RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 RASGRF1Q13972 1273 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 RAB3GAP1Q15042 981 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 MAP3K11Q16584 847 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 BCS1LQ9Y276 419 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-208ENST00000542570 SPATA31A1Q5TZJ5 1347 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 MROH5Q6ZUA9 1318 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 MEGF6O75095 1541 aa11.77□□□□□ -0.52
TOP3A-208ENST00000542570 ZNF76P36508 570 aa11.77□□□□□ -0.52
TOP3A-208ENST00000542570 MCAMP43121 646 aa11.77□□□□□ -0.52
TOP3A-208ENST00000542570 PIH1D3Q9NQM4 214 aaKnown RBP11.77□□□□□ -0.52
TOP3A-208ENST00000542570 CDC37L1Q7L3B6 337 aa11.77□□□□□ -0.53
TOP3A-208ENST00000542570 CCAR1Q8IX12 1150 aaKnown RBP11.77□□□□□ -0.53
TOP3A-208ENST00000542570 LARGE2Q8N3Y3 721 aa11.77□□□□□ -0.53
TOP3A-208ENST00000542570 HOOK1Q9UJC3 728 aaKnown RBP11.77□□□□□ -0.53
TOP3A-208ENST00000542570 V9GY48 417 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-208ENST00000542570 LAMC1P11047 1609 aa11.77□□□□□ -0.53
TOP3A-208ENST00000542570 CCDC194A0A1B0GVG4 234 aa11.77□□□□□ -0.53
TOP3A-208ENST00000542570 FOXO4P98177 505 aa11.77□□□□□ -0.53
TOP3A-208ENST00000542570 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-208ENST00000542570 KAZALD1Q96I82 304 aa11.77□□□□□ -0.53
TOP3A-208ENST00000542570 KRT23Q9C075 422 aa11.77□□□□□ -0.53
TOP3A-208ENST00000542570 GJB4Q9NTQ9 266 aa11.77□□□□□ -0.53
TOP3A-208ENST00000542570 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.53
TOP3A-208ENST00000542570 PXDNQ92626 1479 aa11.77□□□□□ -0.53
TOP3A-208ENST00000542570 SERPINC1P01008 464 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 TTF2Q9UNY4 1162 aaKnown RBP11.76□□□□□ -0.53
TOP3A-208ENST00000542570 ARHGEF28Q8N1W1 1705 aaKnown RBP11.76□□□□□ -0.53
TOP3A-208ENST00000542570 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 NOL7Q9UMY1 257 aaKnown RBP11.76□□□□□ -0.53
TOP3A-208ENST00000542570 ZNF804BA4D1E1 1349 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 MAST3O60307 1309 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 ZBTB7AO95365 584 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 ZSCAN23Q3MJ62 389 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 C2CD5Q86YS7 1000 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 LINC00116Q8NCU8 138 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 OSBPL3Q9H4L5 887 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 ZNF287Q9HBT7 754 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 NRKQ7Z2Y5 1582 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 FER1L4A9Z1Z3 1794 aa11.76□□□□□ -0.53
TOP3A-208ENST00000542570 AFMP43652 599 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 ZNF830Q96NB3 372 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-208ENST00000542570 HLA-DOAP06340 250 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 IBSPP21815 317 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-208ENST00000542570 CACNB3P54284 484 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 SLF2Q8IX21 1173 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 IFNL3Q8IZI9 196 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 FAM13BQ9NYF5 915 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 GOLGA8HP0CJ92 632 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 PRDX5P30044 214 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 TXNRD1Q16881 649 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 JDP2Q8WYK2 163 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 A0A1B0GVL5 298 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 PPIP5K2O43314 1243 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 TXLNAP40222 546 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 TFAP4Q01664 338 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 MAP4K1Q92918 833 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 ISCA1Q9BUE6 129 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 TAF6LQ9Y6J9 622 aa11.75□□□□□ -0.53
TOP3A-208ENST00000542570 CEMIPQ8WUJ3 1361 aa11.74□□□□□ -0.53
TOP3A-208ENST00000542570 WTIPA6NIX2 430 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-208ENST00000542570 LCORLQ8N3X6 602 aa11.74□□□□□ -0.53
TOP3A-208ENST00000542570 WASF1Q92558 559 aa11.74□□□□□ -0.53
TOP3A-208ENST00000542570 BAG6P46379 1132 aa11.74□□□□□ -0.53
TOP3A-208ENST00000542570 NFIXQ14938 502 aa11.74□□□□□ -0.53
TOP3A-208ENST00000542570 ANGEL1Q9UNK9 670 aaKnown RBP11.74□□□□□ -0.53
TOP3A-208ENST00000542570 A0A0G2JLW4 131 aa11.74□□□□□ -0.53
TOP3A-208ENST00000542570 CYP2E1P05181 493 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-208ENST00000542570 CABP5Q9NP86 173 aa11.74□□□□□ -0.53
TOP3A-208ENST00000542570 THRAP3Q9Y2W1 955 aaKnown RBP11.74□□□□□ -0.53
TOP3A-208ENST00000542570 ERVV-1B6SEH8 477 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 EIF5P55010 431 aaKnown RBP11.73□□□□□ -0.53
TOP3A-208ENST00000542570 GSTO1P78417 241 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 CNNM3Q8NE01 707 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 CCDC47Q96A33 483 aaKnown RBP11.73□□□□□ -0.53
TOP3A-208ENST00000542570 SCAF8Q9UPN6 1271 aaKnown RBP11.73□□□□□ -0.53
TOP3A-208ENST00000542570 RAD17O75943 681 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 POLD1P28340 1107 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 NAT10Q9H0A0 1025 aaKnown RBP11.73□□□□□ -0.53
TOP3A-208ENST00000542570 CNNM2Q9H8M5 875 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 R3HCC1Q9Y3T6 440 aaKnown RBP11.73□□□□□ -0.53
TOP3A-208ENST00000542570 SSH2Q76I76 1423 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 XRCC6P12956 609 aaKnown RBP eCLIP11.73□□□□□ -0.53
TOP3A-208ENST00000542570 IDEP14735 1019 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 KLHL40Q2TBA0 621 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 DEFB132Q7Z7B7 95 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 IQSEC2Q5JU85 1478 aa11.73□□□□□ -0.53
TOP3A-208ENST00000542570 AOX1Q06278 1338 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 CCDC183Q5T5S1 534 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 FTOQ9C0B1 505 aaKnown RBP eCLIP11.72□□□□□ -0.53
TOP3A-208ENST00000542570 MINPP1Q9UNW1 487 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 KIAA1210Q9ULL0 1709 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 CLRN2A0PK11 232 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
TOP3A-208ENST00000542570 FAM43AQ8N2R8 423 aa11.72□□□□□ -0.53
TOP3A-208ENST00000542570 FNBP4Q8N3X1 1017 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-208ENST00000542570 STAMQ92783 540 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms