RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 CCDC102BQ68D86 513 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 KRT40Q6A162 431 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 NRKQ7Z2Y5 1582 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 DNA2P51530 1060 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
CACNB3-209ENST00000548860 SDR42E1Q8WUS8 393 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 VAT1LQ9HCJ6 419 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 FAM170AA1A519 330 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 PFKFB2O60825 505 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 CDKL5O76039 1030 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 IGHMBP2P38935 993 aaKnown RBP16.34■□□□□ 0.21
CACNB3-209ENST00000548860 SMTNL1A8MU46 457 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 MTX1Q13505 466 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 HLFQ16534 295 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 MYSM1Q5VVJ2 828 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 CADPS2Q86UW7 1296 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 HELLSQ9NRZ9 838 aa16.34■□□□□ 0.21
CACNB3-209ENST00000548860 BTBD18B2RXH4 712 aa16.33■□□□□ 0.21
CACNB3-209ENST00000548860 PFKFB1P16118 471 aa16.33■□□□□ 0.21
CACNB3-209ENST00000548860 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.21
CACNB3-209ENST00000548860 POLR2DO15514 142 aaKnown RBP16.33■□□□□ 0.2
CACNB3-209ENST00000548860 ADKP55263 362 aaKnown RBP16.33■□□□□ 0.2
CACNB3-209ENST00000548860 WTAPQ15007 396 aa16.33■□□□□ 0.2
CACNB3-209ENST00000548860 ERCC6LQ2NKX8 1250 aa16.33■□□□□ 0.2
CACNB3-209ENST00000548860 PPFIBP1Q86W92 1011 aa16.33■□□□□ 0.2
CACNB3-209ENST00000548860 DESI2Q9BSY9 194 aa16.33■□□□□ 0.2
CACNB3-209ENST00000548860 WWC3Q9ULE0 1092 aa16.33■□□□□ 0.2
CACNB3-209ENST00000548860 CASP1P29466 404 aa16.32■□□□□ 0.2
CACNB3-209ENST00000548860 LRRC8AQ8IWT6 810 aa16.32■□□□□ 0.2
CACNB3-209ENST00000548860 APPBP2Q92624 585 aa16.32■□□□□ 0.2
CACNB3-209ENST00000548860 HINFPQ9BQA5 517 aa16.32■□□□□ 0.2
CACNB3-209ENST00000548860 DLG5Q8TDM6 1919 aa16.32■□□□□ 0.2
CACNB3-209ENST00000548860 ENOX2Q16206 610 aaKnown RBP16.32■□□□□ 0.2
CACNB3-209ENST00000548860 SEC31BQ9NQW1 1179 aa16.32■□□□□ 0.2
CACNB3-209ENST00000548860 BCAMP50895 628 aa16.32■□□□□ 0.2
CACNB3-209ENST00000548860 SENP2Q9HC62 589 aa16.32■□□□□ 0.2
CACNB3-209ENST00000548860 FANCCQ00597 558 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 PPARDQ03181 441 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 CCDC191Q8NCU4 936 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 NIP7Q9Y221 180 aaKnown RBP eCLIP16.31■□□□□ 0.2
CACNB3-209ENST00000548860 TPM1P09493 284 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 ZNF174Q15697 407 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 ARHGAP29Q52LW3 1261 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 ZMYM1Q5SVZ6 1142 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 CYP2D7A0A087X1C5 515 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 EXOC5O00471 708 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 RTN1Q16799 776 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 EPC1Q9H2F5 836 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 KIAA1468Q9P260 1216 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 ANGEL1Q9UNK9 670 aaKnown RBP16.31■□□□□ 0.2
CACNB3-209ENST00000548860 ZNF609O15014 1411 aa16.31■□□□□ 0.2
CACNB3-209ENST00000548860 SLC5A1P13866 664 aa16.3■□□□□ 0.2
CACNB3-209ENST00000548860 TMEM87AQ8NBN3 555 aa16.3■□□□□ 0.2
CACNB3-209ENST00000548860 PUF60Q9UHX1 559 aaKnown RBP16.3■□□□□ 0.2
CACNB3-209ENST00000548860 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
CACNB3-209ENST00000548860 FAM193AP78312 1265 aa16.3■□□□□ 0.2
CACNB3-209ENST00000548860 DIS3L2Q8IYB7 885 aaKnown RBP16.3■□□□□ 0.2
CACNB3-209ENST00000548860 XBP1P17861 261 aa16.3■□□□□ 0.2
CACNB3-209ENST00000548860 NAP1L1P55209 391 aaKnown RBP16.3■□□□□ 0.2
CACNB3-209ENST00000548860 TSR1Q2NL82 804 aaKnown RBP16.3■□□□□ 0.2
CACNB3-209ENST00000548860 FANCLQ9NW38 375 aa16.3■□□□□ 0.2
CACNB3-209ENST00000548860 VPS54Q9P1Q0 977 aa16.3■□□□□ 0.2
CACNB3-209ENST00000548860 ZBTB1Q9Y2K1 713 aa16.3■□□□□ 0.2
CACNB3-209ENST00000548860 ATP6V1AP38606 617 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 NR5A1Q13285 461 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 TCIRG1Q13488 830 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 SMYD4Q8IYR2 804 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-209ENST00000548860 GTF2F1P35269 517 aaKnown RBP eCLIP16.29■□□□□ 0.2
CACNB3-209ENST00000548860 SMARCE1Q969G3 411 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 SPATA31D1Q6ZQQ2 1576 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 CARMIL3Q8ND23 1372 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 FBXO18Q8NFZ0 1043 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
CACNB3-209ENST00000548860 TCHHQ07283 1943 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 FOXN1O15353 648 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 CTDNEP1O95476 244 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 CDC25AP30304 524 aa16.29■□□□□ 0.2
CACNB3-209ENST00000548860 CCDC12Q8WUD4 166 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-209ENST00000548860 FKBP15Q5T1M5 1219 aa16.28■□□□□ 0.2
CACNB3-209ENST00000548860 ARGLU1Q9NWB6 273 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-209ENST00000548860 TFCP2L1Q9NZI6 479 aa16.28■□□□□ 0.2
CACNB3-209ENST00000548860 KCNH3Q9ULD8 1083 aa16.28■□□□□ 0.2
CACNB3-209ENST00000548860 SSBP05455 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
CACNB3-209ENST00000548860 NAA16Q6N069 864 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-209ENST00000548860 ATG9AQ7Z3C6 839 aa16.28■□□□□ 0.2
CACNB3-209ENST00000548860 DSCC1Q9BVC3 393 aa16.28■□□□□ 0.2
CACNB3-209ENST00000548860 CARD6Q9BX69 1037 aa16.28■□□□□ 0.2
CACNB3-209ENST00000548860 V9GY48 417 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-209ENST00000548860 NLRP5P59047 1200 aa16.28■□□□□ 0.2
CACNB3-209ENST00000548860 KIF4BQ2VIQ3 1234 aa16.28■□□□□ 0.2
CACNB3-209ENST00000548860 STX8Q9UNK0 236 aa16.28■□□□□ 0.2
CACNB3-209ENST00000548860 VWA3AA6NCI4 1184 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 GYG1P46976 350 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 FAM182BQ5T319 152 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 TRIM34Q9BYJ4 488 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 ZHX3Q9H4I2 956 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 PIH1D3Q9NQM4 214 aaKnown RBP16.27■□□□□ 0.2
CACNB3-209ENST00000548860 PXDNQ92626 1479 aa16.27■□□□□ 0.2
CACNB3-209ENST00000548860 KIF28PB7ZC32 967 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms