RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 TSR1Q2NL82 804 aaKnown RBP11.26□□□□□ -0.61
PRIM1-208ENST00000552590 LDLRAD1Q5T700 205 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 ARMC9Q7Z3E5 817 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 IL17REQ8NFR9 667 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 NLRP3Q96P20 1036 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 FZD1Q9UP38 647 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 NUP98P52948 1817 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 VIL1P09327 827 aaKnown RBP11.25□□□□□ -0.61
PRIM1-208ENST00000552590 NF2P35240 595 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 DDX12PQ92771 950 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 FAM161BQ96MY7 647 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 IRS2Q9Y4H2 1338 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 ZNF646O15015 1829 aaPredicted RBP11.25□□□□□ -0.61
PRIM1-208ENST00000552590 TNFRSF10AO00220 468 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 FARP2O94887 1054 aaPredicted RBP11.25□□□□□ -0.61
PRIM1-208ENST00000552590 NTSR2O95665 410 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 GJA8P48165 433 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 MAP3K12Q12852 859 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 NGEFQ8N5V2 710 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 NECTIN2Q92692 538 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 SYMPKQ92797 1274 aaKnown RBP11.25□□□□□ -0.61
PRIM1-208ENST00000552590 TATDN2Q93075 761 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 SLC10A4Q96EP9 437 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 MYOZ2Q9NPC6 264 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
PRIM1-208ENST00000552590 ANGEL1Q9UNK9 670 aaKnown RBP11.25□□□□□ -0.61
PRIM1-208ENST00000552590 SIPA1L3O60292 1781 aaPredicted RBP11.24□□□□□ -0.61
PRIM1-208ENST00000552590 ZSWIM8A7E2V4 1837 aa11.24□□□□□ -0.61
PRIM1-208ENST00000552590 MAP3K7O43318 606 aa11.24□□□□□ -0.61
PRIM1-208ENST00000552590 GDF9O60383 454 aa11.24□□□□□ -0.61
PRIM1-208ENST00000552590 PRSS12P56730 875 aa11.24□□□□□ -0.61
PRIM1-208ENST00000552590 OTUD7BQ6GQQ9 843 aa11.24□□□□□ -0.61
PRIM1-208ENST00000552590 WNK4Q96J92 1243 aa11.24□□□□□ -0.61
PRIM1-208ENST00000552590 CLMNQ96JQ2 1002 aa11.24□□□□□ -0.61
PRIM1-208ENST00000552590 PTPN18Q99952 460 aa11.24□□□□□ -0.61
PRIM1-208ENST00000552590 MUC6Q6W4X9 2439 aa11.23□□□□□ -0.61
PRIM1-208ENST00000552590 IBTKQ9P2D0 1353 aaPredicted RBP11.23□□□□□ -0.61
PRIM1-208ENST00000552590 C3orf80F5H4A9 247 aa11.23□□□□□ -0.61
PRIM1-208ENST00000552590 GJB1P08034 283 aa11.23□□□□□ -0.61
PRIM1-208ENST00000552590 ZBTB48P10074 688 aaPredicted RBP11.23□□□□□ -0.61
PRIM1-208ENST00000552590 NBPF9Q3BBW0 867 aa11.23□□□□□ -0.61
PRIM1-208ENST00000552590 ZNF697Q5TEC3 545 aa11.23□□□□□ -0.61
PRIM1-208ENST00000552590 ARHGAP39Q9C0H5 1083 aa11.23□□□□□ -0.61
PRIM1-208ENST00000552590 PNMA3Q9UL41 463 aa11.23□□□□□ -0.61
PRIM1-208ENST00000552590 ALPK3Q96L96 1907 aa11.22□□□□□ -0.61
PRIM1-208ENST00000552590 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
PRIM1-208ENST00000552590 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
PRIM1-208ENST00000552590 TDHQ8IZJ6 230 aa11.22□□□□□ -0.61
PRIM1-208ENST00000552590 POLLQ9UGP5 575 aa11.22□□□□□ -0.61
PRIM1-208ENST00000552590 ZMYND8Q9ULU4 1186 aaPredicted RBP11.22□□□□□ -0.61
PRIM1-208ENST00000552590 NSFL1CQ9UNZ2 370 aaKnown RBP11.22□□□□□ -0.61
PRIM1-208ENST00000552590 SNRPA1P09661 255 aaKnown RBP11.21□□□□□ -0.61
PRIM1-208ENST00000552590 CCL5P13501 91 aa11.21□□□□□ -0.61
PRIM1-208ENST00000552590 NFX1Q12986 1120 aaKnown RBP11.21□□□□□ -0.61
PRIM1-208ENST00000552590 CDCA8Q53HL2 280 aa11.21□□□□□ -0.61
PRIM1-208ENST00000552590 RSBN1LQ6PCB5 846 aaPredicted RBP11.21□□□□□ -0.61
PRIM1-208ENST00000552590 MAFAQ8NHW3 353 aaPredicted RBP11.21□□□□□ -0.61
PRIM1-208ENST00000552590 ERVV-1B6SEH8 477 aa11.2□□□□□ -0.62
PRIM1-208ENST00000552590 DPYSL4O14531 572 aa11.2□□□□□ -0.62
PRIM1-208ENST00000552590 USP17L8P0C7I0 530 aa11.2□□□□□ -0.62
PRIM1-208ENST00000552590 GJA5P36382 358 aa11.2□□□□□ -0.62
PRIM1-208ENST00000552590 GRAPQ13588 217 aa11.2□□□□□ -0.62
PRIM1-208ENST00000552590 TTLL7Q6ZT98 887 aa11.2□□□□□ -0.62
PRIM1-208ENST00000552590 AGBL3Q8NEM8 1001 aa11.2□□□□□ -0.62
PRIM1-208ENST00000552590 GRAPLQ8TC17 118 aaPredicted RBP11.2□□□□□ -0.62
PRIM1-208ENST00000552590 RNF208Q9H0X6 261 aa11.2□□□□□ -0.62
PRIM1-208ENST00000552590 LAMB1P07942 1786 aa11.2□□□□□ -0.62
PRIM1-208ENST00000552590 MAP3K15Q6ZN16 1313 aa11.2□□□□□ -0.62
PRIM1-208ENST00000552590 SLC10A5Q5PT55 438 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 DDX46Q7L014 1031 aaKnown RBP11.19□□□□□ -0.62
PRIM1-208ENST00000552590 ZNF34Q8IZ26 560 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 U2AF1L4Q8WU68 220 aaKnown RBP11.19□□□□□ -0.62
PRIM1-208ENST00000552590 ZBTB3Q9H5J0 574 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 DDX60Q8IY21 1712 aaKnown RBP11.19□□□□□ -0.62
PRIM1-208ENST00000552590 LAMB2P55268 1798 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 SYNGAP1Q96PV0 1343 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 GNAT3A8MTJ3 354 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 MAGEA10P43363 369 aaPredicted RBP11.19□□□□□ -0.62
PRIM1-208ENST00000552590 NBR1Q14596 966 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 FAM109BQ6ICB4 259 aaPredicted RBP11.19□□□□□ -0.62
PRIM1-208ENST00000552590 PPP1R42Q7Z4L9 355 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 C7orf61Q8IZ16 206 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 ANKLE1Q8NAG6 615 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 GMLQ99445 158 aa11.19□□□□□ -0.62
PRIM1-208ENST00000552590 TESPA1A2RU30 521 aaPredicted RBP11.18□□□□□ -0.62
PRIM1-208ENST00000552590 HCLS1P14317 486 aaPredicted RBP11.18□□□□□ -0.62
PRIM1-208ENST00000552590 SYN1P17600 705 aa11.18□□□□□ -0.62
PRIM1-208ENST00000552590 GPSM2P81274 684 aa11.18□□□□□ -0.62
PRIM1-208ENST00000552590 TAF1CQ15572 869 aaPredicted RBP11.18□□□□□ -0.62
PRIM1-208ENST00000552590 LIAT1Q6ZQX7 453 aa11.18□□□□□ -0.62
PRIM1-208ENST00000552590 ZFYVE28Q9HCC9 887 aa11.18□□□□□ -0.62
PRIM1-208ENST00000552590 LRRC37AA6NMS7 1700 aa11.17□□□□□ -0.62
PRIM1-208ENST00000552590 KIF6Q6ZMV9 814 aa11.17□□□□□ -0.62
PRIM1-208ENST00000552590 EYA3Q99504 573 aa11.17□□□□□ -0.62
PRIM1-208ENST00000552590 CDX2Q99626 313 aaPredicted RBP11.17□□□□□ -0.62
PRIM1-208ENST00000552590 UBE2OQ9C0C9 1292 aaKnown RBP11.17□□□□□ -0.62
PRIM1-208ENST00000552590 ANKRD36CQ5JPF3 1778 aa11.16□□□□□ -0.62
PRIM1-208ENST00000552590 WNT10BO00744 389 aa11.16□□□□□ -0.62
PRIM1-208ENST00000552590 GRK4P32298 578 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms