RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 ZNF148Q9UQR1 794 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 SSH2Q76I76 1423 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 PCYT1AP49585 367 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 TDRD12Q587J7 1177 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 SND1Q7KZF4 910 aaKnown RBP eCLIP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 ENAHQ8N8S7 591 aaPredicted RBP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 UBLCP1Q8WVY7 318 aaPredicted RBP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 ARHGEF2Q92974 986 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 HOOK2Q96ED9 719 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 FGD4Q96M96 766 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 ESYT1Q9BSJ8 1104 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 ZC4H2Q9NQZ6 224 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 ERBB4Q15303 1308 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 CARMIL2Q6F5E8 1435 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 MTIF2P46199 727 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 DNM1Q05193 864 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 C17orf53Q8N3J3 647 aaPredicted RBP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 EVI5LQ96CN4 794 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 PPP1R13BQ96KQ4 1090 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 C1orf115Q9H7X2 142 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 FRMD3A2A2Y4 597 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 MAP3K7O43318 606 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 EPHB4P54760 987 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 FANCCQ00597 558 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 PDE1CQ14123 709 aaPredicted RBP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 PRPF40BQ6NWY9 871 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 VPS52Q8N1B4 723 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 LZTFL1Q9NQ48 299 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 IDEP14735 1019 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 THUMPD2Q9BTF0 503 aaKnown RBP9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 VIPAS39Q9H9C1 493 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 TUBA8Q9NY65 449 aaPredicted RBP9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 UTP11Q9Y3A2 253 aaKnown RBP9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 NSD2O96028 1365 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 APOBRQ0VD83 1088 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 CFAP221Q4G0U5 840 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 CCDC122Q5T0U0 273 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 PYCARDQ9ULZ3 195 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 ARHGAP10A1A4S6 786 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 CWC27Q6UX04 472 aaKnown RBP9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 MFN1Q8IWA4 741 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 PARD3Q8TEW0 1356 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 ABTB1Q969K4 478 aaPredicted RBP9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 BICC1Q9H694 974 aaKnown RBP9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 CHGBP05060 677 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 HPDP32754 393 aaPredicted RBP9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 LMNB2Q03252 620 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 CCDC42Q96M95 316 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 UBAC1Q9BSL1 405 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 DRC3Q9H069 523 aa9.83□□□□□ -0.84
PPFIA2-220ENST00000550584 BICDL2A1A5D9 508 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 STX10O60499 249 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 KRT18P05783 430 aaKnown RBP9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 MRPS35P82673 323 aaKnown RBP9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 INAQ16352 499 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 IFT81Q8WYA0 676 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 GUCA1BQ9UMX6 200 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 MAPKBP1O60336 1514 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 FCHSD2O94868 740 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 CLTAP09496 248 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 MRPS25P82663 173 aaKnown RBP9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 SWT1Q5T5J6 900 aaKnown RBP9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 SAR1BQ9Y6B6 198 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 AOX1Q06278 1338 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 C3orf20Q8ND61 904 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 PPP1R14CQ8TAE6 165 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 YIPF3Q9GZM5 350 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 PPP2R2CQ9Y2T4 447 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 HOXA7P31268 230 aaPredicted RBP9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 IFT88Q13099 833 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 KLHL23Q8NBE8 558 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 ZNF483Q8TF39 744 aaPredicted RBP9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 DDX23Q9BUQ8 820 aaKnown RBP9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 NUF2Q9BZD4 464 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 RNF14Q9UBS8 474 aa9.82□□□□□ -0.84
PPFIA2-220ENST00000550584 KCNJ6P48051 423 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 BLVRAP53004 296 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 VWA3BQ502W6 1294 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 CC2D1AQ6P1N0 951 aaPredicted RBP9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 MLKLQ8NB16 471 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 SIL1Q9H173 461 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 ESRRGP62508 458 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 CHMP7Q8WUX9 453 aaPredicted RBP9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 LLPHQ9BRT6 129 aaKnown RBP9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 NACAP1Q9BZK3 213 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 RAB17Q9H0T7 212 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 SGSM2O43147 1006 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 MTHFSP49914 203 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 HVCN1Q96D96 273 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 CALCOCO2Q13137 446 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 E2F5Q15329 346 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 PODNQ7Z5L7 613 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 LEO1Q8WVC0 666 aaPredicted RBP9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 IQSEC3Q9UPP2 1182 aaPredicted RBP9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 HNRNPCP07910 306 aaKnown RBP eCLIP9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 TRIM27P14373 513 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 CFAP157Q5JU67 520 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 CAPZA3Q96KX2 299 aa9.81□□□□□ -0.84
PPFIA2-220ENST00000550584 LAMB3Q13751 1172 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms