RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 NBPF4Q96M43 638 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 UBXN6Q9BZV1 441 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 RAI14Q9P0K7 980 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 PIK3C2BO00750 1634 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 ALKQ9UM73 1620 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 CARMIL3Q8ND23 1372 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 RXRAP19793 462 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 KCNJ6P48051 423 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 HDGFP51858 240 aaKnown RBP13.87□□□□□ -0.19
VDR-208ENST00000550325 TFCP2Q12800 502 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 MYSM1Q5VVJ2 828 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 ANO1Q5XXA6 986 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 PPFIBP1Q86W92 1011 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 ACBD3Q9H3P7 528 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 PLEKHG2Q9H7P9 1386 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 GUCY2CP25092 1073 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 CASP8Q14790 479 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 DBNDD2Q9BQY9 259 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 NFE2L3Q9Y4A8 694 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 KLF18A0A0U1RQI7 1052 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 A0A1W2PQ27 194 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 A0A1W2PQ64 194 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 A0A1W2PQD8 194 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 EIF4A1P60842 406 aaKnown RBP13.86□□□□□ -0.19
VDR-208ENST00000550325 VSNL1P62760 191 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 SMARCC1Q92922 1105 aaPredicted RBP13.86□□□□□ -0.19
VDR-208ENST00000550325 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
VDR-208ENST00000550325 CUTAO60888 179 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 HMGB1P09429 215 aaKnown RBP13.86□□□□□ -0.19
VDR-208ENST00000550325 STX17P56962 302 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 BEND6Q5SZJ8 279 aaPredicted RBP13.86□□□□□ -0.19
VDR-208ENST00000550325 ATL3Q6DD88 541 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 LRRC31Q6UY01 552 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 PSD3Q9NYI0 1048 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 DBF4Q9UBU7 674 aaPredicted RBP13.86□□□□□ -0.19
VDR-208ENST00000550325 METP08581 1390 aa13.86□□□□□ -0.19
VDR-208ENST00000550325 CTAGE15A4D2H0 777 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 CTAGE8P0CG41 777 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 DNAJC21Q5F1R6 531 aaKnown RBP13.85□□□□□ -0.19
VDR-208ENST00000550325 SPECC1LQ69YQ0 1117 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 CTAGE6Q86UF2 777 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 TEX2Q8IWB9 1127 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 CTAGE4Q8IX94 777 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 CEP112Q8N8E3 955 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 AIFM3Q96NN9 605 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 CDC5LQ99459 802 aaKnown RBP13.85□□□□□ -0.19
VDR-208ENST00000550325 BPIFA3Q9BQP9 254 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 GEMIN8Q9NWZ8 242 aaKnown RBP13.85□□□□□ -0.19
VDR-208ENST00000550325 MED23Q9ULK4 1368 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 IKBKBO14920 756 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 FOXN1O15353 648 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 ZMYND10O75800 440 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
VDR-208ENST00000550325 HSP90AB3PQ58FF7 597 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 RIN2Q8WYP3 895 aaPredicted RBP13.85□□□□□ -0.19
VDR-208ENST00000550325 NCAPGQ9BPX3 1015 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 ALDH8A1Q9H2A2 487 aaPredicted RBP13.85□□□□□ -0.19
VDR-208ENST00000550325 HOOK1Q9UJC3 728 aaKnown RBP13.85□□□□□ -0.19
VDR-208ENST00000550325 DBNLQ9UJU6 430 aaKnown RBP13.85□□□□□ -0.19
VDR-208ENST00000550325 PCDHA5Q9Y5H7 936 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 E7EWF7 191 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 WASHC4Q2M389 1173 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 ANKZF1Q9H8Y5 726 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 MROH7-TTC4A0A0A0MT08 1334 aa13.85□□□□□ -0.19
VDR-208ENST00000550325 CTAGE9A4FU28 777 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 TTC19Q6DKK2 380 aaPredicted RBP13.84□□□□□ -0.19
VDR-208ENST00000550325 EP400NLQ6ZTU2 488 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 AFAP1L1Q8TED9 768 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 FLT4P35916 1363 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 KIF28PB7ZC32 967 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 H0YHG0 523 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 RNF40O75150 1001 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 KSR2Q6VAB6 950 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 KIFC2Q96AC6 838 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 SIRT1Q96EB6 747 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 MKRN1Q9UHC7 482 aaKnown RBP13.84□□□□□ -0.19
VDR-208ENST00000550325 COL15A1P39059 1388 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 PES1O00541 588 aaKnown RBP13.84□□□□□ -0.19
VDR-208ENST00000550325 STX10O60499 249 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 FDPSP14324 419 aaKnown RBP13.84□□□□□ -0.19
VDR-208ENST00000550325 PDE4BQ07343 736 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 CCT5P48643 541 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 NEXNQ0ZGT2 675 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 SLC35F6Q8N357 371 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 CDC23Q9UJX2 597 aa13.84□□□□□ -0.19
VDR-208ENST00000550325 TUBGCP6Q96RT7 1819 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 COBLO75128 1261 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 TSGA10IPQ3SY00 556 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 FCHSD1Q86WN1 690 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 GRAMD1CQ8IYS0 662 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 TC2NQ8N9U0 490 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 CAPZA3Q96KX2 299 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 HSD3B7Q9H2F3 369 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 YY1AP1Q9H869 796 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 BRMS1Q9HCU9 246 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 MAP2K7O14733 419 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 YEATS4O95619 227 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms