RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 SNW1Q13573 536 aaKnown RBP11.58□□□□□ -0.56
LMO3-227ENST00000541764 ANO6Q4KMQ2 910 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 ADALQ6DHV7 355 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 FBXO18Q8NFZ0 1043 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 KIAA1524Q8TCG1 905 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 LPIN2Q92539 896 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 USP28Q96RU2 1077 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 MTA3Q9BTC8 594 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 R3HCC1Q9Y3T6 440 aaKnown RBP11.58□□□□□ -0.56
LMO3-227ENST00000541764 CCDC9Q9Y3X0 531 aaKnown RBP11.58□□□□□ -0.56
LMO3-227ENST00000541764 WNK3Q9BYP7 1800 aa11.58□□□□□ -0.56
LMO3-227ENST00000541764 TCRBV5S4A2TA0A5A2 114 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 EXOC5O00471 708 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 EIF5P55010 431 aaKnown RBP11.57□□□□□ -0.56
LMO3-227ENST00000541764 PUM3Q15397 648 aaKnown RBP11.57□□□□□ -0.56
LMO3-227ENST00000541764 CAMK4Q16566 473 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 CCDC73Q6ZRK6 1079 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 RALYLQ86SE5 291 aaKnown RBP11.57□□□□□ -0.56
LMO3-227ENST00000541764 CCAR1Q8IX12 1150 aaKnown RBP11.57□□□□□ -0.56
LMO3-227ENST00000541764 KCNG4Q8TDN1 519 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 CNNM1Q9NRU3 951 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 TRMT112Q9UI30 125 aaKnown RBP11.57□□□□□ -0.56
LMO3-227ENST00000541764 ZBTB1Q9Y2K1 713 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 THRAP3Q9Y2W1 955 aaKnown RBP11.57□□□□□ -0.56
LMO3-227ENST00000541764 NID2Q14112 1375 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 NUP98P52948 1817 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 GTF2F1P35269 517 aaKnown RBP eCLIP11.57□□□□□ -0.56
LMO3-227ENST00000541764 ZNF165P49910 485 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 ZNF75DP51815 510 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 IQCB1Q15051 598 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 STX1AQ16623 288 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 CCDC102BQ68D86 513 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 CKAP2LQ8IYA6 745 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 LINC00301Q8NCQ3 95 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 TMEM87BQ96K49 555 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 MAP7D2Q96T17 732 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 NCOA5Q9HCD5 579 aaKnown RBP11.57□□□□□ -0.56
LMO3-227ENST00000541764 TBC1D2BQ9UPU7 963 aa11.57□□□□□ -0.56
LMO3-227ENST00000541764 COL16A1Q07092 1604 aaPredicted RBP11.56□□□□□ -0.56
LMO3-227ENST00000541764 KLF18A0A0U1RQI7 1052 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 RGL2O15211 777 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 GALR2O43603 387 aaPredicted RBP11.56□□□□□ -0.56
LMO3-227ENST00000541764 CDKL5O76039 1030 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 TRDNQ13061 729 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 PARP10Q53GL7 1025 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 SLC9C2Q5TAH2 1124 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 LUZP1Q86V48 1076 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 SGMS1Q86VZ5 419 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 DZIP3Q86Y13 1208 aaKnown RBP11.56□□□□□ -0.56
LMO3-227ENST00000541764 FMR1NBQ8N0W7 255 aaPredicted RBP11.56□□□□□ -0.56
LMO3-227ENST00000541764 SYNE4Q8N205 404 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 MRPS27Q92552 414 aaKnown RBP11.56□□□□□ -0.56
LMO3-227ENST00000541764 C8orf76Q96K31 380 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 NBPF3Q9H094 633 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 KCNF1Q9H3M0 494 aa11.56□□□□□ -0.56
LMO3-227ENST00000541764 TTC12Q9H892 705 aaPredicted RBP11.56□□□□□ -0.56
LMO3-227ENST00000541764 ANGEL1Q9UNK9 670 aaKnown RBP11.56□□□□□ -0.56
LMO3-227ENST00000541764 UBN2Q6ZU65 1347 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 GOLGA8BA8MQT2 603 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 SH2B2O14492 632 aaPredicted RBP11.55□□□□□ -0.56
LMO3-227ENST00000541764 KINO60870 393 aaKnown RBP11.55□□□□□ -0.56
LMO3-227ENST00000541764 PDE6AP16499 860 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 GPTP24298 496 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 LIFRP42702 1097 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 MTERF4Q7Z6M4 381 aaKnown RBP11.55□□□□□ -0.56
LMO3-227ENST00000541764 MYRIPQ8NFW9 859 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 MRFAP1L1Q96HT8 127 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 STRBPQ96SI9 672 aaKnown RBP11.55□□□□□ -0.56
LMO3-227ENST00000541764 BPIFA3Q9BQP9 254 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 GOLPH3LQ9H4A5 285 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 PIH1D3Q9NQM4 214 aaKnown RBP11.55□□□□□ -0.56
LMO3-227ENST00000541764 ANO10Q9NW15 660 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 ORC3Q9UBD5 711 aaPredicted RBP11.55□□□□□ -0.56
LMO3-227ENST00000541764 PCDHA7Q9UN72 937 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 DOCK2Q92608 1830 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 C4AP0C0L4 1744 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 TIAM2Q8IVF5 1701 aa11.55□□□□□ -0.56
LMO3-227ENST00000541764 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 PATL2C9JE40 543 aaKnown RBP11.54□□□□□ -0.56
LMO3-227ENST00000541764 NEMFO60524 1076 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 SLC5A1P13866 664 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 RCAN1P53805 252 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 HAND2P61296 217 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 MYSM1Q5VVJ2 828 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 PI16Q6UXB8 463 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 CHST3Q7LGC8 479 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 FSIP1Q8NA03 581 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 PDCL3Q9H2J4 239 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 ZNF330Q9Y3S2 320 aaPredicted RBP11.54□□□□□ -0.56
LMO3-227ENST00000541764 PNPLA7Q6ZV29 1317 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 ZNF532Q9HCE3 1301 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 STK36Q9NRP7 1315 aa11.54□□□□□ -0.56
LMO3-227ENST00000541764 SLIT2O94813 1529 aa11.53□□□□□ -0.56
LMO3-227ENST00000541764 UQCRHLA0A096LP55 91 aa11.53□□□□□ -0.56
LMO3-227ENST00000541764 FAM237AA0A1B0GTK4 181 aa11.53□□□□□ -0.56
LMO3-227ENST00000541764 CPLX1O14810 134 aa11.53□□□□□ -0.56
LMO3-227ENST00000541764 UQCRHP07919 91 aa11.53□□□□□ -0.56
LMO3-227ENST00000541764 GNAT2P19087 354 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms