RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 RNF187Q5TA31 235 aaPredicted RBP14.19□□□□□ -0.14
COL4A6-209ENST00000545689 APPBP2Q92624 585 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 USP19O94966 1318 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 PLEKHG3A1L390 1219 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 HSPA4P34932 840 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 DTHD1Q6ZMT9 781 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 HDAC9Q9UKV0 1011 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 PUM3Q15397 648 aaKnown RBP14.18□□□□□ -0.14
COL4A6-209ENST00000545689 FERMT1Q9BQL6 677 aa14.18□□□□□ -0.14
COL4A6-209ENST00000545689 PLCD4Q9BRC7 762 aa14.18□□□□□ -0.14
COL4A6-209ENST00000545689 IMPACTQ9P2X3 320 aa14.18□□□□□ -0.14
COL4A6-209ENST00000545689 WDHD1O75717 1129 aaPredicted RBP14.18□□□□□ -0.14
COL4A6-209ENST00000545689 PRPF4BQ13523 1007 aaKnown RBP14.18□□□□□ -0.14
COL4A6-209ENST00000545689 CCDC94Q9BW85 323 aaPredicted RBP14.18□□□□□ -0.14
COL4A6-209ENST00000545689 PLCD1P51178 756 aa14.18□□□□□ -0.14
COL4A6-209ENST00000545689 TERF1P54274 439 aa14.18□□□□□ -0.14
COL4A6-209ENST00000545689 FSD2A1L4K1 749 aa14.18□□□□□ -0.14
COL4A6-209ENST00000545689 CCDC42Q96M95 316 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 NSRP1Q9H0G5 558 aaKnown RBP14.17□□□□□ -0.14
COL4A6-209ENST00000545689 A0A1B0GUL7 405 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 CUTAO60888 179 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 ANO1Q5XXA6 986 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 UBXN1Q04323 297 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 NEK11Q8NG66 645 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 SLC52A2Q9HAB3 445 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 SAMM50Q9Y512 469 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 KBTBD3Q8NAB2 608 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 SMARCC2Q8TAQ2 1214 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 RBSNQ9H1K0 784 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 KCNA6P17658 529 aa14.17□□□□□ -0.14
COL4A6-209ENST00000545689 SPDYE4A6NLX3 237 aa14.16□□□□□ -0.14
COL4A6-209ENST00000545689 AKR1B15C9JRZ8 316 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-209ENST00000545689 OTUD7AQ8TE49 926 aaPredicted RBP14.16□□□□□ -0.14
COL4A6-209ENST00000545689 TIGD1Q96MW7 591 aa14.16□□□□□ -0.14
COL4A6-209ENST00000545689 MCM9Q9NXL9 1143 aa14.16□□□□□ -0.14
COL4A6-209ENST00000545689 ERO1AQ96HE7 468 aa14.16□□□□□ -0.14
COL4A6-209ENST00000545689 STK24Q9Y6E0 443 aa14.16□□□□□ -0.14
COL4A6-209ENST00000545689 AATKQ6ZMQ8 1374 aa14.16□□□□□ -0.14
COL4A6-209ENST00000545689 MBD4O95243 580 aa14.16□□□□□ -0.14
COL4A6-209ENST00000545689 LDHBP07195 334 aaKnown RBP14.16□□□□□ -0.14
COL4A6-209ENST00000545689 ZSWIM4Q9H7M6 989 aa14.16□□□□□ -0.14
COL4A6-209ENST00000545689 ANGEL1Q9UNK9 670 aaKnown RBP14.16□□□□□ -0.14
COL4A6-209ENST00000545689 LUC7L2Q9Y383 392 aaKnown RBP14.16□□□□□ -0.14
COL4A6-209ENST00000545689 LIG1P18858 919 aa14.16□□□□□ -0.14
COL4A6-209ENST00000545689 DSCC1Q9BVC3 393 aa14.16□□□□□ -0.14
COL4A6-209ENST00000545689 STAMBPO95630 424 aa14.15□□□□□ -0.14
COL4A6-209ENST00000545689 PDE8AO60658 829 aa14.15□□□□□ -0.14
COL4A6-209ENST00000545689 BAG1Q99933 345 aaPredicted RBP14.15□□□□□ -0.14
COL4A6-209ENST00000545689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL4A6-209ENST00000545689 CHST3Q7LGC8 479 aa14.15□□□□□ -0.14
COL4A6-209ENST00000545689 ABCA8O94911 1581 aa14.15□□□□□ -0.14
COL4A6-209ENST00000545689 MACROD2A1Z1Q3 448 aa14.15□□□□□ -0.14
COL4A6-209ENST00000545689 BICD1Q96G01 975 aa14.15□□□□□ -0.14
COL4A6-209ENST00000545689 GLT8D2Q9H1C3 349 aa14.15□□□□□ -0.14
COL4A6-209ENST00000545689 MMRN2Q9H8L6 949 aa14.15□□□□□ -0.14
COL4A6-209ENST00000545689 OGFRQ9NZT2 677 aa14.15□□□□□ -0.14
COL4A6-209ENST00000545689 KDRP35968 1356 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 ZFYVE16Q7Z3T8 1539 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 SPDYE3A6NKU9 549 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 TRMT2AQ8IZ69 625 aaKnown RBP14.14□□□□□ -0.15
COL4A6-209ENST00000545689 MCM7P33993 719 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 CCDC77Q9BR77 488 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 ATP7BP35670 1465 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 PARP1P09874 1014 aaKnown RBP14.14□□□□□ -0.15
COL4A6-209ENST00000545689 ACTN2P35609 894 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 MLKLQ8NB16 471 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 TTF2Q9UNY4 1162 aaKnown RBP14.14□□□□□ -0.15
COL4A6-209ENST00000545689 SHROOM2Q13796 1616 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 TTC6Q86TZ1 520 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 XAGE2Q96GT9 111 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 IQSEC3Q9UPP2 1182 aaPredicted RBP14.14□□□□□ -0.15
COL4A6-209ENST00000545689 MBD5Q9P267 1494 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 ATP5JP18859 108 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 GCKRQ14397 625 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 EYA3Q99504 573 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 LMBRD1Q9NUN5 540 aa14.14□□□□□ -0.15
COL4A6-209ENST00000545689 BRD1O95696 1058 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 ITGA6P23229 1130 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
COL4A6-209ENST00000545689 LEO1Q8WVC0 666 aaPredicted RBP14.13□□□□□ -0.15
COL4A6-209ENST00000545689 ZNF622Q969S3 477 aaKnown RBP eCLIP14.13□□□□□ -0.15
COL4A6-209ENST00000545689 SUCLG2Q96I99 432 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 ZNF75DP51815 510 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 NLRP12P59046 1061 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 MIGA1Q8NAN2 632 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 DBNDD2Q9BQY9 259 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 RTCBQ9Y3I0 505 aaKnown RBP14.13□□□□□ -0.15
COL4A6-209ENST00000545689 RPL13P26373 211 aaKnown RBP14.13□□□□□ -0.15
COL4A6-209ENST00000545689 VWA3BQ502W6 1294 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 CCDC129Q6ZRS4 1044 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 KCNH3Q9ULD8 1083 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 SYT10Q6XYQ8 523 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 SV2BQ7L1I2 683 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 MROH5Q6ZUA9 1318 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 TARBP1Q13395 1621 aaKnown RBP14.13□□□□□ -0.15
COL4A6-209ENST00000545689 SH3TC1Q8TE82 1336 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 A0A1B0GVL5 298 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 FAM13AO94988 1023 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 HS2ST1Q7LGA3 356 aa14.13□□□□□ -0.15
COL4A6-209ENST00000545689 SSH3Q8TE77 659 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms