RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 SPECC1LQ69YQ0 1117 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 PACS2Q86VP3 889 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 SPATS2Q86XZ4 545 aaKnown RBP5.72□□□□□ -1.49
LMO3-229ENST00000543721 CERS3Q8IU89 383 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 AFAP1L1Q8TED9 768 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 CCDC102AQ96A19 550 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 PANX2Q96RD6 677 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 TSPOAP1O95153 1857 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 A0A0D9SFI3 127 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 A0A1B0GVL5 298 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 CTAGE15A4D2H0 777 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 CTAGE8P0CG41 777 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 TTLL5Q6EMB2 1281 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 CTAGE6Q86UF2 777 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 ARHGEF25Q86VW2 580 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 CTAGE4Q8IX94 777 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 FBXL16Q8N461 479 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 ANKRD20A12PQ8NF67 263 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 KIFC2Q96AC6 838 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 CCDC51Q96ER9 411 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 DRC1Q96MC2 740 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 TCEANC2Q96MN5 208 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 AGXT2Q9BYV1 514 aa5.72□□□□□ -1.49
LMO3-229ENST00000543721 TECPR2O15040 1411 aa5.71□□□□□ -1.49
LMO3-229ENST00000543721 NALCNQ8IZF0 1738 aa5.71□□□□□ -1.49
LMO3-229ENST00000543721 CTAGE9A4FU28 777 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 CCDC172P0C7W6 258 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 CALRP27797 417 aaKnown RBP5.71□□□□□ -1.5
LMO3-229ENST00000543721 GSCP56915 257 aaPredicted RBP5.71□□□□□ -1.5
LMO3-229ENST00000543721 TRDNQ13061 729 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 MCMDC2Q4G0Z9 681 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 WDR93Q6P2C0 686 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 DHX58Q96C10 678 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 RPGRIP1Q96KN7 1286 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 C19orf44Q9H6X5 657 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 TTF2Q9UNY4 1162 aaKnown RBP5.71□□□□□ -1.5
LMO3-229ENST00000543721 FAN1Q9Y2M0 1017 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 RIMBP3CA6NJZ7 1639 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 RIMBP3BA6NNM3 1639 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 RIMBP3Q9UFD9 1639 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 EBAG9O00559 213 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 WDHD1O75717 1129 aaPredicted RBP5.71□□□□□ -1.5
LMO3-229ENST00000543721 ATP5JP18859 108 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 SYKP43405 635 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 AARSP49588 968 aaKnown RBP eCLIP5.71□□□□□ -1.5
LMO3-229ENST00000543721 CASP8Q14790 479 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 KIF4BQ2VIQ3 1234 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 LRRC31Q6UY01 552 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 GBP6Q6ZN66 633 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 FAM177A1Q8N128 213 aaPredicted RBP5.71□□□□□ -1.5
LMO3-229ENST00000543721 CNNM3Q8NE01 707 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 CCDC148Q8NFR7 591 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 SYTL4Q96C24 671 aaPredicted RBP5.71□□□□□ -1.5
LMO3-229ENST00000543721 C8orf76Q96K31 380 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 WDR24Q96S15 920 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 DONSONQ9NYP3 566 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 CEP83Q9Y592 693 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 SALL1Q9NSC2 1324 aa5.71□□□□□ -1.5
LMO3-229ENST00000543721 LOC102724159A0A0B4J2E5 919 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 FAM237AA0A1B0GTK4 181 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 PI4KAP2A4QPH2 592 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 FOXO3O43524 673 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 PPP6R2O75170 966 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 ERLIN2O94905 339 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 DDX58O95786 925 aaKnown RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 MAP2K2P36507 400 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 AMPHP49418 695 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 GYS2P54840 703 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 PWP2Q15269 919 aaKnown RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 ANO1Q5XXA6 986 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 PPFIBP1Q86W92 1011 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 TMEM139Q8IV31 216 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 NUTM2AQ8IVF1 878 aaPredicted RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 PDILTQ8N807 584 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 PI4KAP1Q8N8J0 262 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 TRIML1Q8N9V2 468 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 MLKLQ8NB16 471 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 NECTIN2Q92692 538 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 FBXW7Q969H0 707 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 DSCC1Q9BVC3 393 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 DBF4Q9UBU7 674 aaPredicted RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 DIP2CQ9Y2E4 1556 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 MAP3K15Q6ZN16 1313 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 SHTN1A0MZ66 631 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 AKR1B15C9JRZ8 316 aaPredicted RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 PSEN1P49768 467 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 MYSM1Q5VVJ2 828 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 CCDC102BQ68D86 513 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 MICALL1Q8N3F8 863 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 STAG1Q8WVM7 1258 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 SMARCC1Q92922 1105 aaPredicted RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 BOLA2Q9H3K6 86 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 PHAXQ9H814 394 aaKnown RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 ABCB6Q9NP58 842 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 A1CFQ9NQ94 594 aaKnown RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 HELLSQ9NRZ9 838 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 ATXN2Q99700 1313 aaKnown RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 PTPRUQ92729 1446 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 FMN2Q9NZ56 1722 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 BIN1O00499 593 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms