 683 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 GRIK5Q16478 980 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 HHIPL2Q6UWX4 724 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 LCORLQ8N3X6 602 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 MIGA1Q8NAN2 632 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 FBXW7Q969H0 707 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 CRNKL1Q9BZJ0 848 aaKnown RBP9.13□□□□□ -0.95
TDP1-209ENST00000554180 TM6SF1Q9BZW5 370 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 ARMT1Q9H993 441 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 GOLGB1Q14789 3259 aaKnown RBP9.13□□□□□ -0.95
TDP1-209ENST00000554180 COL4A5P29400 1685 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 CCDC88AQ3V6T2 1871 aa9.13□□□□□ -0.95
TDP1-209ENST00000554180 MYO5AQ9Y4I1 1855 aaKnown RBP9.13□□□□□ -0.95
TDP1-209ENST00000554180 CHD4Q14839 1912 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 GSG1L2A8MUP6 293 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 FGAP02671 866 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 VIL1P09327 827 aaKnown RBP9.12□□□□□ -0.95
TDP1-209ENST00000554180 PSMA5P28066 241 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 IMMTQ16891 758 aaKnown RBP9.12□□□□□ -0.95
TDP1-209ENST00000554180 RSBN1LQ6PCB5 846 aaPredicted RBP9.12□□□□□ -0.95
TDP1-209ENST00000554180 AGBL3Q8NEM8 1001 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 TEKT1Q969V4 418 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 ATP8A2Q9NTI2 1148 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 AATFQ9NY61 560 aaKnown RBP eCLIP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms