RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.41
CALU-206ENST00000542996 SLC35G1Q2M3R5 365 aa12.52□□□□□ -0.41
CALU-206ENST00000542996 VSIG10Q8N0Z9 540 aa12.52□□□□□ -0.41
CALU-206ENST00000542996 COL5A3P25940 1745 aaPredicted RBP12.52□□□□□ -0.41
CALU-206ENST00000542996 ZCRB1Q8TBF4 217 aaKnown RBP12.52□□□□□ -0.41
CALU-206ENST00000542996 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 U2AF2P26368 475 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■■■□□ 16.3
CALU-206ENST00000542996 GRAMD1CQ8IYS0 662 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 FAM200AQ8TCP9 573 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 MYH8P13535 1937 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
CALU-206ENST00000542996 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
CALU-206ENST00000542996 NYAP1Q6ZVC0 841 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 TIAM2Q8IVF5 1701 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
CALU-206ENST00000542996 PLCB2Q00722 1185 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 HSP90AB4PQ58FF6 505 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 STRN4Q9NRL3 753 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 CYP2D7A0A087X1C5 515 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 DPYDQ12882 1025 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 ITPK1Q13572 414 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 STK11IPQ8N1F8 1099 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 FBXL16Q8N461 479 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 CCDC39Q9UFE4 941 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 TBC1D2BQ9UPU7 963 aa12.51□□□□□ -0.41
CALU-206ENST00000542996 COBLO75128 1261 aa12.5□□□□□ -0.41
CALU-206ENST00000542996 MSNP26038 577 aaKnown RBP12.5□□□□□ -0.41
CALU-206ENST00000542996 APTXQ7Z2E3 356 aaKnown RBP12.5□□□□□ -0.41
CALU-206ENST00000542996 C16orf45Q96MC5 204 aaPredicted RBP12.5□□□□□ -0.41
CALU-206ENST00000542996 DLEC1Q9Y238 1755 aa12.5□□□□□ -0.41
CALU-206ENST00000542996 KCNQ2O43526 872 aa12.5□□□□□ -0.41
CALU-206ENST00000542996 DSCC1Q9BVC3 393 aa12.5□□□□□ -0.41
CALU-206ENST00000542996 NRAPQ86VF7 1730 aa12.5□□□□□ -0.41
CALU-206ENST00000542996 RNF113AO15541 343 aaKnown RBP12.49□□□□□ -0.41
CALU-206ENST00000542996 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 METTL16Q86W50 562 aaKnown RBP12.49□□□□□ -0.41
CALU-206ENST00000542996 LRRC8AQ8IWT6 810 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 ZBTB9Q96C00 473 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 CWC25Q9NXE8 425 aaPredicted RBP12.49□□□□□ -0.41
CALU-206ENST00000542996 DCCP43146 1447 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 hCG_1642624A0A1W2PR95 340 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 BIN1O00499 593 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 GPAA1O43292 621 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 CCAR1Q8IX12 1150 aaKnown RBP12.49□□□□□ -0.41
CALU-206ENST00000542996 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
CALU-206ENST00000542996 MTRQ99707 1265 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 ZKSCAN3Q9BRR0 538 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 NUP62CLQ9H1M0 184 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 PDCL3Q9H2J4 239 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 MARCKSP29966 332 aaPredicted RBP12.49□□□□□ -0.41
CALU-206ENST00000542996 TERF1P54274 439 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 UVSSAQ2YD98 709 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 HSP90AA4PQ58FG1 418 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 SASS6Q6UVJ0 657 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 TNRC6CQ9HCJ0 1690 aaKnown RBP12.49□□□□□ -0.41
CALU-206ENST00000542996 KIAA1551Q9HCM1 1747 aa12.49□□□□□ -0.41
CALU-206ENST00000542996 PTMSP20962 102 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 ZNF165P49910 485 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 RASGRF1Q13972 1273 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 LY9Q9HBG7 655 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 HMG20BQ9P0W2 317 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 ZSWIM5Q9P217 1185 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 HPSEQ9Y251 543 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 KIF23Q02241 960 aaPredicted RBP12.48□□□□□ -0.41
CALU-206ENST00000542996 FMR1Q06787 632 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■□□□□ 8.6
CALU-206ENST00000542996 MAP3K11Q16584 847 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 SUSD4Q5VX71 490 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 KRT85P78386 507 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 ATRNO75882 1429 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 SMCHD1A6NHR9 2005 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 ZKSCAN1P17029 563 aaPredicted RBP12.48□□□□□ -0.41
CALU-206ENST00000542996 ITGA6P23229 1130 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 RBM6P78332 1123 aaKnown RBP12.48□□□□□ -0.41
CALU-206ENST00000542996 GRIK5Q16478 980 aa12.48□□□□□ -0.41
CALU-206ENST00000542996 IFIT1P09914 478 aaKnown RBP12.47□□□□□ -0.41
CALU-206ENST00000542996 CSB-PGBD3P0DP91 1061 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 LONRF3Q496Y0 759 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 FBXO18Q8NFZ0 1043 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 SLAIN2Q9P270 581 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 CDH23Q9H251 3354 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 RFX7Q2KHR2 1363 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 TPM2P07951 284 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 ADD2P35612 726 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 IL17AQ16552 155 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 CCDC191Q8NCU4 936 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 ZNF330Q9Y3S2 320 aaPredicted RBP12.47□□□□□ -0.41
CALU-206ENST00000542996 GSG1L2A8MUP6 293 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 B4E1Z4 1266 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 KIAA2012Q0VF49 1180 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 FUT2Q10981 343 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 NR5A1Q13285 461 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 TAOK2Q9UL54 1235 aa12.47□□□□□ -0.41
CALU-206ENST00000542996 TXNRD3Q86VQ6 643 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms