RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CCDC57Q2TAC2 916 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 KMT5BQ4FZB7 885 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.34■□□□□ 0.05
UBE3B-209ENST00000539584 TRMT1Q9NXH9 659 aaKnown RBP15.34■□□□□ 0.05
UBE3B-209ENST00000539584 HPS5Q9UPZ3 1129 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 NBPF26B4DH59 902 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 CCDC93Q567U6 631 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 GORABQ5T7V8 394 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 NBPF14Q5TI25 921 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 NBPF10Q6P3W6 841 aaKnown RBP15.34■□□□□ 0.05
UBE3B-209ENST00000539584 TMC6Q7Z403 805 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 NBPF15Q8N660 670 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 ZNF512BQ96KM6 892 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-209ENST00000539584 NOL10Q9BSC4 688 aaKnown RBP15.34■□□□□ 0.05
UBE3B-209ENST00000539584 PLA2G12BQ9BX93 195 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 CPDO75976 1380 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 MAP3K15Q6ZN16 1313 aa15.33■□□□□ 0.05
UBE3B-209ENST00000539584 NUP188Q5SRE5 1749 aa15.33■□□□□ 0.05
UBE3B-209ENST00000539584 POLR3DP05423 398 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-209ENST00000539584 TPM1P09493 284 aa15.33■□□□□ 0.04
UBE3B-209ENST00000539584 BMS1Q14692 1282 aaKnown RBP15.33■□□□□ 0.04
UBE3B-209ENST00000539584 WASHC4Q2M389 1173 aa15.33■□□□□ 0.04
UBE3B-209ENST00000539584 LRRC24Q50LG9 513 aa15.33■□□□□ 0.04
UBE3B-209ENST00000539584 ARMCX5Q6P1M9 558 aa15.33■□□□□ 0.04
UBE3B-209ENST00000539584 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.33■□□□□ 0.04
UBE3B-209ENST00000539584 ZHX1Q9UKY1 873 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-209ENST00000539584 HPSEQ9Y251 543 aa15.33■□□□□ 0.04
UBE3B-209ENST00000539584 PFKFB1P16118 471 aa15.33■□□□□ 0.04
UBE3B-209ENST00000539584 SYKP43405 635 aa15.33■□□□□ 0.04
UBE3B-209ENST00000539584 FANCCQ00597 558 aa15.33■□□□□ 0.04
UBE3B-209ENST00000539584 FKBP4Q02790 459 aaKnown RBP eCLIP15.33■□□□□ 0.04
UBE3B-209ENST00000539584 TTLL5Q6EMB2 1281 aa15.33■□□□□ 0.04
UBE3B-209ENST00000539584 CHST3Q7LGC8 479 aa15.33■□□□□ 0.04
UBE3B-209ENST00000539584 HOOK1Q9UJC3 728 aaKnown RBP15.33■□□□□ 0.04
UBE3B-209ENST00000539584 ZMYM6O95789 1325 aa15.32■□□□□ 0.04
UBE3B-209ENST00000539584 TJP1Q07157 1748 aa15.32■□□□□ 0.04
UBE3B-209ENST00000539584 GOLGA6L9A6NEM1 432 aa15.32■□□□□ 0.04
UBE3B-209ENST00000539584 PIP4K2AP48426 406 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-209ENST00000539584 ETF1P62495 437 aaKnown RBP15.32■□□□□ 0.04
UBE3B-209ENST00000539584 MYL5Q02045 173 aa15.32■□□□□ 0.04
UBE3B-209ENST00000539584 TTF1Q15361 905 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-209ENST00000539584 PROSER2Q86WR7 435 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-209ENST00000539584 XAGE2Q96GT9 111 aa15.32■□□□□ 0.04
UBE3B-209ENST00000539584 ANGEL1Q9UNK9 670 aaKnown RBP15.32■□□□□ 0.04
UBE3B-209ENST00000539584 PCDH11XQ9BZA7 1347 aa15.32■□□□□ 0.04
UBE3B-209ENST00000539584 PCDH11YQ9BZA8 1340 aa15.32■□□□□ 0.04
UBE3B-209ENST00000539584 FOXP2O15409 715 aa15.31■□□□□ 0.04
UBE3B-209ENST00000539584 ZSCAN12O43309 604 aa15.31■□□□□ 0.04
UBE3B-209ENST00000539584 H2AFXP16104 143 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-209ENST00000539584 NAA30Q147X3 362 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-209ENST00000539584 TMEM87BQ96K49 555 aa15.31■□□□□ 0.04
UBE3B-209ENST00000539584 ISCA1Q9BUE6 129 aa15.31■□□□□ 0.04
UBE3B-209ENST00000539584 TMX1Q9H3N1 280 aa15.31■□□□□ 0.04
UBE3B-209ENST00000539584 DCCP43146 1447 aa15.31■□□□□ 0.04
UBE3B-209ENST00000539584 DDX60Q8IY21 1712 aaKnown RBP15.31■□□□□ 0.04
UBE3B-209ENST00000539584 ELF2Q15723 593 aa15.31■□□□□ 0.04
UBE3B-209ENST00000539584 FBXO38Q6PIJ6 1188 aa15.31■□□□□ 0.04
UBE3B-209ENST00000539584 OLFM4Q6UX06 510 aa15.31■□□□□ 0.04
UBE3B-209ENST00000539584 TTLL7Q6ZT98 887 aa15.31■□□□□ 0.04
UBE3B-209ENST00000539584 ARGLU1Q9NWB6 273 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-209ENST00000539584 ADAMTSL3P82987 1691 aa15.3■□□□□ 0.04
UBE3B-209ENST00000539584 ATRNO75882 1429 aa15.3■□□□□ 0.04
UBE3B-209ENST00000539584 A0A0G2JLW4 131 aa15.3■□□□□ 0.04
UBE3B-209ENST00000539584 ATP8B1O43520 1251 aa15.3■□□□□ 0.04
UBE3B-209ENST00000539584 ANTXR2P58335 489 aa15.3■□□□□ 0.04
UBE3B-209ENST00000539584 TERF2Q15554 542 aa15.3■□□□□ 0.04
UBE3B-209ENST00000539584 ZNF771Q7L3S4 317 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-209ENST00000539584 CCDC9Q9Y3X0 531 aaKnown RBP15.3■□□□□ 0.04
UBE3B-209ENST00000539584 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.04
UBE3B-209ENST00000539584 UBR2Q8IWV8 1755 aa15.3■□□□□ 0.04
UBE3B-209ENST00000539584 GPAA1O43292 621 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 CUTAO60888 179 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 SLFN14P0C7P3 912 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 UBASH3AP57075 661 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 NKX1-1Q15270 411 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-209ENST00000539584 ALG1Q9BT22 464 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 NWD2Q9ULI1 1742 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 PCCAP05165 728 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-209ENST00000539584 CSF1RP07333 972 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 METAP2P50579 478 aaKnown RBP eCLIP15.29■□□□□ 0.04
UBE3B-209ENST00000539584 TCIRG1Q13488 830 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 TRIM29Q14134 588 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 RESP18Q5W5W9 173 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 CCDC102BQ68D86 513 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 SYT10Q6XYQ8 523 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 VPS37DQ86XT2 251 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 WASF1Q92558 559 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 ERCC4Q92889 916 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-209ENST00000539584 ZNF594Q96JF6 807 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-209ENST00000539584 STK36Q9NRP7 1315 aa15.29■□□□□ 0.04
UBE3B-209ENST00000539584 A0A087WWV3 80 aa15.28■□□□□ 0.04
UBE3B-209ENST00000539584 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
UBE3B-209ENST00000539584 KIF28PB7ZC32 967 aa15.28■□□□□ 0.04
UBE3B-209ENST00000539584 ARHGAP6O43182 974 aa15.28■□□□□ 0.04
UBE3B-209ENST00000539584 SERPINC1P01008 464 aa15.28■□□□□ 0.04
UBE3B-209ENST00000539584 PTPAQ15257 358 aa15.28■□□□□ 0.04
UBE3B-209ENST00000539584 UBE3CQ15386 1083 aa15.28■□□□□ 0.04
UBE3B-209ENST00000539584 OTUD7BQ6GQQ9 843 aa15.28■□□□□ 0.04
UBE3B-209ENST00000539584 HOMER1Q86YM7 354 aa15.28■□□□□ 0.04
UBE3B-209ENST00000539584 VSTM4Q8IW00 320 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms