RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 NEK4P51957 841 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 CCDC40Q4G0X9 1142 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 FBXW10Q5XX13 1052 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 CAPRIN2Q6IMN6 1127 aaKnown RBP6.99□□□□□ -1.29
SNHG1-211ENST00000539921 ARMC9Q7Z3E5 817 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 SESTD1Q86VW0 696 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 PLEKHM2Q8IWE5 1019 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 GALNT15Q8N3T1 639 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 HELBQ8NG08 1087 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-211ENST00000539921 B4GALNT2Q8NHY0 566 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 LMBR1Q8WVP7 490 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 SMARCC1Q92922 1105 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-211ENST00000539921 CCDC34Q96HJ3 373 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 JAKMIP1Q96N16 626 aaKnown RBP6.99□□□□□ -1.29
SNHG1-211ENST00000539921 CARD6Q9BX69 1037 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 BICC1Q9H694 974 aaKnown RBP6.99□□□□□ -1.29
SNHG1-211ENST00000539921 SH2B1Q9NRF2 756 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-211ENST00000539921 LMCD1Q9NZU5 365 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 NRBP1Q9UHY1 535 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 TRPC6Q9Y210 931 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 WDR37Q9Y2I8 494 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 KDM6AO15550 1401 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-211ENST00000539921 CDHR2Q9BYE9 1310 aa6.99□□□□□ -1.29
SNHG1-211ENST00000539921 ZNF518AQ6AHZ1 1483 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 IFT140Q96RY7 1462 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 NSD2O96028 1365 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 KIAA0232Q92628 1395 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 ABCC3O15438 1527 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 TOPBP1Q92547 1522 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 GOLGA6CA6NDK9 693 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 GOLGA6BA6NDN3 693 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 SMARCA5O60264 1052 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 RNF40O75150 1001 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 E2F6O75461 281 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 AP1G2O75843 785 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 SMNDC1O75940 238 aaKnown RBP eCLIP6.98□□□□□ -1.293e-14■■■■■ 31.4
SNHG1-211ENST00000539921 GOLGA6DP0CG33 693 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 EPB41P11171 864 aaKnown RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 IDO1P14902 403 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 PAPOLAP51003 745 aaKnown RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 PSMD7P51665 324 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 PABPC4Q13310 644 aaKnown RBP eCLIP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CASP8Q14790 479 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 DBN1Q16643 649 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 SLC4A8Q2Y0W8 1093 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 GJC2Q5T442 439 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 MIS18BP1Q6P0N0 1132 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CCDC80Q76M96 950 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 HOMER1Q86YM7 354 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 TRIM42Q8IWZ5 723 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 SAMD3Q8N6K7 520 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 TEX9Q8N6V9 391 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CFAP61Q8NHU2 1237 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 FAM76AQ8TAV0 307 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 PARD3BQ8TEW8 1205 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 PIK3R5Q8WYR1 880 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CCDC102AQ96A19 550 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 SPDL1Q96EA4 605 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 ACSBG1Q96GR2 724 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 RBM17Q96I25 401 aaKnown RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 RPGRIP1Q96KN7 1286 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 ZSCAN31Q96LW9 406 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 SH3GL2Q99962 352 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 POLR3CQ9BUI4 534 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 DCTPP1Q9H773 170 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 KIF9Q9HAQ2 790 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 ANO10Q9NW15 660 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 GOLGA6AQ9NYA3 693 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CIDEBQ9UHD4 219 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 ZNF777Q9ULD5 760 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CNPY2Q9Y2B0 182 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CTDP1Q9Y5B0 961 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CAPN7Q9Y6W3 813 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CHD2O14647 1828 aaKnown RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CPSF1Q10570 1443 aaKnown RBP6.98□□□□□ -1.29
SNHG1-211ENST00000539921 CEP152O94986 1710 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 EVC2Q86UK5 1308 aa6.98□□□□□ -1.29
SNHG1-211ENST00000539921 NUP155O75694 1391 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 TARSL2A2RTX5 802 aaKnown RBP6.97□□□□□ -1.29
SNHG1-211ENST00000539921 SPDYE3A6NKU9 549 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 GOLGA8KD6RF30 607 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 URI1O94763 535 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-211ENST00000539921 FMNL1O95466 1100 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-211ENST00000539921 VIMP08670 466 aaKnown RBP6.97□□□□□ -1.29
SNHG1-211ENST00000539921 CNGA1P29973 690 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 GBP2P32456 591 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-211ENST00000539921 IRAK1P51617 712 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 CHMP4BP1P59074 171 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 PIP4K2BP78356 416 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 APBA1Q02410 837 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 XRCC4Q13426 336 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 CUL3Q13618 768 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 NAA25Q14CX7 972 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 WHAMMP3Q1A5X7 153 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 TSNAXIP1Q2TAA8 658 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 LRRC23Q53EV4 343 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-211ENST00000539921 HSP90AB2PQ58FF8 381 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 RRP12Q5JTH9 1297 aaKnown RBP6.97□□□□□ -1.29
SNHG1-211ENST00000539921 ATL3Q6DD88 541 aa6.97□□□□□ -1.29
SNHG1-211ENST00000539921 SMYD5Q6GMV2 418 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms