RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 SLC51AQ86UW1 340 aa6.47□□□□□ -1.37
PCNX4-206ENST00000553513 ARMC10Q8N2F6 343 aa6.47□□□□□ -1.37
PCNX4-206ENST00000553513 MYRFLQ96LU7 910 aa6.47□□□□□ -1.37
PCNX4-206ENST00000553513 TMPRSS13Q9BYE2 586 aa6.47□□□□□ -1.37
PCNX4-206ENST00000553513 SUGCTQ9HAC7 445 aa6.47□□□□□ -1.37
PCNX4-206ENST00000553513 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 GSC2O15499 205 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 GAS2O43903 313 aaKnown RBP6.46□□□□□ -1.38
PCNX4-206ENST00000553513 FSTP19883 344 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 MAPK8P45983 427 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 PREPP48147 710 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 EXOSC6Q5RKV6 272 aaKnown RBP6.46□□□□□ -1.38
PCNX4-206ENST00000553513 DTHD1Q6ZMT9 781 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 SMG8Q8ND04 991 aaKnown RBP6.46□□□□□ -1.38
PCNX4-206ENST00000553513 GLIS3Q8NEA6 775 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 FBF1Q8TES7 1133 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 BCO2Q9BYV7 579 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 NRSN2Q9GZP1 204 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 STOML1Q9UBI4 398 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 HIF3AQ9Y2N7 669 aa6.46□□□□□ -1.38
PCNX4-206ENST00000553513 XRCC5P13010 732 aaKnown RBP6.45□□□□□ -1.38
PCNX4-206ENST00000553513 MAOBP27338 520 aa6.45□□□□□ -1.38
PCNX4-206ENST00000553513 ATP2B2Q01814 1243 aa6.45□□□□□ -1.38
PCNX4-206ENST00000553513 AP3B2Q13367 1082 aa6.45□□□□□ -1.38
PCNX4-206ENST00000553513 POU4F3Q15319 338 aa6.45□□□□□ -1.38
PCNX4-206ENST00000553513 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.45□□□□□ -1.38
PCNX4-206ENST00000553513 ALG1LQ6GMV1 187 aa6.45□□□□□ -1.38
PCNX4-206ENST00000553513 PI16Q6UXB8 463 aa6.45□□□□□ -1.38
PCNX4-206ENST00000553513 C12orf50Q8NA57 414 aaPredicted RBP6.45□□□□□ -1.38
PCNX4-206ENST00000553513 CORO1BQ9BR76 489 aa6.45□□□□□ -1.38
PCNX4-206ENST00000553513 DLGAP3O95886 979 aa6.44□□□□□ -1.38
PCNX4-206ENST00000553513 BMP3P12645 472 aa6.44□□□□□ -1.38
PCNX4-206ENST00000553513 FCGRTP55899 365 aa6.44□□□□□ -1.38
PCNX4-206ENST00000553513 CCDC27Q2M243 656 aa6.44□□□□□ -1.38
PCNX4-206ENST00000553513 SND1Q7KZF4 910 aaKnown RBP eCLIP6.44□□□□□ -1.38
PCNX4-206ENST00000553513 FAM20CQ8IXL6 584 aa6.44□□□□□ -1.38
PCNX4-206ENST00000553513 TRIM56Q9BRZ2 755 aaKnown RBP6.44□□□□□ -1.38
PCNX4-206ENST00000553513 TIAF1O95411 115 aa6.43□□□□□ -1.38
PCNX4-206ENST00000553513 CLEC10AQ8IUN9 316 aa6.43□□□□□ -1.38
PCNX4-206ENST00000553513 SRCIN1Q9C0H9 1055 aa6.43□□□□□ -1.38
PCNX4-206ENST00000553513 KCNF1Q9H3M0 494 aa6.43□□□□□ -1.38
PCNX4-206ENST00000553513 SCO2A0A1W2PP80 73 aa6.42□□□□□ -1.38
PCNX4-206ENST00000553513 IGLV1-40P01703 118 aa6.42□□□□□ -1.38
PCNX4-206ENST00000553513 HNRNPUQ00839 825 aaKnown RBP eCLIP6.42□□□□□ -1.38
PCNX4-206ENST00000553513 PPP2R3AQ06190 1150 aa6.42□□□□□ -1.38
PCNX4-206ENST00000553513 NXPE4Q6UWF7 544 aa6.42□□□□□ -1.38
PCNX4-206ENST00000553513 BEND4Q6ZU67 534 aa6.42□□□□□ -1.38
PCNX4-206ENST00000553513 Q8N3U1 123 aa6.42□□□□□ -1.38
PCNX4-206ENST00000553513 FAM83CQ9BQN1 747 aa6.42□□□□□ -1.38
PCNX4-206ENST00000553513 C7orf69Q9H7B7 122 aa6.42□□□□□ -1.38
PCNX4-206ENST00000553513 GPN3Q9UHW5 284 aaPredicted RBP6.42□□□□□ -1.38
PCNX4-206ENST00000553513 GIPC1O14908 333 aa6.41□□□□□ -1.38
PCNX4-206ENST00000553513 P4HBP07237 508 aaKnown RBP6.41□□□□□ -1.38
PCNX4-206ENST00000553513 GSTT1P30711 240 aa6.41□□□□□ -1.38
PCNX4-206ENST00000553513 RBM25P49756 843 aaKnown RBP6.41□□□□□ -1.38
PCNX4-206ENST00000553513 SOX4Q06945 474 aaPredicted RBP6.41□□□□□ -1.38
PCNX4-206ENST00000553513 FAAP100Q0VG06 881 aa6.41□□□□□ -1.38
PCNX4-206ENST00000553513 TRIM42Q8IWZ5 723 aa6.41□□□□□ -1.38
PCNX4-206ENST00000553513 RAD18Q9NS91 495 aa6.41□□□□□ -1.38
PCNX4-206ENST00000553513 TMEM39AQ9NV64 488 aa6.41□□□□□ -1.38
PCNX4-206ENST00000553513 RNF112Q9ULX5 631 aa6.41□□□□□ -1.38
PCNX4-206ENST00000553513 SPG7Q9UQ90 795 aa6.41□□□□□ -1.38
PCNX4-206ENST00000553513 AKAP2Q9Y2D5 859 aa6.41□□□□□ -1.38
PCNX4-206ENST00000553513 HMX2A2RU54 273 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 CTSBP07858 339 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 ADH5P11766 374 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 DRD2P14416 443 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 MAP4P27816 1152 aaKnown RBP6.4□□□□□ -1.38
PCNX4-206ENST00000553513 RXRBP28702 533 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 USP11P51784 963 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 ZNF157P51786 506 aaPredicted RBP6.4□□□□□ -1.38
PCNX4-206ENST00000553513 NFIAQ12857 509 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 PDE3AQ14432 1141 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 SGO2Q562F6 1265 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 RNF43Q68DV7 783 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 C2CD4AQ8NCU7 369 aaPredicted RBP6.4□□□□□ -1.38
PCNX4-206ENST00000553513 RGS22Q8NE09 1264 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 DBNDD2Q9BQY9 259 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 YIPF2Q9BWQ6 316 aa6.4□□□□□ -1.38
PCNX4-206ENST00000553513 ECEL1O95672 775 aa6.39□□□□□ -1.39
PCNX4-206ENST00000553513 LDHBP07195 334 aaKnown RBP6.39□□□□□ -1.39
PCNX4-206ENST00000553513 FGD1P98174 961 aa6.39□□□□□ -1.39
PCNX4-206ENST00000553513 COL19A1Q14993 1142 aa6.39□□□□□ -1.39
PCNX4-206ENST00000553513 AKAP4Q5JQC9 854 aa6.39□□□□□ -1.39
PCNX4-206ENST00000553513 SETDB2Q96T68 719 aa6.39□□□□□ -1.39
PCNX4-206ENST00000553513 WWC3Q9ULE0 1092 aa6.39□□□□□ -1.39
PCNX4-206ENST00000553513 AOC2O75106 756 aa6.38□□□□□ -1.39
PCNX4-206ENST00000553513 LRP8Q14114 963 aa6.38□□□□□ -1.39
PCNX4-206ENST00000553513 ARTNQ5T4W7 220 aa6.38□□□□□ -1.39
PCNX4-206ENST00000553513 C3orf58Q8NDZ4 430 aa6.38□□□□□ -1.39
PCNX4-206ENST00000553513 FRMD6Q96NE9 622 aa6.38□□□□□ -1.39
PCNX4-206ENST00000553513 OSBPL7Q9BZF2 842 aa6.38□□□□□ -1.39
PCNX4-206ENST00000553513 PPM1HQ9ULR3 514 aa6.38□□□□□ -1.39
PCNX4-206ENST00000553513 AP4E1Q9UPM8 1137 aa6.38□□□□□ -1.39
PCNX4-206ENST00000553513 SYNGAP1Q96PV0 1343 aa6.38□□□□□ -1.39
PCNX4-206ENST00000553513 FAM95CA0A1B0GW59 222 aa6.37□□□□□ -1.39
PCNX4-206ENST00000553513 ANKRD33BA6NCL7 494 aa6.37□□□□□ -1.39
PCNX4-206ENST00000553513 GSTP1P09211 210 aaKnown RBP6.37□□□□□ -1.39
PCNX4-206ENST00000553513 PAOXQ6QHF9 649 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms