RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 TNRC6CQ9HCJ0 1690 aaKnown RBP18.95■□□□□ 0.62
SPDEF-202ENST00000544425 GSG1L2A8MUP6 293 aa18.95■□□□□ 0.62
SPDEF-202ENST00000544425 DDR1Q08345 913 aa18.95■□□□□ 0.62
SPDEF-202ENST00000544425 TRDNQ13061 729 aa18.95■□□□□ 0.62
SPDEF-202ENST00000544425 LARP1BQ659C4 914 aaKnown RBP18.95■□□□□ 0.62
SPDEF-202ENST00000544425 C15orf52Q6ZUT6 534 aaKnown RBP18.95■□□□□ 0.62
SPDEF-202ENST00000544425 RALYLQ86SE5 291 aaKnown RBP18.95■□□□□ 0.62
SPDEF-202ENST00000544425 ARMT1Q9H993 441 aa18.95■□□□□ 0.62
SPDEF-202ENST00000544425 ABCF2Q9UG63 623 aa18.95■□□□□ 0.62
SPDEF-202ENST00000544425 CASZ1Q86V15 1759 aa18.95■□□□□ 0.62
SPDEF-202ENST00000544425 PRPF40AO75400 957 aaKnown RBP18.94■□□□□ 0.62
SPDEF-202ENST00000544425 BBOX1O75936 387 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 F13A1P00488 732 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 CYP7A1P22680 504 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 KLRK1P26718 216 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 STK3Q13188 491 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 NACAP1Q9BZK3 213 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 NBPF3Q9H094 633 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 RAI14Q9P0K7 980 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 DDX49Q9Y6V7 483 aaKnown RBP18.94■□□□□ 0.62
SPDEF-202ENST00000544425 COL1A1P02452 1464 aaPredicted RBP18.94■□□□□ 0.62
SPDEF-202ENST00000544425 XDHP47989 1333 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 APOBRQ0VD83 1088 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 SCRN1Q12765 414 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 ZNF827Q17R98 1081 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 SMARCC2Q8TAQ2 1214 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 NAPBQ9H115 298 aa18.94■□□□□ 0.62
SPDEF-202ENST00000544425 EPB41L4AQ9HCS5 686 aaPredicted RBP18.94■□□□□ 0.62
SPDEF-202ENST00000544425 PRC1O43663 620 aa18.93■□□□□ 0.62
SPDEF-202ENST00000544425 PDIA3P30101 505 aaKnown RBP18.93■□□□□ 0.62
SPDEF-202ENST00000544425 ILDR1Q86SU0 546 aaPredicted RBP18.93■□□□□ 0.62
SPDEF-202ENST00000544425 LCORLQ8N3X6 602 aa18.93■□□□□ 0.62
SPDEF-202ENST00000544425 CRAMP1Q96RY5 1269 aa18.93■□□□□ 0.62
SPDEF-202ENST00000544425 ANKIB1Q9P2G1 1089 aa18.93■□□□□ 0.62
SPDEF-202ENST00000544425 TAF1P21675 1872 aa18.93■□□□□ 0.62
SPDEF-202ENST00000544425 SLC4A4Q9Y6R1 1079 aa18.92■□□□□ 0.62
SPDEF-202ENST00000544425 ANTXR2P58335 489 aa18.92■□□□□ 0.62
SPDEF-202ENST00000544425 CHST3Q7LGC8 479 aa18.92■□□□□ 0.62
SPDEF-202ENST00000544425 COL23A1Q86Y22 540 aaPredicted RBP18.92■□□□□ 0.62
SPDEF-202ENST00000544425 TBC1D10CQ8IV04 446 aa18.92■□□□□ 0.62
SPDEF-202ENST00000544425 RIOK1Q9BRS2 568 aaKnown RBP18.92■□□□□ 0.62
SPDEF-202ENST00000544425 GZF1Q9H116 711 aaPredicted RBP18.92■□□□□ 0.62
SPDEF-202ENST00000544425 MAGEB6P1A0A0J9YX57 407 aa18.91■□□□□ 0.62
SPDEF-202ENST00000544425 HMGN5P82970 282 aaKnown RBP18.91■□□□□ 0.62
SPDEF-202ENST00000544425 NAA16Q6N069 864 aaPredicted RBP18.91■□□□□ 0.62
SPDEF-202ENST00000544425 TMC4Q7Z404 712 aa18.91■□□□□ 0.62
SPDEF-202ENST00000544425 TXNRD3Q86VQ6 643 aa18.91■□□□□ 0.62
SPDEF-202ENST00000544425 TMEM87AQ8NBN3 555 aa18.91■□□□□ 0.62
SPDEF-202ENST00000544425 ATP2B4P23634 1241 aa18.9■□□□□ 0.62
SPDEF-202ENST00000544425 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
SPDEF-202ENST00000544425 ADGRA1Q86SQ6 560 aa18.9■□□□□ 0.62
SPDEF-202ENST00000544425 NSUN4Q96CB9 384 aaKnown RBP18.9■□□□□ 0.62
SPDEF-202ENST00000544425 SALL1Q9NSC2 1324 aa18.9■□□□□ 0.62
SPDEF-202ENST00000544425 PRKAB2O43741 272 aa18.9■□□□□ 0.62
SPDEF-202ENST00000544425 SPTY2D1Q68D10 685 aaPredicted RBP18.9■□□□□ 0.62
SPDEF-202ENST00000544425 MIGA1Q8NAN2 632 aa18.9■□□□□ 0.62
SPDEF-202ENST00000544425 NSUN7Q8NE18 718 aaKnown RBP18.9■□□□□ 0.62
SPDEF-202ENST00000544425 TDRD7Q8NHU6 1098 aaKnown RBP18.9■□□□□ 0.62
SPDEF-202ENST00000544425 CHAMP1Q96JM3 812 aa18.9■□□□□ 0.62
SPDEF-202ENST00000544425 BRIP1Q9BX63 1249 aa18.9■□□□□ 0.62
SPDEF-202ENST00000544425 CNNM2Q9H8M5 875 aa18.9■□□□□ 0.62
SPDEF-202ENST00000544425 PODXL2Q9NZ53 605 aa18.9■□□□□ 0.62
SPDEF-202ENST00000544425 ISY1Q9ULR0 285 aaKnown RBP18.9■□□□□ 0.62
SPDEF-202ENST00000544425 GIMAP6Q6P9H5 292 aa18.89■□□□□ 0.61
SPDEF-202ENST00000544425 ZNF384Q8TF68 577 aa18.89■□□□□ 0.61
SPDEF-202ENST00000544425 TMEM87BQ96K49 555 aa18.89■□□□□ 0.61
SPDEF-202ENST00000544425 KIF3AQ9Y496 699 aa18.89■□□□□ 0.61
SPDEF-202ENST00000544425 MYO5AQ9Y4I1 1855 aaKnown RBP18.89■□□□□ 0.61
SPDEF-202ENST00000544425 VPS37CA5D8V6 355 aaPredicted RBP18.88■□□□□ 0.61
SPDEF-202ENST00000544425 JAK2O60674 1132 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 MBD3O95983 291 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 TDO2P48775 406 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 GPSM2P81274 684 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 AKNAD1Q5T1N1 836 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 WDR66Q8TBY9 1149 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 STAG1Q8WVM7 1258 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 ANAPC4Q9UJX5 808 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 EP400Q96L91 3159 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 FSD2A1L4K1 749 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 CTDNEP1O95476 244 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 MECOMQ03112 1051 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 ZNF804AQ7Z570 1209 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 MTA3Q9BTC8 594 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 KRT23Q9C075 422 aa18.88■□□□□ 0.61
SPDEF-202ENST00000544425 ANGEL1Q9UNK9 670 aaKnown RBP18.88■□□□□ 0.61
SPDEF-202ENST00000544425 LAMA4Q16363 1823 aa18.87■□□□□ 0.61
SPDEF-202ENST00000544425 DHX16O60231 1041 aaKnown RBP18.87■□□□□ 0.61
SPDEF-202ENST00000544425 CYB5R4Q7L1T6 521 aa18.87■□□□□ 0.61
SPDEF-202ENST00000544425 GPT2Q8TD30 523 aa18.87■□□□□ 0.61
SPDEF-202ENST00000544425 GPHNQ9NQX3 736 aaPredicted RBP18.87■□□□□ 0.61
SPDEF-202ENST00000544425 NSFL1CQ9UNZ2 370 aaKnown RBP18.87■□□□□ 0.61
SPDEF-202ENST00000544425 DTNBO60941 627 aa18.86■□□□□ 0.61
SPDEF-202ENST00000544425 CCT2P78371 535 aaKnown RBP18.86■□□□□ 0.61
SPDEF-202ENST00000544425 MFSD6Q6ZSS7 791 aa18.86■□□□□ 0.61
SPDEF-202ENST00000544425 USP48Q86UV5 1035 aa18.86■□□□□ 0.61
SPDEF-202ENST00000544425 FAM184AQ8NB25 1140 aa18.86■□□□□ 0.61
SPDEF-202ENST00000544425 RNF41Q9H4P4 317 aaPredicted RBP18.86■□□□□ 0.61
SPDEF-202ENST00000544425 GGA1Q9UJY5 639 aa18.86■□□□□ 0.61
SPDEF-202ENST00000544425 BRPF3Q9ULD4 1205 aa18.86■□□□□ 0.61
SPDEF-202ENST00000544425 KLF18A0A0U1RQI7 1052 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms