RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CHADLQ6NUI6 762 aa4.3□□□□□ -1.72
PTPN22-211ENST00000538253 CDC37L1Q7L3B6 337 aa4.3□□□□□ -1.72
PTPN22-211ENST00000538253 NLGN2Q8NFZ4 835 aa4.3□□□□□ -1.72
PTPN22-211ENST00000538253 TDRD7Q8NHU6 1098 aaKnown RBP4.3□□□□□ -1.72
PTPN22-211ENST00000538253 CRNKL1Q9BZJ0 848 aaKnown RBP4.3□□□□□ -1.72
PTPN22-211ENST00000538253 DHX36Q9H2U1 1008 aaKnown RBP4.3□□□□□ -1.72
PTPN22-211ENST00000538253 ZNF219Q9P2Y4 722 aaPredicted RBP4.3□□□□□ -1.72
PTPN22-211ENST00000538253 CTNNA3Q9UI47 895 aa4.3□□□□□ -1.72
PTPN22-211ENST00000538253 GJA3Q9Y6H8 435 aa4.3□□□□□ -1.72
PTPN22-211ENST00000538253 FPGT-TNNI3KV9GXZ4 949 aa4.3□□□□□ -1.72
PTPN22-211ENST00000538253 NUP98P52948 1817 aa4.3□□□□□ -1.72
PTPN22-211ENST00000538253 ATP5JP18859 108 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 KIAA1211Q6ZU35 1233 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 TTC6Q86TZ1 520 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 C2orf69Q8N8R5 385 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 SH2D4AQ9H788 454 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 RAD50Q92878 1312 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 A0A1B0GUL7 405 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 ENTPD3O75355 529 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 KCNA3P22001 575 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 ARID4AP29374 1257 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 EPHX2P34913 555 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 RBM5P52756 815 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 PABPC4Q13310 644 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 GIMAP6Q6P9H5 292 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 EVI5LQ96CN4 794 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 DNAJC2Q99543 621 aaKnown RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 UPF2Q9HAU5 1272 aaKnown RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 SEC31BQ9NQW1 1179 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 RAI14Q9P0K7 980 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 NFKBIEO00221 500 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 HSP90AA1P07900 732 aaKnown RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 IREB2P48200 963 aaKnown RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 ZNF280AP59817 542 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 IRX3P78415 501 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 MFSD14BQ5SR56 506 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 NAA16Q6N069 864 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 GPATCH11Q8N954 259 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 GTF3C2Q8WUA4 911 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 FAM163AQ96GL9 167 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 CRBNQ96SW2 442 aa4.29□□□□□ -1.72
PTPN22-211ENST00000538253 ZNF277Q9NRM2 450 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-211ENST00000538253 RIMBP2O15034 1052 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 CA12O43570 354 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 FGFR2P21802 821 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 RFX5P48382 616 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-211ENST00000538253 APLP1P51693 650 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 CHAF1AQ13111 956 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-211ENST00000538253 AOC3Q16853 763 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 KIF4BQ2VIQ3 1234 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 FAM83AQ86UY5 434 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 SMC5Q8IY18 1101 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 XAGE2Q96GT9 111 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 BEGAINQ9BUH8 593 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 RNF41Q9H4P4 317 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-211ENST00000538253 GPRC5DQ9NZD1 345 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 DDX60Q8IY21 1712 aaKnown RBP4.28□□□□□ -1.72
PTPN22-211ENST00000538253 INHBEP58166 350 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 GTF2IP78347 998 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 SETQ01105 290 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-211ENST00000538253 ANKRD45Q5TZF3 282 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 RNF20Q5VTR2 975 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 USP48Q86UV5 1035 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 SPATA5Q8NB90 893 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 CCDC102AQ96A19 550 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 HHIPL1Q96JK4 782 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 SIL1Q9H173 461 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 AS3MTQ9HBK9 375 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 DIAPH3Q9NSV4 1193 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 CNOT7Q9UIV1 285 aaKnown RBP4.28□□□□□ -1.72
PTPN22-211ENST00000538253 ARFGEF1Q9Y6D6 1849 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 MX1P20591 662 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 CXCL9Q07325 125 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 TFCP2Q12800 502 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 UBE3CQ15386 1083 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 CCDC102BQ68D86 513 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 FAM177A1Q8N128 213 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-211ENST00000538253 FAM43AQ8N2R8 423 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 CCDC85AQ96PX6 553 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-211ENST00000538253 CABP5Q9NP86 173 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 SWAP70Q9UH65 585 aa4.28□□□□□ -1.72
PTPN22-211ENST00000538253 N4BP2Q86UW6 1770 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-211ENST00000538253 TUBGCP6Q96RT7 1819 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 DLEC1Q9Y238 1755 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 ALDH1A1P00352 501 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 GMPSP49915 693 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-211ENST00000538253 AMIGO3Q86WK7 504 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 FOXP4Q8IVH2 680 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-211ENST00000538253 CCDC17Q96LX7 622 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 TTF2Q9UNY4 1162 aaKnown RBP4.27□□□□□ -1.73
PTPN22-211ENST00000538253 APPP05067 770 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 YBX3P16989 372 aaKnown RBP eCLIP4.27□□□□□ -1.73
PTPN22-211ENST00000538253 PPP4CP60510 307 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 CHD1LQ86WJ1 897 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 AIDAQ96BJ3 306 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 FAM84BQ96KN1 310 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-211ENST00000538253 ZDHHC15Q96MV8 337 aa4.27□□□□□ -1.73
PTPN22-211ENST00000538253 PDGFDQ9GZP0 370 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-211ENST00000538253 TAF1DQ9H5J8 278 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-211ENST00000538253 HELLSQ9NRZ9 838 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms