RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 HELLSQ9NRZ9 838 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 VPS18Q9P253 973 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 CYP21A2P08686 494 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 EXOSC10Q01780 885 aaKnown RBP12.42□□□□□ -0.42
LMO3-215ENST00000537304 TBX2Q13207 712 aaPredicted RBP12.42□□□□□ -0.42
LMO3-215ENST00000537304 SF3B2Q13435 895 aaKnown RBP12.42□□□□□ -0.42
LMO3-215ENST00000537304 CT47A1Q5JQC4 288 aaPredicted RBP12.42□□□□□ -0.42
LMO3-215ENST00000537304 SPECC1LQ69YQ0 1117 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 CCDC91Q7Z6B0 441 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 CCDC12Q8WUD4 166 aaPredicted RBP12.42□□□□□ -0.42
LMO3-215ENST00000537304 KIFC2Q96AC6 838 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 C8orf76Q96K31 380 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 CCDC8Q9H0W5 538 aaPredicted RBP12.42□□□□□ -0.42
LMO3-215ENST00000537304 ZCCHC17Q9NP64 241 aaKnown RBP12.42□□□□□ -0.42
LMO3-215ENST00000537304 CDC23Q9UJX2 597 aa12.42□□□□□ -0.42
LMO3-215ENST00000537304 RGPD8O14715 1765 aaPredicted RBP12.41□□□□□ -0.42
LMO3-215ENST00000537304 FAM237AA0A1B0GTK4 181 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 CUTAO60888 179 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 DTNBO60941 627 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 PPP6R2O75170 966 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 CTDNEP1O95476 244 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 SYKP43405 635 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 WHAMMP3Q1A5X7 153 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 MAP9Q49MG5 647 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 BEND6Q5SZJ8 279 aaPredicted RBP12.41□□□□□ -0.42
LMO3-215ENST00000537304 AXDND1Q5T1B0 1012 aaPredicted RBP12.41□□□□□ -0.42
LMO3-215ENST00000537304 PANX2Q96RD6 677 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 MYO1AQ9UBC5 1043 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 MAP3K2Q9Y2U5 619 aa12.41□□□□□ -0.42
LMO3-215ENST00000537304 NWD1Q149M9 1564 aa12.4□□□□□ -0.42
LMO3-215ENST00000537304 EIF3CLB5ME19 914 aaKnown RBP12.4□□□□□ -0.42
LMO3-215ENST00000537304 TRIM66O15016 1216 aa12.4□□□□□ -0.42
LMO3-215ENST00000537304 PPFIA4O75335 1185 aa12.4□□□□□ -0.42
LMO3-215ENST00000537304 PFKFB1P16118 471 aa12.4□□□□□ -0.42
LMO3-215ENST00000537304 ATP2B1P20020 1258 aa12.4□□□□□ -0.42
LMO3-215ENST00000537304 SWT1Q5T5J6 900 aaKnown RBP12.4□□□□□ -0.42
LMO3-215ENST00000537304 MYSM1Q5VVJ2 828 aa12.4□□□□□ -0.42
LMO3-215ENST00000537304 ANO1Q5XXA6 986 aa12.4□□□□□ -0.42
LMO3-215ENST00000537304 RPAINQ86UA6 219 aa12.4□□□□□ -0.42
LMO3-215ENST00000537304 TMEM139Q8IV31 216 aa12.4□□□□□ -0.42
LMO3-215ENST00000537304 FBXW7Q969H0 707 aa12.4□□□□□ -0.42
LMO3-215ENST00000537304 EIF3CQ99613 913 aaKnown RBP12.4□□□□□ -0.42
LMO3-215ENST00000537304 FTOQ9C0B1 505 aaKnown RBP eCLIP12.4□□□□□ -0.42
LMO3-215ENST00000537304 PA2G4Q9UQ80 394 aaKnown RBP12.4□□□□□ -0.42
LMO3-215ENST00000537304 PALLDQ8WX93 1383 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 A0A087WUV0 522 aaPredicted RBP12.39□□□□□ -0.43
LMO3-215ENST00000537304 H3BQF6 201 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 PDIA3P30101 505 aaKnown RBP12.39□□□□□ -0.43
LMO3-215ENST00000537304 TEFQ10587 303 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 SLC39A14Q15043 492 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 DNAJC21Q5F1R6 531 aaKnown RBP12.39□□□□□ -0.43
LMO3-215ENST00000537304 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
LMO3-215ENST00000537304 ARHGEF25Q86VW2 580 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 DHX58Q96C10 678 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 CCDC51Q96ER9 411 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 HAUS7Q99871 368 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 SIL1Q9H173 461 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 PDE11AQ9HCR9 933 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 LCMT1Q9UIC8 334 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 L1RE1Q9UN81 338 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 TAF6LQ9Y6J9 622 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 NEDD4P46934 1319 aa12.39□□□□□ -0.43
LMO3-215ENST00000537304 A6NNZ2 444 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 BIN1O00499 593 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 HOXC9P31274 260 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 NEXNQ0ZGT2 675 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
LMO3-215ENST00000537304 TUBB8Q3ZCM7 444 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 MMS22LQ6ZRQ5 1243 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 TRIML1Q8N9V2 468 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 MLKLQ8NB16 471 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
LMO3-215ENST00000537304 WDR24Q96S15 920 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 CEP89Q96ST8 783 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 TACO1Q9BSH4 297 aaKnown RBP12.38□□□□□ -0.43
LMO3-215ENST00000537304 LMO7Q8WWI1 1683 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 ZNF609O15014 1411 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 CTAGE9A4FU28 777 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 MCM6Q14566 821 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 CCDC102BQ68D86 513 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 NUTM2AQ8IVF1 878 aaPredicted RBP12.38□□□□□ -0.43
LMO3-215ENST00000537304 KBTBD3Q8NAB2 608 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 SUCLG2Q96I99 432 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 BICC1Q9H694 974 aaKnown RBP12.38□□□□□ -0.43
LMO3-215ENST00000537304 COPRSQ9NQ92 184 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 TTF2Q9UNY4 1162 aaKnown RBP12.38□□□□□ -0.43
LMO3-215ENST00000537304 HPSEQ9Y251 543 aa12.38□□□□□ -0.43
LMO3-215ENST00000537304 LAMA4Q16363 1823 aa12.37□□□□□ -0.43
LMO3-215ENST00000537304 COL15A1P39059 1388 aa12.37□□□□□ -0.43
LMO3-215ENST00000537304 CTAGE15A4D2H0 777 aa12.37□□□□□ -0.43
LMO3-215ENST00000537304 AKR1B15C9JRZ8 316 aaPredicted RBP12.37□□□□□ -0.43
LMO3-215ENST00000537304 WDHD1O75717 1129 aaPredicted RBP12.37□□□□□ -0.43
LMO3-215ENST00000537304 CDKL5O76039 1030 aa12.37□□□□□ -0.43
LMO3-215ENST00000537304 CTAGE8P0CG41 777 aa12.37□□□□□ -0.43
LMO3-215ENST00000537304 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
LMO3-215ENST00000537304 ATP1A3P13637 1013 aa12.37□□□□□ -0.43
LMO3-215ENST00000537304 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.43
LMO3-215ENST00000537304 MCTP2Q6DN12 878 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms