RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ADH6P28332 368 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 CDC25BP30305 580 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 PCDH1Q08174 1060 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 RPS26P11Q5JNZ5 115 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-207ENST00000544052 SNAP47Q5SQN1 464 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 BNC2Q6ZN30 1099 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-207ENST00000544052 NUDT8Q8WV74 236 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 MDFIQ99750 246 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 KCNQ5Q9NR82 932 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 GGA1Q9UJY5 639 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 SUPT16HQ9Y5B9 1047 aaKnown RBP5.67□□□□□ -1.5
SCFD1-207ENST00000544052 MRVI1Q9Y6F6 885 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 ABCC9O60706 1549 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 ARAFP10398 606 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 EPHA1P21709 976 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 LMNB2Q03252 620 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 RBL2Q08999 1139 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 GIMAP6Q6P9H5 292 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 FAM177A1Q8N128 213 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-207ENST00000544052 FBXO27Q8NI29 283 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 NT5C1AQ9BXI3 368 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 AVENQ9NQS1 362 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-207ENST00000544052 ADARB2-AS1A8MUL3 147 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 B3GALT4O96024 378 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 BCRP11274 1271 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 PTPRAP18433 802 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 APOBRQ0VD83 1088 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 CCDC144BQ3MJ40 725 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 HGSNATQ68CP4 663 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 MPRIPQ6WCQ1 1025 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 TRIM42Q8IWZ5 723 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 GRIN3AQ8TCU5 1115 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 JARID2Q92833 1246 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-207ENST00000544052 ARMC5Q96C12 935 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 ADAM19Q9H013 955 aa5.66□□□□□ -1.5
SCFD1-207ENST00000544052 TLR3O15455 904 aaKnown RBP5.65□□□□□ -1.5
SCFD1-207ENST00000544052 STK10O94804 968 aaKnown RBP5.65□□□□□ -1.5
SCFD1-207ENST00000544052 F13A1P00488 732 aa5.65□□□□□ -1.5
SCFD1-207ENST00000544052 SSBP05455 408 aaKnown RBP eCLIP5.65□□□□□ -1.5
SCFD1-207ENST00000544052 ESRRAP11474 423 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-207ENST00000544052 PPP2R3AQ06190 1150 aa5.65□□□□□ -1.5
SCFD1-207ENST00000544052 SEPT6Q14141 434 aa5.65□□□□□ -1.5
SCFD1-207ENST00000544052 SEC16BQ96JE7 1060 aa5.65□□□□□ -1.5
SCFD1-207ENST00000544052 ZNF408Q9H9D4 720 aa5.65□□□□□ -1.5
SCFD1-207ENST00000544052 NSFL1CQ9UNZ2 370 aaKnown RBP5.65□□□□□ -1.5
SCFD1-207ENST00000544052 ELOA3CA0A087WX78 387 aaPredicted RBP5.65□□□□□ -1.51
SCFD1-207ENST00000544052 ELOA3DA6NLF2 546 aaPredicted RBP5.65□□□□□ -1.51
SCFD1-207ENST00000544052 ETFBP38117 255 aa5.65□□□□□ -1.51
SCFD1-207ENST00000544052 RPS26P62854 115 aaKnown RBP5.65□□□□□ -1.51
SCFD1-207ENST00000544052 ELOA3BQ3SY89 546 aa5.65□□□□□ -1.51
SCFD1-207ENST00000544052 TXNDC11Q6PKC3 985 aa5.65□□□□□ -1.51
SCFD1-207ENST00000544052 FAM196AQ6ZSG2 479 aa5.65□□□□□ -1.51
SCFD1-207ENST00000544052 PODNQ7Z5L7 613 aa5.65□□□□□ -1.51
SCFD1-207ENST00000544052 ELOA3Q8NG57 546 aa5.65□□□□□ -1.51
SCFD1-207ENST00000544052 NEDD1Q8NHV4 660 aa5.65□□□□□ -1.51
SCFD1-207ENST00000544052 CBX8Q9HC52 389 aa5.65□□□□□ -1.51
SCFD1-207ENST00000544052 SOX1O00570 391 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-207ENST00000544052 SOX9P48436 509 aa5.64□□□□□ -1.51
SCFD1-207ENST00000544052 IKBKEQ14164 716 aa5.64□□□□□ -1.51
SCFD1-207ENST00000544052 SEZ6Q53EL9 994 aa5.64□□□□□ -1.51
SCFD1-207ENST00000544052 CCDC81Q6ZN84 652 aa5.64□□□□□ -1.51
SCFD1-207ENST00000544052 SULF2Q8IWU5 870 aa5.64□□□□□ -1.51
SCFD1-207ENST00000544052 BEND7Q8N7W2 519 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-207ENST00000544052 MIR1-1HGQ9H1L0 117 aa5.64□□□□□ -1.51
SCFD1-207ENST00000544052 LRRC4BQ9NT99 713 aa5.64□□□□□ -1.51
SCFD1-207ENST00000544052 FRRS1LQ9P0K9 344 aa5.64□□□□□ -1.51
SCFD1-207ENST00000544052 CNTNAP5Q8WYK1 1306 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 RGS9O75916 674 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-207ENST00000544052 NME2P22392 152 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 PTPN11Q06124 597 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-207ENST00000544052 GRIK5Q16478 980 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 C1orf229Q6ZS94 237 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-207ENST00000544052 GATAD2BQ8WXI9 593 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 SLC7A3Q8WY07 619 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 NKD1Q969G9 470 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 ACDQ96AP0 544 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 SPATA32Q96LK8 384 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 HIRIP3Q9BW71 556 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-207ENST00000544052 PIF1Q9H611 641 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 PPT2Q9UMR5 302 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 STARD13Q9Y3M8 1113 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 FAM221AA4D161 298 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 LMNB1P20700 586 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 CDC27P30260 824 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 MAP2K3P46734 347 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 C8orf86Q6ZUL3 223 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 ZC3H12CQ9C0D7 883 aaKnown RBP5.63□□□□□ -1.51
SCFD1-207ENST00000544052 ZSWIM4Q9H7M6 989 aa5.63□□□□□ -1.51
SCFD1-207ENST00000544052 JPH1Q9HDC5 661 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-207ENST00000544052 ECEL1O95672 775 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 ALBP02768 609 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 MAP1SQ66K74 1059 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-207ENST00000544052 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-207ENST00000544052 IL22RA1Q8N6P7 574 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 CYP8B1Q9UNU6 501 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 ALAS2P22557 587 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 ARNTP27540 789 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 MCM4P33991 863 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 BAG6P46379 1132 aa5.62□□□□□ -1.51
SCFD1-207ENST00000544052 ZNF252P-AS1Q0IIN9 211 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms