RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SNTG2Q9NY99 539 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 STARD13Q9Y3M8 1113 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 KCNMB2Q9Y691 235 aa5.52□□□□□ -1.53
SFSWAP-211ENST00000542813 FAM229AH3BQW9 127 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 EREGO14944 169 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 KLF4O43474 513 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 NID1P14543 1247 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 SOX9P48436 509 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 KCNQ4P56696 695 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 COL9A2Q14055 689 aaPredicted RBP5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 BTLAQ7Z6A9 289 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 C1orf127Q8N9H9 656 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 ZNF296Q8WUU4 475 aaPredicted RBP5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 HNRNPLLQ8WVV9 542 aaKnown RBP5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 CEP63Q96MT8 703 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 TMEM74Q96NL1 305 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 TRIM56Q9BRZ2 755 aaKnown RBP5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 PCDH12Q9NPG4 1184 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 IFT57Q9NWB7 429 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 PPP4R2Q9NY27 417 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 TRAK1Q9UPV9 953 aa5.51□□□□□ -1.53
SFSWAP-211ENST00000542813 DYRK3O43781 588 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 DNAJC6O75061 913 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 RLBP1P12271 317 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 TYRO3Q06418 890 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 RASA3Q14644 834 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 PLEKHG4Q58EX7 1191 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 KIAA0319Q5VV43 1072 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 C20orf204Q6ZNR8 217 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 C8orf86Q6ZUL3 223 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 LRP10Q7Z4F1 713 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 RAB44Q7Z6P3 723 aaPredicted RBP5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 C3orf58Q8NDZ4 430 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 CPLX3Q8WVH0 158 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 NT5C1AQ9BXI3 368 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 EHD4Q9H223 541 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 SPC25Q9HBM1 224 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 ABI2Q9NYB9 513 aaPredicted RBP5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 KCNH4Q9UQ05 1017 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 R3HCC1Q9Y3T6 440 aaKnown RBP5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 RB1CC1Q8TDY2 1594 aa5.5□□□□□ -1.53
SFSWAP-211ENST00000542813 CCDC85CA6NKD9 419 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 PPP1R12AO14974 1030 aaPredicted RBP5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 EPB42P16452 691 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 CHMP4BP1P59074 171 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 GLIS3Q8NEA6 775 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 PMEPA1Q969W9 287 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 ANAPC16Q96DE5 110 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 KRTAP4-12Q9BQ66 201 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 SLKQ9H2G2 1235 aaPredicted RBP5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 CNTN3Q9P232 1028 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 PRKAG3Q9UGI9 489 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 PPM1HQ9ULR3 514 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 PRKAB1Q9Y478 270 aa5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 SUPT16HQ9Y5B9 1047 aaKnown RBP5.49□□□□□ -1.53
SFSWAP-211ENST00000542813 FAM221BA6H8Z2 402 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 C9orf172C9J069 976 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 LILRB5O75023 590 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 XYLBO75191 536 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 CDC45O75419 566 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 CES1P23141 567 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 FCGRTP55899 365 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 FAM160A1Q05DH4 1040 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 GRIK4Q16099 956 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 MAP3K11Q16584 847 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 FBXL19Q6PCT2 694 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 ANKRD24Q8TF21 1146 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 RHOVQ96L33 236 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 EFCC1Q9HA90 598 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 KCNQ5Q9NR82 932 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 FANCLQ9NW38 375 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 PPME1Q9Y570 386 aa5.48□□□□□ -1.53
SFSWAP-211ENST00000542813 A0A1W2PP55 124 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 SCO2A0A1W2PP80 73 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 FBXO24O75426 580 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 EDN3P14138 238 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 APOBRQ0VD83 1088 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 TNNI3KQ59H18 835 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 TRAPPC3LQ5T215 181 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 CCDC181Q5TID7 509 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 TTC39BQ5VTQ0 682 aaPredicted RBP5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 PCNX4Q63HM2 1172 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 PRPF40BQ6NWY9 871 aaKnown RBP5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 SV2BQ7L1I2 683 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 NLRP13Q86W25 1043 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 PHC3Q8NDX5 983 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 SH3TC2Q8TF17 1288 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 APPBP2Q92624 585 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 BHMTQ93088 406 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 TMX1Q9H3N1 280 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 LATS2Q9NRM7 1088 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 UBP1Q9NZI7 540 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 AKAP2Q9Y2D5 859 aa5.47□□□□□ -1.53
SFSWAP-211ENST00000542813 GREM1O60565 184 aa5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 PARNO95453 639 aaKnown RBP5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 PF4P02776 101 aa5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 ELNP15502 786 aa5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 GARTP22102 1010 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms