RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TCRBV5S4A2TA0A5A2 114 aa14.17□□□□□ -0.14
CCDC38-202ENST00000546386 MAP3K12Q12852 859 aa14.17□□□□□ -0.14
CCDC38-202ENST00000546386 SF3B3Q15393 1217 aaKnown RBP14.17□□□□□ -0.14
CCDC38-202ENST00000546386 IMMTQ16891 758 aaKnown RBP14.17□□□□□ -0.14
CCDC38-202ENST00000546386 FBXW7Q969H0 707 aa14.17□□□□□ -0.14
CCDC38-202ENST00000546386 FTOQ9C0B1 505 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC38-202ENST00000546386 AATFQ9NY61 560 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC38-202ENST00000546386 SLC4A4Q9Y6R1 1079 aa14.17□□□□□ -0.14
CCDC38-202ENST00000546386 CAVIN4Q5BKX8 364 aa14.17□□□□□ -0.14
CCDC38-202ENST00000546386 CYB5R4Q7L1T6 521 aa14.17□□□□□ -0.14
CCDC38-202ENST00000546386 DHX32Q7L7V1 743 aaKnown RBP14.17□□□□□ -0.14
CCDC38-202ENST00000546386 USP48Q86UV5 1035 aa14.17□□□□□ -0.14
CCDC38-202ENST00000546386 STRBPQ96SI9 672 aaKnown RBP14.17□□□□□ -0.14
CCDC38-202ENST00000546386 DSCC1Q9BVC3 393 aa14.17□□□□□ -0.14
CCDC38-202ENST00000546386 TM6SF1Q9BZW5 370 aa14.17□□□□□ -0.14
CCDC38-202ENST00000546386 AKAP11Q9UKA4 1901 aa14.16□□□□□ -0.14
CCDC38-202ENST00000546386 GOLGA6L22H0YM25 854 aa14.16□□□□□ -0.14
CCDC38-202ENST00000546386 EN1Q05925 392 aaPredicted RBP14.16□□□□□ -0.14
CCDC38-202ENST00000546386 COL23A1Q86Y22 540 aaPredicted RBP14.16□□□□□ -0.14
CCDC38-202ENST00000546386 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.16□□□□□ -0.14
CCDC38-202ENST00000546386 DDX60Q8IY21 1712 aaKnown RBP14.16□□□□□ -0.14
CCDC38-202ENST00000546386 PRC1O43663 620 aa14.16□□□□□ -0.14
CCDC38-202ENST00000546386 TDO2P48775 406 aa14.16□□□□□ -0.14
CCDC38-202ENST00000546386 DIXDC1Q155Q3 683 aa14.16□□□□□ -0.14
CCDC38-202ENST00000546386 POTEAQ6S8J7 498 aa14.16□□□□□ -0.14
CCDC38-202ENST00000546386 RPGRQ92834 1020 aaKnown RBP14.16□□□□□ -0.14
CCDC38-202ENST00000546386 NYXQ9GZU5 481 aa14.16□□□□□ -0.14
CCDC38-202ENST00000546386 MTMR7Q9Y216 660 aa14.16□□□□□ -0.14
CCDC38-202ENST00000546386 NEDD4P46934 1319 aa14.16□□□□□ -0.14
CCDC38-202ENST00000546386 UQCRFS1P1P0C7P4 283 aa14.15□□□□□ -0.14
CCDC38-202ENST00000546386 ANTXR2P58335 489 aa14.15□□□□□ -0.14
CCDC38-202ENST00000546386 INTS4Q96HW7 963 aaKnown RBP14.15□□□□□ -0.14
CCDC38-202ENST00000546386 NAPBQ9H115 298 aa14.15□□□□□ -0.14
CCDC38-202ENST00000546386 COL1A1P02452 1464 aaPredicted RBP14.15□□□□□ -0.14
CCDC38-202ENST00000546386 F8W031 263 aaPredicted RBP14.15□□□□□ -0.14
CCDC38-202ENST00000546386 ZSCAN22P10073 491 aaPredicted RBP14.15□□□□□ -0.14
CCDC38-202ENST00000546386 AIFM3Q96NN9 605 aa14.15□□□□□ -0.14
CCDC38-202ENST00000546386 MXD3Q9BW11 206 aa14.15□□□□□ -0.14
CCDC38-202ENST00000546386 ZNF804BA4D1E1 1349 aa14.15□□□□□ -0.14
CCDC38-202ENST00000546386 CTDNEP1O95476 244 aa14.14□□□□□ -0.15
CCDC38-202ENST00000546386 TTF1Q15361 905 aaPredicted RBP14.14□□□□□ -0.15
CCDC38-202ENST00000546386 RALYLQ86SE5 291 aaKnown RBP14.14□□□□□ -0.15
CCDC38-202ENST00000546386 MICU3Q86XE3 530 aa14.14□□□□□ -0.15
CCDC38-202ENST00000546386 IFNL3Q8IZI9 196 aa14.14□□□□□ -0.15
CCDC38-202ENST00000546386 MTMR6Q9Y217 621 aa14.14□□□□□ -0.15
CCDC38-202ENST00000546386 COL5A3P25940 1745 aaPredicted RBP14.14□□□□□ -0.15
CCDC38-202ENST00000546386 KLF18A0A0U1RQI7 1052 aa14.14□□□□□ -0.15
CCDC38-202ENST00000546386 GSG1L2A8MUP6 293 aa14.14□□□□□ -0.15
CCDC38-202ENST00000546386 HIBADHP31937 336 aaKnown RBP14.14□□□□□ -0.15
CCDC38-202ENST00000546386 RGS17Q9UGC6 210 aaPredicted RBP14.14□□□□□ -0.15
CCDC38-202ENST00000546386 C6orf229H3BNL8 230 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 ZFYP08048 801 aaPredicted RBP14.13□□□□□ -0.15
CCDC38-202ENST00000546386 RXRBP28702 533 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 ADD1P35611 737 aaKnown RBP14.13□□□□□ -0.15
CCDC38-202ENST00000546386 GPSM2P81274 684 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.13□□□□□ -0.15
CCDC38-202ENST00000546386 TMEM63CQ9P1W3 806 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 BRWD3Q6RI45 1802 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 BAZ2BQ9UIF8 2168 aaKnown RBP14.13□□□□□ -0.15
CCDC38-202ENST00000546386 hCG_1642624A0A1W2PR95 340 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 SYCE3A1L190 88 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 PDIA3P30101 505 aaKnown RBP14.13□□□□□ -0.15
CCDC38-202ENST00000546386 RBM6P78332 1123 aaKnown RBP14.13□□□□□ -0.15
CCDC38-202ENST00000546386 EXOSC10Q01780 885 aaKnown RBP14.13□□□□□ -0.15
CCDC38-202ENST00000546386 KRT32Q14532 448 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 DEFB132Q7Z7B7 95 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 RNF214Q8ND24 703 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 PIBF1Q8WXW3 757 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 PHKBQ93100 1093 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 THSD7AQ9UPZ6 1657 aa14.13□□□□□ -0.15
CCDC38-202ENST00000546386 WDR33Q9C0J8 1336 aaKnown RBP14.12□□□□□ -0.15
CCDC38-202ENST00000546386 UFL1O94874 794 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 F13A1P00488 732 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 CYP2D6P10635 497 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 XRCC6P12956 609 aaKnown RBP eCLIP14.12□□□□□ -0.15
CCDC38-202ENST00000546386 MECOMQ03112 1051 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 EZH2Q15910 746 aaKnown RBP14.12□□□□□ -0.15
CCDC38-202ENST00000546386 SLC10A5Q5PT55 438 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 GTF3C6Q969F1 213 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 IL17RAQ96F46 866 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 GOLGA8BA8MQT2 603 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 MMP10P09238 476 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 TSGA10IPQ3SY00 556 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 FAM184AQ8NB25 1140 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 ZSWIM5Q9P217 1185 aa14.12□□□□□ -0.15
CCDC38-202ENST00000546386 PTPDC1A2A3K4 754 aa14.11□□□□□ -0.15
CCDC38-202ENST00000546386 GOLGA6L3A6NEY3 463 aa14.11□□□□□ -0.15
CCDC38-202ENST00000546386 NMT2O60551 498 aa14.11□□□□□ -0.15
CCDC38-202ENST00000546386 UBE3CQ15386 1083 aa14.11□□□□□ -0.15
CCDC38-202ENST00000546386 NAA16Q6N069 864 aaPredicted RBP14.11□□□□□ -0.15
CCDC38-202ENST00000546386 H3BQV1 296 aa14.11□□□□□ -0.15
CCDC38-202ENST00000546386 EPB41L2O43491 1005 aaKnown RBP14.11□□□□□ -0.15
CCDC38-202ENST00000546386 SLURP2P0DP57 97 aa14.11□□□□□ -0.15
CCDC38-202ENST00000546386 IFFO2Q5TF58 517 aa14.11□□□□□ -0.15
CCDC38-202ENST00000546386 NFXL1Q6ZNB6 911 aa14.11□□□□□ -0.15
CCDC38-202ENST00000546386 ZNF622Q969S3 477 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC38-202ENST00000546386 ZSCAN31Q96LW9 406 aaPredicted RBP14.11□□□□□ -0.15
CCDC38-202ENST00000546386 ANO8Q9HCE9 1232 aaPredicted RBP14.11□□□□□ -0.15
CCDC38-202ENST00000546386 KCNQ5Q9NR82 932 aa14.11□□□□□ -0.15
CCDC38-202ENST00000546386 SH2B1Q9NRF2 756 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms