RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, human

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDH1-215	ENST00000539945	ARAP2	Q8WZ64	1704 aa		11.64	□□□□□ -0.55
MDH1-215	ENST00000539945	CASZ1	Q86V15	1759 aa		11.64	□□□□□ -0.55
MDH1-215	ENST00000539945	MED23	Q9ULK4	1368 aa		11.63	□□□□□ -0.55
MDH1-215	ENST00000539945		A0A0D9SFI3	127 aa		11.63	□□□□□ -0.55
MDH1-215	ENST00000539945	SLC5A1	P13866	664 aa		11.63	□□□□□ -0.55
MDH1-215	ENST00000539945	POTEA	Q6S8J7	498 aa		11.63	□□□□□ -0.55
MDH1-215	ENST00000539945	HELB	Q8NG08	1087 aa	Predicted RBP	11.63	□□□□□ -0.55
MDH1-215	ENST00000539945	EP400	Q96L91	3159 aa		11.63	□□□□□ -0.55
MDH1-215	ENST00000539945	CCDC171	Q6TFL3	1326 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	CD2BP2	O95400	341 aa	Known RBP	11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	UQCRFS1P1	P0C7P4	283 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	ARID4A	P29374	1257 aa	Predicted RBP	11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	TM4SF1	P30408	202 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	PTH1R	Q03431	593 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	CHRND	Q07001	517 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	MAP4K1	Q92918	833 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	KCNB2	Q92953	911 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	PRKD2	Q9BZL6	878 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	PALD1	Q9ULE6	856 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	RGPD4	Q7Z3J3	1758 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	TNS1	Q9HBL0	1735 aa	Known RBP	11.62	□□□□□ -0.55
MDH1-215	ENST00000539945	COL4A1	P02462	1669 aa		11.62	□□□□□ -0.55
MDH1-215	ENST00000539945		K7ELQ4	463 aa	Predicted RBP	11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	TAF5L	O75529	589 aa		11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	RPS8	P62241	208 aa	Known RBP	11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	SCARF1	Q14162	830 aa		11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	MCMDC2	Q4G0Z9	681 aa		11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	CCDC102B	Q68D86	513 aa		11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	CNBD1	Q8NA66	436 aa		11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	FLAD1	Q8NFF5	587 aa		11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	HELLS	Q9NRZ9	838 aa		11.61	□□□□□ -0.55
MDH1-215	ENST00000539945		V9GY48	417 aa	Predicted RBP	11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	AKAP11	Q9UKA4	1901 aa		11.61	□□□□□ -0.55
MDH1-215	ENST00000539945	NPHP1	O15259	732 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	RNF113A	O15541	343 aa	Known RBP	11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	ZFY	P08048	801 aa	Predicted RBP	11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	MCAM	P43121	646 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	NECTIN1	Q15223	517 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	ZNF827	Q17R98	1081 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	ZMYM1	Q5SVZ6	1142 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	PRR5L	Q6MZQ0	368 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	CELF1	Q92879	486 aa	Known RBP	11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	ANTXR1	Q9H6X2	564 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	TFCP2L1	Q9NZI6	479 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	MINPP1	Q9UNW1	487 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	SERPINB2	P05120	415 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	ZAP70	P43403	619 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	PHKA1	P46020	1223 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	NEK4	P51957	841 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	UBE4A	Q14139	1066 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	TTF1	Q15361	905 aa	Predicted RBP	11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	CCDC24	Q8N4L8	307 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	RBM8A	Q9Y5S9	174 aa	Known RBP	11.6	□□□□□ -0.55
MDH1-215	ENST00000539945	SNX14	Q9Y5W7	946 aa		11.6	□□□□□ -0.55
MDH1-215	ENST00000539945		A0A1B0GUL6	1792 aa		11.59	□□□□□ -0.55
MDH1-215	ENST00000539945	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.59	□□□□□ -0.55
MDH1-215	ENST00000539945	MCM2	P49736	904 aa		11.59	□□□□□ -0.55
MDH1-215	ENST00000539945	ST5	P78524	1137 aa		11.59	□□□□□ -0.55
MDH1-215	ENST00000539945	NLGN1	Q8N2Q7	840 aa		11.59	□□□□□ -0.55
MDH1-215	ENST00000539945	ANKRD2	Q9GZV1	360 aa		11.59	□□□□□ -0.55
MDH1-215	ENST00000539945	TAF1	P21675	1872 aa		11.58	□□□□□ -0.55
MDH1-215	ENST00000539945	SNAP23	O00161	211 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	POLRMT	O00411	1230 aa	Known RBP	11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	CHGB	P05060	677 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	CYP2E1	P05181	493 aa	Predicted RBP	11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	ZKSCAN1	P17029	563 aa	Predicted RBP	11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	KCNJ4	P48050	445 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	DDR1	Q08345	913 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	CRY2	Q49AN0	593 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	RNF20	Q5VTR2	975 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	CREB3L3	Q68CJ9	461 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	ZSCAN25	Q6NSZ9	544 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	PI16	Q6UXB8	463 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	COL23A1	Q86Y22	540 aa	Predicted RBP	11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	SPATA5	Q8NB90	893 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	SEC62	Q99442	399 aa	Known RBP	11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	TM6SF1	Q9BZW5	370 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	IL21	Q9HBE4	155 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	HMG20B	Q9P0W2	317 aa		11.58	□□□□□ -0.56
MDH1-215	ENST00000539945	ZNF804B	A4D1E1	1349 aa		11.57	□□□□□ -0.56
MDH1-215	ENST00000539945	KLRG2	A4D1S0	409 aa	Predicted RBP	11.57	□□□□□ -0.56
MDH1-215	ENST00000539945	SLC27A2	O14975	620 aa		11.57	□□□□□ -0.56
MDH1-215	ENST00000539945	RASGRF1	Q13972	1273 aa		11.57	□□□□□ -0.56
MDH1-215	ENST00000539945	TSGA10IP	Q3SY00	556 aa		11.57	□□□□□ -0.56
MDH1-215	ENST00000539945	PRPF40B	Q6NWY9	871 aa	Known RBP	11.57	□□□□□ -0.56
MDH1-215	ENST00000539945	SLK	Q9H2G2	1235 aa	Predicted RBP	11.57	□□□□□ -0.56
MDH1-215	ENST00000539945	MAST3	O60307	1309 aa		11.56	□□□□□ -0.56
MDH1-215	ENST00000539945	LCE2B	O14633	110 aa		11.56	□□□□□ -0.56
MDH1-215	ENST00000539945	DDIT3	P35638	169 aa		11.56	□□□□□ -0.56
MDH1-215	ENST00000539945	GRAP	Q13588	217 aa		11.56	□□□□□ -0.56
MDH1-215	ENST00000539945	UBE3C	Q15386	1083 aa		11.56	□□□□□ -0.56
MDH1-215	ENST00000539945	TJAP1	Q5JTD0	557 aa		11.56	□□□□□ -0.56
MDH1-215	ENST00000539945	CCDC129	Q6ZRS4	1044 aa		11.56	□□□□□ -0.56
MDH1-215	ENST00000539945	SPRYD3	Q8NCJ5	442 aa		11.56	□□□□□ -0.56
MDH1-215	ENST00000539945	GRAPL	Q8TC17	118 aa	Predicted RBP	11.56	□□□□□ -0.56

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