RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 MEX3CQ5U5Q3 659 aaKnown RBP8.63□□□□□ -1.03
TMEM116-206ENST00000548283 CRAMP1Q96RY5 1269 aa8.63□□□□□ -1.03
TMEM116-206ENST00000548283 CALR3Q96L12 384 aaKnown RBP8.62□□□□□ -1.03
TMEM116-206ENST00000548283 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
TMEM116-206ENST00000548283 UQCRFS1P1P0C7P4 283 aa8.62□□□□□ -1.03
TMEM116-206ENST00000548283 DPH6Q7L8W6 267 aa8.62□□□□□ -1.03
TMEM116-206ENST00000548283 RUFY2Q8WXA3 655 aa8.62□□□□□ -1.03
TMEM116-206ENST00000548283 MTA3Q9BTC8 594 aa8.62□□□□□ -1.03
TMEM116-206ENST00000548283 SNX14Q9Y5W7 946 aa8.62□□□□□ -1.03
TMEM116-206ENST00000548283 CREB3O43889 395 aa8.62□□□□□ -1.03
TMEM116-206ENST00000548283 TXNRD1Q16881 649 aa8.62□□□□□ -1.03
TMEM116-206ENST00000548283 ZNF827Q17R98 1081 aa8.62□□□□□ -1.03
TMEM116-206ENST00000548283 PAG1Q9NWQ8 432 aa8.62□□□□□ -1.03
TMEM116-206ENST00000548283 NIP7Q9Y221 180 aaKnown RBP eCLIP8.62□□□□□ -1.03
TMEM116-206ENST00000548283 MCAMP43121 646 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 NFIXQ14938 502 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 TTF1Q15361 905 aaPredicted RBP8.61□□□□□ -1.03
TMEM116-206ENST00000548283 TRAPPC3LQ5T215 181 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 L1TD1Q5T7N2 865 aaKnown RBP8.61□□□□□ -1.03
TMEM116-206ENST00000548283 PDLIM2Q96JY6 352 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 ROBO3Q96MS0 1386 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 A0A0D9SFI3 127 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 PPFIA4O75335 1185 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
TMEM116-206ENST00000548283 RXRBP28702 533 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 ZNF594Q96JF6 807 aaPredicted RBP8.61□□□□□ -1.03
TMEM116-206ENST00000548283 RTFDC1Q9BY42 306 aaPredicted RBP8.61□□□□□ -1.03
TMEM116-206ENST00000548283 SLX4Q8IY92 1834 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 WDHD1O75717 1129 aaPredicted RBP8.61□□□□□ -1.03
TMEM116-206ENST00000548283 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.03
TMEM116-206ENST00000548283 MINPP1Q9UNW1 487 aa8.61□□□□□ -1.03
TMEM116-206ENST00000548283 IQSEC3Q9UPP2 1182 aaPredicted RBP8.61□□□□□ -1.03
TMEM116-206ENST00000548283 K7ELQ4 463 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-206ENST00000548283 ADD2P35612 726 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 DDR1Q08345 913 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 NMIQ13287 307 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-206ENST00000548283 MCMDC2Q4G0Z9 681 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 CCDC181Q5TID7 509 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 PRR5LQ6MZQ0 368 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 POTEAQ6S8J7 498 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 GOLGA6L3A6NEY3 463 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 RNF113AO15541 343 aaKnown RBP8.6□□□□□ -1.03
TMEM116-206ENST00000548283 IL1R1P14778 569 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 FKBP1AP62942 108 aaKnown RBP8.6□□□□□ -1.03
TMEM116-206ENST00000548283 EXOSC10Q01780 885 aaKnown RBP8.6□□□□□ -1.03
TMEM116-206ENST00000548283 GRAPQ13588 217 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 RAB3GAP1Q15042 981 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 TSHZ3Q63HK5 1081 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 GET4Q7L5D6 327 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-206ENST00000548283 HELBQ8NG08 1087 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-206ENST00000548283 GRAPLQ8TC17 118 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-206ENST00000548283 CEP126Q9P2H0 1117 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 ANAPC4Q9UJX5 808 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 PALD1Q9ULE6 856 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 POM121CA8CG34 1229 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 PTH1RQ03431 593 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 NAALADL2Q58DX5 795 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 WDR78Q5VTH9 848 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 GPIHBP1Q8IV16 184 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 NME8Q8N427 588 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 ANKRD2Q9GZV1 360 aa8.6□□□□□ -1.03
TMEM116-206ENST00000548283 GNPATO15228 680 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 SLC5A1P13866 664 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 ADORA1P30542 326 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 MLLT3P42568 568 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-206ENST00000548283 MRE11P49959 708 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 BECN1Q14457 450 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 ATP2B3Q16720 1220 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 CCDC102BQ68D86 513 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 CCDC8Q9H0W5 538 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-206ENST00000548283 PDCL3Q9H2J4 239 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 LOC285556D6RIA3 1793 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 ADAMTSL1Q8N6G6 1762 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 MAST3O60307 1309 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 MYH2Q9UKX2 1941 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 CHRNDQ07001 517 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 TTLL12Q14166 644 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-206ENST00000548283 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 TNPO1Q92973 898 aaKnown RBP8.59□□□□□ -1.03
TMEM116-206ENST00000548283 IGSF5Q9NSI5 407 aa8.59□□□□□ -1.03
TMEM116-206ENST00000548283 OFD1O75665 1012 aa8.59□□□□□ -1.04
TMEM116-206ENST00000548283 SCARF1Q14162 830 aa8.59□□□□□ -1.04
TMEM116-206ENST00000548283 ZNF589Q86UQ0 364 aaPredicted RBP8.59□□□□□ -1.04
TMEM116-206ENST00000548283 JARID2Q92833 1246 aaPredicted RBP8.59□□□□□ -1.04
TMEM116-206ENST00000548283 SYTL4Q96C24 671 aaPredicted RBP8.59□□□□□ -1.04
TMEM116-206ENST00000548283 LEMD3Q9Y2U8 911 aa8.59□□□□□ -1.04
TMEM116-206ENST00000548283 RINLQ6ZS11 566 aa8.58□□□□□ -1.04
TMEM116-206ENST00000548283 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
TMEM116-206ENST00000548283 SRP68Q9UHB9 627 aaKnown RBP8.58□□□□□ -1.04
TMEM116-206ENST00000548283 SLC27A2O14975 620 aa8.58□□□□□ -1.04
TMEM116-206ENST00000548283 LDHAL6AQ6ZMR3 332 aa8.58□□□□□ -1.04
TMEM116-206ENST00000548283 FAM227BQ96M60 508 aa8.58□□□□□ -1.04
TMEM116-206ENST00000548283 NBPF3Q9H094 633 aa8.58□□□□□ -1.04
TMEM116-206ENST00000548283 MKRN1Q9UHC7 482 aaKnown RBP8.58□□□□□ -1.04
TMEM116-206ENST00000548283 DHX16O60231 1041 aaKnown RBP8.58□□□□□ -1.04
TMEM116-206ENST00000548283 NOVP48745 357 aa8.58□□□□□ -1.04
TMEM116-206ENST00000548283 RUFY3Q7L099 469 aa8.58□□□□□ -1.04
TMEM116-206ENST00000548283 RASEFQ8IZ41 740 aa8.58□□□□□ -1.04
TMEM116-206ENST00000548283 ZNF710Q8N1W2 664 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms