RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 PLCB2Q00722 1185 aa17.62■□□□□ 0.41
CHFR-223ENST00000544268 SF3B3Q15393 1217 aaKnown RBP17.62■□□□□ 0.41
CHFR-223ENST00000544268 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
CHFR-223ENST00000544268 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
CHFR-223ENST00000544268 MPHOSPH8Q99549 860 aa17.62■□□□□ 0.41
CHFR-223ENST00000544268 FEZ1Q99689 392 aa17.62■□□□□ 0.41
CHFR-223ENST00000544268 CASZ1Q86V15 1759 aa17.62■□□□□ 0.41
CHFR-223ENST00000544268 PDE8BO95263 885 aa17.61■□□□□ 0.41
CHFR-223ENST00000544268 GYS1P13807 737 aa17.61■□□□□ 0.41
CHFR-223ENST00000544268 UVSSAQ2YD98 709 aa17.61■□□□□ 0.41
CHFR-223ENST00000544268 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
CHFR-223ENST00000544268 ZNF827Q17R98 1081 aa17.61■□□□□ 0.41
CHFR-223ENST00000544268 ANKRD7Q92527 254 aa17.61■□□□□ 0.41
CHFR-223ENST00000544268 NEK1Q96PY6 1258 aa17.61■□□□□ 0.41
CHFR-223ENST00000544268 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
CHFR-223ENST00000544268 TAF1P21675 1872 aa17.6■□□□□ 0.41
CHFR-223ENST00000544268 IGHMBP2P38935 993 aaKnown RBP17.6■□□□□ 0.41
CHFR-223ENST00000544268 MCMDC2Q4G0Z9 681 aa17.6■□□□□ 0.41
CHFR-223ENST00000544268 GORABQ5T7V8 394 aa17.6■□□□□ 0.41
CHFR-223ENST00000544268 C17orf53Q8N3J3 647 aaPredicted RBP17.6■□□□□ 0.41
CHFR-223ENST00000544268 BRF1Q92994 677 aa17.6■□□□□ 0.41
CHFR-223ENST00000544268 MROH5Q6ZUA9 1318 aa17.6■□□□□ 0.41
CHFR-223ENST00000544268 CARMIL3Q8ND23 1372 aa17.6■□□□□ 0.41
CHFR-223ENST00000544268 TTLL5Q6EMB2 1281 aa17.6■□□□□ 0.41
CHFR-223ENST00000544268 FUCA2Q9BTY2 467 aa17.6■□□□□ 0.41
CHFR-223ENST00000544268 TNS1Q9HBL0 1735 aaKnown RBP17.59■□□□□ 0.41
CHFR-223ENST00000544268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.59■□□□□ 0.41
CHFR-223ENST00000544268 FAM184AQ8NB25 1140 aa17.59■□□□□ 0.41
CHFR-223ENST00000544268 ATP6V1DQ9Y5K8 247 aa17.59■□□□□ 0.41
CHFR-223ENST00000544268 IFIT1P09914 478 aaKnown RBP17.59■□□□□ 0.41
CHFR-223ENST00000544268 CCDC158Q5M9N0 1113 aa17.59■□□□□ 0.41
CHFR-223ENST00000544268 PI16Q6UXB8 463 aa17.59■□□□□ 0.41
CHFR-223ENST00000544268 KBTBD3Q8NAB2 608 aa17.59■□□□□ 0.41
CHFR-223ENST00000544268 NLRP3Q96P20 1036 aa17.59■□□□□ 0.41
CHFR-223ENST00000544268 CDC5LQ99459 802 aaKnown RBP17.59■□□□□ 0.41
CHFR-223ENST00000544268 FTOQ9C0B1 505 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHFR-223ENST00000544268 PAG1Q9NWQ8 432 aa17.59■□□□□ 0.41
CHFR-223ENST00000544268 TFCP2L1Q9NZI6 479 aa17.59■□□□□ 0.41
CHFR-223ENST00000544268 BCCIPQ9P287 314 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHFR-223ENST00000544268 SNAP23O00161 211 aa17.58■□□□□ 0.41
CHFR-223ENST00000544268 NPHP1O15259 732 aa17.58■□□□□ 0.41
CHFR-223ENST00000544268 CEBPZQ03701 1054 aaKnown RBP17.58■□□□□ 0.41
CHFR-223ENST00000544268 SCRN1Q12765 414 aa17.58■□□□□ 0.41
CHFR-223ENST00000544268 GPHNQ9NQX3 736 aaPredicted RBP17.58■□□□□ 0.41
CHFR-223ENST00000544268 ADCY5O95622 1261 aa17.58■□□□□ 0.4
CHFR-223ENST00000544268 PUM3Q15397 648 aaKnown RBP17.58■□□□□ 0.4
CHFR-223ENST00000544268 TTC39AQ5SRH9 613 aa17.58■□□□□ 0.4
CHFR-223ENST00000544268 CKAP2LQ8IYA6 745 aa17.58■□□□□ 0.4
CHFR-223ENST00000544268 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
CHFR-223ENST00000544268 NCOA5Q9HCD5 579 aaKnown RBP17.58■□□□□ 0.4
CHFR-223ENST00000544268 OGFRQ9NZT2 677 aa17.58■□□□□ 0.4
CHFR-223ENST00000544268 FGFR2P21802 821 aa17.57■□□□□ 0.4
CHFR-223ENST00000544268 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.44e-10■■■■■ 46.9
CHFR-223ENST00000544268 CCT2P78371 535 aaKnown RBP17.57■□□□□ 0.4
CHFR-223ENST00000544268 APOBRQ0VD83 1088 aa17.57■□□□□ 0.4
CHFR-223ENST00000544268 SCARF1Q14162 830 aa17.57■□□□□ 0.4
CHFR-223ENST00000544268 TSGA10IPQ3SY00 556 aa17.57■□□□□ 0.4
CHFR-223ENST00000544268 ZNF771Q7L3S4 317 aaPredicted RBP17.57■□□□□ 0.4
CHFR-223ENST00000544268 GTF3C6Q969F1 213 aa17.57■□□□□ 0.4
CHFR-223ENST00000544268 TTC12Q9H892 705 aaPredicted RBP17.57■□□□□ 0.4
CHFR-223ENST00000544268 CGNQ9P2M7 1197 aaKnown RBP17.57■□□□□ 0.4
CHFR-223ENST00000544268 FKBP4Q02790 459 aaKnown RBP eCLIP17.57■□□□□ 0.4
CHFR-223ENST00000544268 ANKRD18AQ8IVF6 992 aa17.57■□□□□ 0.4
CHFR-223ENST00000544268 CELF1Q92879 486 aaKnown RBP17.57■□□□□ 0.4
CHFR-223ENST00000544268 HMG20BQ9P0W2 317 aa17.57■□□□□ 0.4
CHFR-223ENST00000544268 M0R2C6 588 aa17.56■□□□□ 0.4
CHFR-223ENST00000544268 CNBD1Q8NA66 436 aa17.56■□□□□ 0.4
CHFR-223ENST00000544268 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.56■□□□□ 0.4
CHFR-223ENST00000544268 CTIFO43310 598 aaKnown RBP17.56■□□□□ 0.4
CHFR-223ENST00000544268 HMGB2P26583 209 aaKnown RBP17.56■□□□□ 0.4
CHFR-223ENST00000544268 KRT85P78386 507 aa17.56■□□□□ 0.4
CHFR-223ENST00000544268 GABPB1Q06547 395 aaPredicted RBP17.56■□□□□ 0.4
CHFR-223ENST00000544268 CHRNDQ07001 517 aa17.56■□□□□ 0.4
CHFR-223ENST00000544268 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
CHFR-223ENST00000544268 LPIN2Q92539 896 aa17.56■□□□□ 0.4
CHFR-223ENST00000544268 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
CHFR-223ENST00000544268 TM4SF1P30408 202 aa17.55■□□□□ 0.4
CHFR-223ENST00000544268 CHAF1AQ13111 956 aaPredicted RBP17.55■□□□□ 0.4
CHFR-223ENST00000544268 ANKRD1Q15327 319 aa17.55■□□□□ 0.4
CHFR-223ENST00000544268 DACT1Q9NYF0 836 aa17.55■□□□□ 0.4
CHFR-223ENST00000544268 MAST3O60307 1309 aa17.55■□□□□ 0.4
CHFR-223ENST00000544268 IGSF3O75054 1194 aa17.55■□□□□ 0.4
CHFR-223ENST00000544268 CTDNEP1O95476 244 aa17.55■□□□□ 0.4
CHFR-223ENST00000544268 HAND2P61296 217 aa17.55■□□□□ 0.4
CHFR-223ENST00000544268 PRR5LQ6MZQ0 368 aa17.55■□□□□ 0.4
CHFR-223ENST00000544268 PGBD1Q96JS3 809 aa17.55■□□□□ 0.4
CHFR-223ENST00000544268 HSPD1P10809 573 aaKnown RBP17.54■□□□□ 0.4
CHFR-223ENST00000544268 GUCY1B3Q02153 619 aa17.54■□□□□ 0.4
CHFR-223ENST00000544268 COL23A1Q86Y22 540 aaPredicted RBP17.54■□□□□ 0.4
CHFR-223ENST00000544268 RAB11FIP4Q86YS3 637 aa17.54■□□□□ 0.4
CHFR-223ENST00000544268 OSBP2Q969R2 916 aa17.54■□□□□ 0.4
CHFR-223ENST00000544268 BSDC1Q9NW68 430 aaPredicted RBP17.54■□□□□ 0.4
CHFR-223ENST00000544268 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
CHFR-223ENST00000544268 PHKA1P46020 1223 aa17.53■□□□□ 0.4
CHFR-223ENST00000544268 LEO1Q8WVC0 666 aaPredicted RBP17.53■□□□□ 0.4
CHFR-223ENST00000544268 SPATA32Q96LK8 384 aa17.53■□□□□ 0.4
CHFR-223ENST00000544268 RIOK3O14730 519 aaKnown RBP17.53■□□□□ 0.4
CHFR-223ENST00000544268 SERPINB2P05120 415 aa17.53■□□□□ 0.4
CHFR-223ENST00000544268 SLC5A1P13866 664 aa17.53■□□□□ 0.4
CHFR-223ENST00000544268 MCAMP43121 646 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms