RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 LAMA4Q16363 1823 aa23.1■■□□□ 1.29
KRT18-207ENST00000550600 WDR33Q9C0J8 1336 aaKnown RBP23.09■■□□□ 1.29
KRT18-207ENST00000550600 SALL1Q9NSC2 1324 aa23.09■■□□□ 1.29
KRT18-207ENST00000550600 WTIPA6NIX2 430 aaPredicted RBP23.09■■□□□ 1.29
KRT18-207ENST00000550600 MMP10P09238 476 aa23.09■■□□□ 1.29
KRT18-207ENST00000550600 RALYLQ86SE5 291 aaKnown RBP23.09■■□□□ 1.29
KRT18-207ENST00000550600 BRD1O95696 1058 aa23.09■■□□□ 1.29
KRT18-207ENST00000550600 MCM5P33992 734 aa23.09■■□□□ 1.29
KRT18-207ENST00000550600 NAA16Q6N069 864 aaPredicted RBP23.09■■□□□ 1.29
KRT18-207ENST00000550600 CCDC83Q8IWF9 413 aa23.09■■□□□ 1.29
KRT18-207ENST00000550600 IFNL3Q8IZI9 196 aa23.09■■□□□ 1.29
KRT18-207ENST00000550600 NAPBQ9H115 298 aa23.09■■□□□ 1.29
KRT18-207ENST00000550600 NSFL1CQ9UNZ2 370 aaKnown RBP23.09■■□□□ 1.29
KRT18-207ENST00000550600 QSER1Q2KHR3 1735 aa23.08■■□□□ 1.29
KRT18-207ENST00000550600 MAGEB6P1A0A0J9YX57 407 aa23.08■■□□□ 1.29
KRT18-207ENST00000550600 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
KRT18-207ENST00000550600 COL1A1P02452 1464 aaPredicted RBP23.08■■□□□ 1.28
KRT18-207ENST00000550600 KLRK1P26718 216 aa23.07■■□□□ 1.28
KRT18-207ENST00000550600 BAG6P46379 1132 aa23.07■■□□□ 1.28
KRT18-207ENST00000550600 GPSM2P81274 684 aa23.07■■□□□ 1.28
KRT18-207ENST00000550600 TDRD7Q8NHU6 1098 aaKnown RBP23.07■■□□□ 1.28
KRT18-207ENST00000550600 ARMT1Q9H993 441 aa23.07■■□□□ 1.28
KRT18-207ENST00000550600 LARGE1O95461 756 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 SRGNP10124 158 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 PDCP20941 246 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 EZH2Q15910 746 aaKnown RBP23.06■■□□□ 1.28
KRT18-207ENST00000550600 SKOR2Q2VWA4 1001 aaPredicted RBP23.06■■□□□ 1.28
KRT18-207ENST00000550600 LARP6Q9BRS8 491 aaKnown RBP23.06■■□□□ 1.28
KRT18-207ENST00000550600 SLC4A4Q9Y6R1 1079 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 ANKRD31Q8N7Z5 1873 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 PPEF1O14829 653 aaPredicted RBP23.06■■□□□ 1.28
KRT18-207ENST00000550600 UFL1O94874 794 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 BAG4O95429 457 aaKnown RBP23.06■■□□□ 1.28
KRT18-207ENST00000550600 EN1Q05925 392 aaPredicted RBP23.06■■□□□ 1.28
KRT18-207ENST00000550600 GIMAP6Q6P9H5 292 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 ZNF274Q96GC6 653 aaPredicted RBP23.06■■□□□ 1.28
KRT18-207ENST00000550600 MASTLQ96GX5 879 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 TCEANC2Q96MN5 208 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 CNNM2Q9H8M5 875 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 ATP6V0A2Q9Y487 856 aa23.06■■□□□ 1.28
KRT18-207ENST00000550600 CCDC88AQ3V6T2 1871 aa23.05■■□□□ 1.28
KRT18-207ENST00000550600 GSG1L2A8MUP6 293 aa23.05■■□□□ 1.28
KRT18-207ENST00000550600 HAND2P61296 217 aa23.05■■□□□ 1.28
KRT18-207ENST00000550600 BRF1Q92994 677 aa23.05■■□□□ 1.28
KRT18-207ENST00000550600 NSUN4Q96CB9 384 aaKnown RBP23.05■■□□□ 1.28
KRT18-207ENST00000550600 DUOX1Q9NRD9 1551 aa23.05■■□□□ 1.28
KRT18-207ENST00000550600 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
KRT18-207ENST00000550600 TXNRD3Q86VQ6 643 aa23.04■■□□□ 1.28
KRT18-207ENST00000550600 MB21D2Q8IYB1 491 aaPredicted RBP23.04■■□□□ 1.28
KRT18-207ENST00000550600 LCORLQ8N3X6 602 aa23.04■■□□□ 1.28
KRT18-207ENST00000550600 LLPHQ9BRT6 129 aaKnown RBP23.04■■□□□ 1.28
KRT18-207ENST00000550600 ZDHHC9Q9Y397 364 aa23.04■■□□□ 1.28
KRT18-207ENST00000550600 CACNA1SQ13698 1873 aa23.04■■□□□ 1.28
KRT18-207ENST00000550600 PFKFB2O60825 505 aa23.03■■□□□ 1.28
KRT18-207ENST00000550600 GJB2P29033 226 aa23.03■■□□□ 1.28
KRT18-207ENST00000550600 EVCP57679 992 aa23.03■■□□□ 1.28
KRT18-207ENST00000550600 GSTO1P78417 241 aa23.03■■□□□ 1.28
KRT18-207ENST00000550600 CHAF1AQ13111 956 aaPredicted RBP23.03■■□□□ 1.28
KRT18-207ENST00000550600 GTF3C6Q969F1 213 aa23.03■■□□□ 1.28
KRT18-207ENST00000550600 IL1R1P14778 569 aa23.03■■□□□ 1.28
KRT18-207ENST00000550600 TDO2P48775 406 aa23.03■■□□□ 1.28
KRT18-207ENST00000550600 CERS3Q8IU89 383 aa23.03■■□□□ 1.28
KRT18-207ENST00000550600 RIOK1Q9BRS2 568 aaKnown RBP23.03■■□□□ 1.28
KRT18-207ENST00000550600 RNF41Q9H4P4 317 aaPredicted RBP23.03■■□□□ 1.28
KRT18-207ENST00000550600 ATP6V1DQ9Y5K8 247 aa23.03■■□□□ 1.28
KRT18-207ENST00000550600 MAST2Q6P0Q8 1798 aa23.02■■□□□ 1.28
KRT18-207ENST00000550600 STX6O43752 255 aa23.02■■□□□ 1.28
KRT18-207ENST00000550600 MECOMQ03112 1051 aa23.02■■□□□ 1.28
KRT18-207ENST00000550600 PKP1Q13835 747 aa23.02■■□□□ 1.28
KRT18-207ENST00000550600 NECAB1Q8N987 351 aa23.02■■□□□ 1.28
KRT18-207ENST00000550600 TBC1D16Q8TBP0 767 aa23.02■■□□□ 1.28
KRT18-207ENST00000550600 KRT23Q9C075 422 aa23.02■■□□□ 1.28
KRT18-207ENST00000550600 A0A0G2JLW4 131 aa23.01■■□□□ 1.27
KRT18-207ENST00000550600 PRC1O43663 620 aa23.01■■□□□ 1.27
KRT18-207ENST00000550600 LDHCP07864 332 aa23.01■■□□□ 1.27
KRT18-207ENST00000550600 COL9A3Q14050 684 aaPredicted RBP23.01■■□□□ 1.27
KRT18-207ENST00000550600 MIGA1Q8NAN2 632 aa23.01■■□□□ 1.27
KRT18-207ENST00000550600 MTA3Q9BTC8 594 aa23.01■■□□□ 1.27
KRT18-207ENST00000550600 EPB41L4AQ9HCS5 686 aaPredicted RBP23.01■■□□□ 1.27
KRT18-207ENST00000550600 CD209Q9NNX6 404 aa23.01■■□□□ 1.27
KRT18-207ENST00000550600 KIF3AQ9Y496 699 aa23.01■■□□□ 1.27
KRT18-207ENST00000550600 LDHBP07195 334 aaKnown RBP23■■□□□ 1.27
KRT18-207ENST00000550600 SYT1P21579 422 aa23■■□□□ 1.27
KRT18-207ENST00000550600 DZIP1Q86YF9 867 aaKnown RBP23■■□□□ 1.27
KRT18-207ENST00000550600 TBC1D22AQ8WUA7 517 aa23■■□□□ 1.27
KRT18-207ENST00000550600 C6orf229H3BNL8 230 aa23■■□□□ 1.27
KRT18-207ENST00000550600 AKNAD1Q5T1N1 836 aa23■■□□□ 1.27
KRT18-207ENST00000550600 STYK1Q6J9G0 422 aa23■■□□□ 1.27
KRT18-207ENST00000550600 TMEM87BQ96K49 555 aa23■■□□□ 1.27
KRT18-207ENST00000550600 CRNKL1Q9BZJ0 848 aaKnown RBP23■■□□□ 1.27
KRT18-207ENST00000550600 ANAPC4Q9UJX5 808 aa23■■□□□ 1.27
KRT18-207ENST00000550600 KIAA1551Q9HCM1 1747 aa22.99■■□□□ 1.27
KRT18-207ENST00000550600 H0YIN7 160 aa22.99■■□□□ 1.27
KRT18-207ENST00000550600 ZSCAN22P10073 491 aaPredicted RBP22.99■■□□□ 1.27
KRT18-207ENST00000550600 PCP11498 1178 aaKnown RBP22.99■■□□□ 1.27
KRT18-207ENST00000550600 ST3GAL1Q11201 340 aa22.99■■□□□ 1.27
KRT18-207ENST00000550600 MFSD6Q6ZSS7 791 aa22.99■■□□□ 1.27
KRT18-207ENST00000550600 ANO8Q9HCE9 1232 aaPredicted RBP22.99■■□□□ 1.27
KRT18-207ENST00000550600 POLLQ9UGP5 575 aa22.99■■□□□ 1.27
KRT18-207ENST00000550600 DHX16O60231 1041 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms