RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 MEGF11A6BM72 1044 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 FCGRTP55899 365 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 PDE3AQ14432 1141 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 SGO2Q562F6 1265 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 ARTNQ5T4W7 220 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 DTHD1Q6ZMT9 781 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 CLEC10AQ8IUN9 316 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 TMPRSS13Q9BYE2 586 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 ZC3H12CQ9C0D7 883 aaKnown RBP6.86□□□□□ -1.31
MDM2-227ENST00000540709 ZNF576Q9H609 170 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 TRAK1Q9UPV9 953 aa6.86□□□□□ -1.31
MDM2-227ENST00000540709 ECEL1O95672 775 aa6.85□□□□□ -1.31
MDM2-227ENST00000540709 MAP4P27816 1152 aaKnown RBP6.85□□□□□ -1.31
MDM2-227ENST00000540709 GRM2Q14416 872 aa6.85□□□□□ -1.31
MDM2-227ENST00000540709 NFKBIBQ15653 356 aa6.85□□□□□ -1.31
MDM2-227ENST00000540709 AKAP4Q5JQC9 854 aa6.85□□□□□ -1.31
MDM2-227ENST00000540709 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.85□□□□□ -1.31
MDM2-227ENST00000540709 AEBP1Q8IUX7 1158 aa6.85□□□□□ -1.31
MDM2-227ENST00000540709 FBLIM1Q8WUP2 373 aa6.85□□□□□ -1.31
MDM2-227ENST00000540709 ALKBH8Q96BT7 664 aaKnown RBP6.85□□□□□ -1.31
MDM2-227ENST00000540709 ABCB6Q9NP58 842 aa6.85□□□□□ -1.31
MDM2-227ENST00000540709 RNF112Q9ULX5 631 aa6.85□□□□□ -1.31
MDM2-227ENST00000540709 AKAP2Q9Y2D5 859 aa6.85□□□□□ -1.31
MDM2-227ENST00000540709 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
MDM2-227ENST00000540709 GSC2O15499 205 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 HYAL3O43820 417 aaPredicted RBP6.84□□□□□ -1.31
MDM2-227ENST00000540709 EIF4EBP3O60516 100 aaPredicted RBP6.84□□□□□ -1.31
MDM2-227ENST00000540709 CTSBP07858 339 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 KCNA1Q09470 495 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 NFIAQ12857 509 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 LRP8Q14114 963 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.84□□□□□ -1.31
MDM2-227ENST00000540709 RNF43Q68DV7 783 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 DYMQ7RTS9 669 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 ZSCAN29Q8IWY8 852 aaPredicted RBP6.84□□□□□ -1.31
MDM2-227ENST00000540709 FBXL6Q8N531 539 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 SMG8Q8ND04 991 aaKnown RBP6.84□□□□□ -1.31
MDM2-227ENST00000540709 MFSD14AQ96MC6 490 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 FAM83CQ9BQN1 747 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 KRTAP9-2Q9BYQ4 174 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 BCO2Q9BYV7 579 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 PCMTD2Q9NV79 361 aa6.84□□□□□ -1.31
MDM2-227ENST00000540709 GPN3Q9UHW5 284 aaPredicted RBP6.84□□□□□ -1.31
MDM2-227ENST00000540709 WDR64B1ANS9 1081 aa6.83□□□□□ -1.32
MDM2-227ENST00000540709 B3GALT4O96024 378 aa6.83□□□□□ -1.32
MDM2-227ENST00000540709 TGFB1P01137 390 aa6.83□□□□□ -1.32
MDM2-227ENST00000540709 ITPKAP23677 461 aa6.83□□□□□ -1.32
MDM2-227ENST00000540709 SOX4Q06945 474 aaPredicted RBP6.83□□□□□ -1.32
MDM2-227ENST00000540709 ZFYVE1Q9HBF4 777 aa6.83□□□□□ -1.32
MDM2-227ENST00000540709 AP4E1Q9UPM8 1137 aa6.83□□□□□ -1.32
MDM2-227ENST00000540709 TREHO43280 583 aa6.82□□□□□ -1.32
MDM2-227ENST00000540709 RAB6AP20340 208 aa6.82□□□□□ -1.32
MDM2-227ENST00000540709 DSC3Q14574 896 aa6.82□□□□□ -1.32
MDM2-227ENST00000540709 HP1BP3Q5SSJ5 553 aaPredicted RBP6.82□□□□□ -1.32
MDM2-227ENST00000540709 CDPF1Q6NVV7 123 aa6.82□□□□□ -1.32
MDM2-227ENST00000540709 NXPE4Q6UWF7 544 aa6.82□□□□□ -1.32
MDM2-227ENST00000540709 SLC51AQ86UW1 340 aa6.82□□□□□ -1.32
MDM2-227ENST00000540709 GLIS3Q8NEA6 775 aa6.82□□□□□ -1.32
MDM2-227ENST00000540709 TRIM56Q9BRZ2 755 aaKnown RBP6.82□□□□□ -1.32
MDM2-227ENST00000540709 TRAIPQ9BWF2 469 aa6.82□□□□□ -1.32
MDM2-227ENST00000540709 SUGCTQ9HAC7 445 aa6.82□□□□□ -1.32
MDM2-227ENST00000540709 HIF3AQ9Y2N7 669 aa6.82□□□□□ -1.32
MDM2-227ENST00000540709 FAM95CA0A1B0GW59 222 aa6.81□□□□□ -1.32
MDM2-227ENST00000540709 TIAF1O95411 115 aa6.81□□□□□ -1.32
MDM2-227ENST00000540709 FAAP100Q0VG06 881 aa6.81□□□□□ -1.32
MDM2-227ENST00000540709 PRPF40BQ6NWY9 871 aaKnown RBP6.81□□□□□ -1.32
MDM2-227ENST00000540709 C2CD4AQ8NCU7 369 aaPredicted RBP6.81□□□□□ -1.32
MDM2-227ENST00000540709 SHKBP1Q8TBC3 707 aa6.81□□□□□ -1.32
MDM2-227ENST00000540709 SETDB2Q96T68 719 aa6.81□□□□□ -1.32
MDM2-227ENST00000540709 DBNDD2Q9BQY9 259 aa6.81□□□□□ -1.32
MDM2-227ENST00000540709 NRSN2Q9GZP1 204 aa6.81□□□□□ -1.32
MDM2-227ENST00000540709 LGR6Q9HBX8 967 aa6.81□□□□□ -1.32
MDM2-227ENST00000540709 ADH5P11766 374 aa6.8□□□□□ -1.32
MDM2-227ENST00000540709 LIG1P18858 919 aa6.8□□□□□ -1.32
MDM2-227ENST00000540709 PTPN12Q05209 780 aaKnown RBP6.8□□□□□ -1.32
MDM2-227ENST00000540709 PPP2R3AQ06190 1150 aa6.8□□□□□ -1.32
MDM2-227ENST00000540709 AP3B2Q13367 1082 aa6.8□□□□□ -1.32
MDM2-227ENST00000540709 ENOX2Q16206 610 aaKnown RBP6.8□□□□□ -1.32
MDM2-227ENST00000540709 PAOXQ6QHF9 649 aa6.8□□□□□ -1.32
MDM2-227ENST00000540709 KCNB2Q92953 911 aa6.8□□□□□ -1.32
MDM2-227ENST00000540709 YIPF2Q9BWQ6 316 aa6.8□□□□□ -1.32
MDM2-227ENST00000540709 ATG3Q9NT62 314 aa6.8□□□□□ -1.32
MDM2-227ENST00000540709 WWC3Q9ULE0 1092 aa6.8□□□□□ -1.32
MDM2-227ENST00000540709 KRTAP9-6A0A140TA67 174 aa6.79□□□□□ -1.32
MDM2-227ENST00000540709 COBLO75128 1261 aa6.79□□□□□ -1.32
MDM2-227ENST00000540709 NFICP08651 508 aa6.79□□□□□ -1.32
MDM2-227ENST00000540709 PDIA4P13667 645 aaKnown RBP6.79□□□□□ -1.32
MDM2-227ENST00000540709 ASPAP45381 313 aa6.79□□□□□ -1.32
MDM2-227ENST00000540709 ATP2B2Q01814 1243 aa6.79□□□□□ -1.32
MDM2-227ENST00000540709 RPS26P11Q5JNZ5 115 aaPredicted RBP6.79□□□□□ -1.32
MDM2-227ENST00000540709 ZDHHC13Q8IUH4 622 aa6.79□□□□□ -1.32
MDM2-227ENST00000540709 GIMAP7Q8NHV1 300 aa6.79□□□□□ -1.32
MDM2-227ENST00000540709 PSMG3-AS1Q96PY0 264 aa6.79□□□□□ -1.32
MDM2-227ENST00000540709 TMEM39AQ9NV64 488 aa6.79□□□□□ -1.32
MDM2-227ENST00000540709 ACTL7BQ9Y614 415 aa6.79□□□□□ -1.32
MDM2-227ENST00000540709 AOC2O75106 756 aa6.78□□□□□ -1.32
MDM2-227ENST00000540709 GRIK1P39086 918 aa6.78□□□□□ -1.32
MDM2-227ENST00000540709 TBC1D32Q96NH3 1257 aa6.78□□□□□ -1.32
MDM2-227ENST00000540709 ASB16Q96NS5 453 aa6.78□□□□□ -1.32
MDM2-227ENST00000540709 OSBPL1AQ9BXW6 950 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms