RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.52■■□□□ 1.19
BPTF-208ENST00000544778 TSGA10Q9BZW7 698 aa22.51■■□□□ 1.19
BPTF-208ENST00000544778 STK10O94804 968 aaKnown RBP22.51■■□□□ 1.19
BPTF-208ENST00000544778 UVSSAQ2YD98 709 aa22.51■■□□□ 1.19
BPTF-208ENST00000544778 KRT222Q8N1A0 295 aa22.51■■□□□ 1.19
BPTF-208ENST00000544778 NOP56O00567 594 aaKnown RBP22.51■■□□□ 1.19
BPTF-208ENST00000544778 MAEAQ7L5Y9 396 aa22.51■■□□□ 1.19
BPTF-208ENST00000544778 DNAJC25Q9H1X3 360 aa22.51■■□□□ 1.19
BPTF-208ENST00000544778 VIMP08670 466 aaKnown RBP22.51■■□□□ 1.19
BPTF-208ENST00000544778 BEGAINQ9BUH8 593 aa22.51■■□□□ 1.19
BPTF-208ENST00000544778 KIF3CO14782 793 aa22.51■■□□□ 1.19
BPTF-208ENST00000544778 XAGE3Q8WTP9 111 aa22.51■■□□□ 1.19
BPTF-208ENST00000544778 RBM8AQ9Y5S9 174 aaKnown RBP22.51■■□□□ 1.19
BPTF-208ENST00000544778 GPCPD1Q9NPB8 672 aa22.5■■□□□ 1.19
BPTF-208ENST00000544778 CAPN2P17655 700 aa22.5■■□□□ 1.19
BPTF-208ENST00000544778 GPR161Q8N6U8 529 aaKnown RBP22.5■■□□□ 1.19
BPTF-208ENST00000544778 CAVIN2O95810 425 aa22.5■■□□□ 1.19
BPTF-208ENST00000544778 RXRAP19793 462 aa22.5■■□□□ 1.19
BPTF-208ENST00000544778 USP48Q86UV5 1035 aa22.5■■□□□ 1.19
BPTF-208ENST00000544778 LDHBP07195 334 aaKnown RBP22.5■■□□□ 1.19
BPTF-208ENST00000544778 WASLO00401 505 aaPredicted RBP22.5■■□□□ 1.19
BPTF-208ENST00000544778 STRN3Q13033 797 aa22.5■■□□□ 1.19
BPTF-208ENST00000544778 RTCBQ9Y3I0 505 aaKnown RBP22.5■■□□□ 1.19
BPTF-208ENST00000544778 SPOPO43791 374 aa22.49■■□□□ 1.19
BPTF-208ENST00000544778 CCDC184Q52MB2 194 aa22.49■■□□□ 1.19
BPTF-208ENST00000544778 GKAP1Q5VSY0 366 aaPredicted RBP22.49■■□□□ 1.19
BPTF-208ENST00000544778 ZBTB24O43167 697 aaPredicted RBP22.49■■□□□ 1.19
BPTF-208ENST00000544778 NBPF14Q5TI25 921 aa22.49■■□□□ 1.19
BPTF-208ENST00000544778 PAG1Q9NWQ8 432 aa22.49■■□□□ 1.19
BPTF-208ENST00000544778 CLGNO14967 610 aa22.49■■□□□ 1.19
BPTF-208ENST00000544778 PARP1P09874 1014 aaKnown RBP22.49■■□□□ 1.19
BPTF-208ENST00000544778 PLCG2P16885 1265 aa22.49■■□□□ 1.19
BPTF-208ENST00000544778 UBAP1LF5GYI3 381 aa22.49■■□□□ 1.19
BPTF-208ENST00000544778 GNA11P29992 359 aa22.49■■□□□ 1.19
BPTF-208ENST00000544778 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 SLC39A6Q13433 755 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 CCDC89Q8N998 374 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 NKIRAS1Q9NYS0 192 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 SMTNP53814 917 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 SDCCAG8Q86SQ7 713 aaPredicted RBP22.48■■□□□ 1.19
BPTF-208ENST00000544778 ZKSCAN3Q9BRR0 538 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 TTC21BQ7Z4L5 1316 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 CCDC170Q8IYT3 715 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 BRDTQ58F21 947 aaPredicted RBP22.48■■□□□ 1.19
BPTF-208ENST00000544778 FMNL3Q8IVF7 1028 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 TMX3Q96JJ7 454 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 DAPK1P53355 1430 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 DZIP3Q86Y13 1208 aaKnown RBP22.48■■□□□ 1.19
BPTF-208ENST00000544778 CEBPAP49715 358 aaPredicted RBP22.48■■□□□ 1.19
BPTF-208ENST00000544778 CSRNP2Q9H175 543 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 CTNND2Q9UQB3 1225 aa22.48■■□□□ 1.19
BPTF-208ENST00000544778 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
BPTF-208ENST00000544778 RNASE9P60153 205 aaKnown RBP22.47■■□□□ 1.19
BPTF-208ENST00000544778 MIPOL1Q8TD10 442 aa22.47■■□□□ 1.19
BPTF-208ENST00000544778 DDX39AO00148 427 aaKnown RBP22.47■■□□□ 1.19
BPTF-208ENST00000544778 MYCLP12524 364 aaPredicted RBP22.47■■□□□ 1.19
BPTF-208ENST00000544778 COPS6Q7L5N1 327 aa22.47■■□□□ 1.19
BPTF-208ENST00000544778 AFAP1L2Q8N4X5 818 aa22.47■■□□□ 1.19
BPTF-208ENST00000544778 HELBQ8NG08 1087 aaPredicted RBP22.47■■□□□ 1.19
BPTF-208ENST00000544778 NSMCE1Q8WV22 266 aa22.47■■□□□ 1.19
BPTF-208ENST00000544778 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
BPTF-208ENST00000544778 IFT74Q96LB3 600 aa22.47■■□□□ 1.19
BPTF-208ENST00000544778 RPL13P26373 211 aaKnown RBP22.47■■□□□ 1.19
BPTF-208ENST00000544778 ZYXQ15942 572 aaKnown RBP22.47■■□□□ 1.19
BPTF-208ENST00000544778 NUF2Q9BZD4 464 aa22.47■■□□□ 1.19
BPTF-208ENST00000544778 CCT6AP40227 531 aaKnown RBP22.47■■□□□ 1.19
BPTF-208ENST00000544778 RHPN1Q8TCX5 695 aa22.47■■□□□ 1.19
BPTF-208ENST00000544778 MBIPQ9NS73 344 aa22.47■■□□□ 1.19
BPTF-208ENST00000544778 CCNT1O60563 726 aaKnown RBP22.46■■□□□ 1.19
BPTF-208ENST00000544778 GNAT2P19087 354 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 CASC4Q6P4E1 433 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 TNNC1P63316 161 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 ATP11AP98196 1134 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 DIXDC1Q155Q3 683 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 FYB2Q5VWT5 728 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 FCHSD1Q86WN1 690 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 ANO3Q9BYT9 981 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 ATP5DP30049 168 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 CCDC125Q86Z20 511 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 CCDC26Q8TAB7 109 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 SPTLC2O15270 562 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 VAV2P52735 878 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 CCDC186Q7Z3E2 898 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 WDR66Q8TBY9 1149 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 TNFAIP3P21580 790 aa22.46■■□□□ 1.19
BPTF-208ENST00000544778 LACTBP83111 547 aaPredicted RBP22.46■■□□□ 1.19
BPTF-208ENST00000544778 SV2BQ7L1I2 683 aa22.45■■□□□ 1.18
BPTF-208ENST00000544778 TPTE2Q6XPS3 522 aa22.45■■□□□ 1.18
BPTF-208ENST00000544778 PTPDC1A2A3K4 754 aa22.45■■□□□ 1.18
BPTF-208ENST00000544778 GABPB2Q8TAK5 448 aaPredicted RBP22.45■■□□□ 1.18
BPTF-208ENST00000544778 EIF6P56537 245 aaKnown RBP22.45■■□□□ 1.18
BPTF-208ENST00000544778 LETM2Q2VYF4 491 aa22.45■■□□□ 1.18
BPTF-208ENST00000544778 GBP7Q8N8V2 638 aaPredicted RBP22.45■■□□□ 1.18
BPTF-208ENST00000544778 DNM1Q05193 864 aaKnown RBP22.45■■□□□ 1.18
BPTF-208ENST00000544778 HPDP32754 393 aaPredicted RBP22.45■■□□□ 1.18
BPTF-208ENST00000544778 DACT1Q9NYF0 836 aa22.45■■□□□ 1.18
BPTF-208ENST00000544778 NEDD9Q14511 834 aa22.44■■□□□ 1.18
BPTF-208ENST00000544778 APOBRQ0VD83 1088 aa22.44■■□□□ 1.18
BPTF-208ENST00000544778 LMBR1LQ6UX01 489 aa22.44■■□□□ 1.18
BPTF-208ENST00000544778 TRAF5O00463 557 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms