RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 SAMM50Q9Y512 469 aa9.8□□□□□ -0.84
SMCO2-206ENST00000543991 ERCC6L2Q5T890 1561 aa9.8□□□□□ -0.84
SMCO2-206ENST00000543991 ELOA3CA0A087WX78 387 aaPredicted RBP9.79□□□□□ -0.84
SMCO2-206ENST00000543991 ELOA3DA6NLF2 546 aaPredicted RBP9.79□□□□□ -0.84
SMCO2-206ENST00000543991 FAM177BA6PVY3 158 aa9.79□□□□□ -0.84
SMCO2-206ENST00000543991 GREM1O60565 184 aa9.79□□□□□ -0.84
SMCO2-206ENST00000543991 TFE3P19532 575 aaPredicted RBP9.79□□□□□ -0.84
SMCO2-206ENST00000543991 GARTP22102 1010 aa9.79□□□□□ -0.84
SMCO2-206ENST00000543991 ZNF157P51786 506 aaPredicted RBP9.79□□□□□ -0.84
SMCO2-206ENST00000543991 FAM160A1Q05DH4 1040 aa9.79□□□□□ -0.84
SMCO2-206ENST00000543991 ZNF423Q2M1K9 1284 aa9.79□□□□□ -0.84
SMCO2-206ENST00000543991 ELOA3BQ3SY89 546 aa9.79□□□□□ -0.84
SMCO2-206ENST00000543991 PCNX4Q63HM2 1172 aa9.79□□□□□ -0.84
SMCO2-206ENST00000543991 ADAMTSL4Q6UY14 1074 aa9.79□□□□□ -0.84
SMCO2-206ENST00000543991 GPR161Q8N6U8 529 aaKnown RBP9.79□□□□□ -0.84
SMCO2-206ENST00000543991 ELOA3Q8NG57 546 aa9.79□□□□□ -0.84
SMCO2-206ENST00000543991 DNAJC2Q99543 621 aaKnown RBP9.79□□□□□ -0.84
SMCO2-206ENST00000543991 RBL2Q08999 1139 aa9.78□□□□□ -0.84
SMCO2-206ENST00000543991 SNAP47Q5SQN1 464 aa9.78□□□□□ -0.84
SMCO2-206ENST00000543991 PSAPL1Q6NUJ1 521 aa9.78□□□□□ -0.84
SMCO2-206ENST00000543991 CACTIN-AS1Q8N1I8 211 aa9.78□□□□□ -0.84
SMCO2-206ENST00000543991 LACRTQ9GZZ8 138 aa9.78□□□□□ -0.84
SMCO2-206ENST00000543991 GGA1Q9UJY5 639 aa9.78□□□□□ -0.84
SMCO2-206ENST00000543991 WIZO95785 1651 aa9.77□□□□□ -0.84
SMCO2-206ENST00000543991 H3BM21 787 aa9.77□□□□□ -0.85
SMCO2-206ENST00000543991 NME2P22392 152 aa9.77□□□□□ -0.85
SMCO2-206ENST00000543991 ALAS2P22557 587 aa9.77□□□□□ -0.85
SMCO2-206ENST00000543991 DPH6Q7L8W6 267 aa9.77□□□□□ -0.85
SMCO2-206ENST00000543991 GOLM1Q8NBJ4 401 aa9.77□□□□□ -0.85
SMCO2-206ENST00000543991 HIRIP3Q9BW71 556 aaPredicted RBP9.77□□□□□ -0.85
SMCO2-206ENST00000543991 TARBP1Q13395 1621 aaKnown RBP9.77□□□□□ -0.85
SMCO2-206ENST00000543991 IGF1RP08069 1367 aa9.76□□□□□ -0.85
SMCO2-206ENST00000543991 RGS9O75916 674 aaPredicted RBP9.76□□□□□ -0.85
SMCO2-206ENST00000543991 ESRRAP11474 423 aaPredicted RBP9.76□□□□□ -0.85
SMCO2-206ENST00000543991 LMNB1P20700 586 aa9.76□□□□□ -0.85
SMCO2-206ENST00000543991 BMP6P22004 513 aa9.76□□□□□ -0.85
SMCO2-206ENST00000543991 CDC27P30260 824 aa9.76□□□□□ -0.85
SMCO2-206ENST00000543991 COL9A2Q14055 689 aaPredicted RBP9.76□□□□□ -0.85
SMCO2-206ENST00000543991 CCDC84Q86UT8 332 aaPredicted RBP9.76□□□□□ -0.85
SMCO2-206ENST00000543991 TRIM42Q8IWZ5 723 aa9.76□□□□□ -0.85
SMCO2-206ENST00000543991 GOLGA6L1Q8N7Z2 621 aa9.76□□□□□ -0.85
SMCO2-206ENST00000543991 SH2B1Q9NRF2 756 aaPredicted RBP9.76□□□□□ -0.85
SMCO2-206ENST00000543991 CYP8B1Q9UNU6 501 aa9.76□□□□□ -0.85
SMCO2-206ENST00000543991 EFR3BQ9Y2G0 817 aa9.76□□□□□ -0.85
SMCO2-206ENST00000543991 LMTK3Q96Q04 1460 aa9.76□□□□□ -0.85
SMCO2-206ENST00000543991 SNAPC4Q5SXM2 1469 aa9.75□□□□□ -0.85
SMCO2-206ENST00000543991 STK10O94804 968 aaKnown RBP9.75□□□□□ -0.85
SMCO2-206ENST00000543991 VSIG8P0DPA2 414 aa9.75□□□□□ -0.85
SMCO2-206ENST00000543991 CABP4P57796 275 aa9.75□□□□□ -0.85
SMCO2-206ENST00000543991 IKBKEQ14164 716 aa9.75□□□□□ -0.85
SMCO2-206ENST00000543991 SOGA3Q5TF21 947 aa9.75□□□□□ -0.85
SMCO2-206ENST00000543991 GDF6Q6KF10 455 aaPredicted RBP9.75□□□□□ -0.85
SMCO2-206ENST00000543991 FAM196AQ6ZSG2 479 aa9.75□□□□□ -0.85
SMCO2-206ENST00000543991 DDX54Q8TDD1 881 aaKnown RBP9.75□□□□□ -0.85
SMCO2-206ENST00000543991 GINM1Q9NU53 330 aa9.75□□□□□ -0.85
SMCO2-206ENST00000543991 GDF2Q9UK05 429 aaPredicted RBP9.75□□□□□ -0.85
SMCO2-206ENST00000543991 ROBO2Q9HCK4 1378 aa9.75□□□□□ -0.85
SMCO2-206ENST00000543991 MAGI1Q96QZ7 1491 aaPredicted RBP9.74□□□□□ -0.85
SMCO2-206ENST00000543991 SOX9P48436 509 aa9.74□□□□□ -0.85
SMCO2-206ENST00000543991 NASPP49321 788 aaPredicted RBP9.74□□□□□ -0.85
SMCO2-206ENST00000543991 LRRC14Q15048 493 aa9.74□□□□□ -0.85
SMCO2-206ENST00000543991 SLCO4C1Q6ZQN7 724 aa9.74□□□□□ -0.85
SMCO2-206ENST00000543991 SULF2Q8IWU5 870 aa9.74□□□□□ -0.85
SMCO2-206ENST00000543991 COL25A1Q9BXS0 654 aaPredicted RBP9.74□□□□□ -0.85
SMCO2-206ENST00000543991 LNPKQ9C0E8 428 aa9.74□□□□□ -0.85
SMCO2-206ENST00000543991 UBP1Q9NZI7 540 aa9.74□□□□□ -0.85
SMCO2-206ENST00000543991 DNMBPQ6XZF7 1577 aa9.74□□□□□ -0.85
SMCO2-206ENST00000543991 SSBP05455 408 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMCO2-206ENST00000543991 ARNTP27540 789 aa9.73□□□□□ -0.85
SMCO2-206ENST00000543991 APOBRQ0VD83 1088 aa9.73□□□□□ -0.85
SMCO2-206ENST00000543991 RASIP1Q5U651 963 aa9.73□□□□□ -0.85
SMCO2-206ENST00000543991 NKD1Q969G9 470 aa9.73□□□□□ -0.85
SMCO2-206ENST00000543991 EMILIN2Q9BXX0 1053 aa9.73□□□□□ -0.85
SMCO2-206ENST00000543991 MIR1-1HGQ9H1L0 117 aa9.73□□□□□ -0.85
SMCO2-206ENST00000543991 STRIP2Q9ULQ0 834 aa9.73□□□□□ -0.85
SMCO2-206ENST00000543991 PCDHB5Q9Y5E4 795 aa9.73□□□□□ -0.85
SMCO2-206ENST00000543991 TDRD9Q8NDG6 1382 aaKnown RBP9.73□□□□□ -0.85
SMCO2-206ENST00000543991 H3BRJ5 948 aa9.72□□□□□ -0.85
SMCO2-206ENST00000543991 EPHA1P21709 976 aa9.72□□□□□ -0.85
SMCO2-206ENST00000543991 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
SMCO2-206ENST00000543991 BNC2Q6ZN30 1099 aaPredicted RBP9.72□□□□□ -0.85
SMCO2-206ENST00000543991 SLITRK4Q8IW52 837 aa9.72□□□□□ -0.85
SMCO2-206ENST00000543991 NUDT8Q8WV74 236 aa9.72□□□□□ -0.85
SMCO2-206ENST00000543991 STARD13Q9Y3M8 1113 aa9.72□□□□□ -0.85
SMCO2-206ENST00000543991 HECW2Q9P2P5 1572 aa9.71□□□□□ -0.85
SMCO2-206ENST00000543991 PRDM2Q13029 1718 aa9.71□□□□□ -0.85
SMCO2-206ENST00000543991 SOX1O00570 391 aaPredicted RBP9.71□□□□□ -0.86
SMCO2-206ENST00000543991 F13A1P00488 732 aa9.71□□□□□ -0.86
SMCO2-206ENST00000543991 EPXP11678 715 aa9.71□□□□□ -0.86
SMCO2-206ENST00000543991 CRKP46108 304 aa9.71□□□□□ -0.86
SMCO2-206ENST00000543991 SRSF11Q05519 484 aaKnown RBP9.71□□□□□ -0.86
SMCO2-206ENST00000543991 NFX1Q12986 1120 aaKnown RBP9.71□□□□□ -0.86
SMCO2-206ENST00000543991 GRIK5Q16478 980 aa9.71□□□□□ -0.86
SMCO2-206ENST00000543991 DIEXFQ68CQ4 756 aaKnown RBP9.71□□□□□ -0.86
SMCO2-206ENST00000543991 SCARA3Q6AZY7 606 aa9.71□□□□□ -0.86
SMCO2-206ENST00000543991 LLGL2Q6P1M3 1020 aa9.71□□□□□ -0.86
SMCO2-206ENST00000543991 C20orf204Q6ZNR8 217 aa9.71□□□□□ -0.86
SMCO2-206ENST00000543991 STK35Q8TDR2 534 aa9.71□□□□□ -0.86
SMCO2-206ENST00000543991 GATAD2BQ8WXI9 593 aa9.71□□□□□ -0.86
SMCO2-206ENST00000543991 LRRC3Q9BY71 257 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms