RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 DHX58Q96C10 678 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 UTP14AQ9BVJ6 771 aaKnown RBP7.99□□□□□ -1.13
CPSF7-215ENST00000536145 LRRC2Q9BYS8 371 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 C19orf44Q9H6X5 657 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 BRMS1Q9HCU9 246 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 DBNLQ9UJU6 430 aaKnown RBP7.99□□□□□ -1.13
CPSF7-215ENST00000536145 L1RE1Q9UN81 338 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 PHRF1Q9P1Y6 1649 aaKnown RBP7.99□□□□□ -1.13
CPSF7-215ENST00000536145 NFAT5O94916 1531 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-215ENST00000536145 A0A1B0GUL7 405 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 KIF28PB7ZC32 967 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 POTEB2H3BUK9 544 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 STX10O60499 249 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 CHGBP05060 677 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 IGKV5-2P06315 115 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 ZNF18P17022 549 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 FOSBP53539 338 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 GYS2P54840 703 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 UBASH3AP57075 661 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 CORO7P57737 925 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 GUCY1B3Q02153 619 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 KIF23Q02241 960 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-215ENST00000536145 GOLGA8FQ08AF8 430 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 GOLGA8DPQ0D2H9 430 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 TUBB2AQ13885 445 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 SLC39A14Q15043 492 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 PDIA6Q15084 440 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 STK38Q15208 465 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 PTPAQ15257 358 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 RABL6Q3YEC7 729 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-215ENST00000536145 TNNI3KQ59H18 835 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 ZMYM1Q5SVZ6 1142 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 ANO1Q5XXA6 986 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 BRAPQ7Z569 592 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 SRGAP1Q7Z6B7 1085 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 C10orf67Q8IYJ2 551 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 KBTBD3Q8NAB2 608 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 CCDC34Q96HJ3 373 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 TUBB2BQ9BVA1 445 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 NCOA5Q9HCD5 579 aaKnown RBP7.98□□□□□ -1.13
CPSF7-215ENST00000536145 HELLSQ9NRZ9 838 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 GEMIN8Q9NWZ8 242 aaKnown RBP7.98□□□□□ -1.13
CPSF7-215ENST00000536145 C9orf78Q9NZ63 289 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-215ENST00000536145 FPGT-TNNI3KV9GXZ4 949 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 CAMTA1Q9Y6Y1 1673 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 MAP3K15Q6ZN16 1313 aa7.98□□□□□ -1.13
CPSF7-215ENST00000536145 A0A0G2JLW4 131 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 E7EWF7 191 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 BIN1O00499 593 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 RNMTO43148 476 aaKnown RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 PPP6R2O75170 966 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 TOP1P11387 765 aaKnown RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 BMP6P22004 513 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 LMAN1P49257 510 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 HDGFP51858 240 aaKnown RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 GNG11P61952 73 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 CCT2P78371 535 aaKnown RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 MDM2Q00987 491 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 PDE4BQ07343 736 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 FOXR1Q6PIV2 292 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 SHC4Q6S5L8 630 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 LRRC31Q6UY01 552 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 TOGARAM2Q6ZUX3 1019 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 HDXQ7Z353 690 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 PACS2Q86VP3 889 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 FOXP4Q8IVH2 680 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 SUGP1Q8IWZ8 645 aaKnown RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 ANKRD24Q8TF21 1146 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 FBXW7Q969H0 707 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 PNKPQ96T60 521 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 BAG1Q99933 345 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 SIL1Q9H173 461 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 MRPL44Q9H9J2 332 aaKnown RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 MKRN1Q9UHC7 482 aaKnown RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 CDC23Q9UJX2 597 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 HPS5Q9UPZ3 1129 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 NWD2Q9ULI1 1742 aa7.97□□□□□ -1.13
CPSF7-215ENST00000536145 ZC3H4Q9UPT8 1303 aaKnown RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 RGPD8O14715 1765 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-215ENST00000536145 SPEF2Q9C093 1822 aa7.96□□□□□ -1.13
CPSF7-215ENST00000536145 PXDNQ92626 1479 aa7.96□□□□□ -1.13
CPSF7-215ENST00000536145 KDM4FA0A1W2PPD8 638 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 SOX12O15370 315 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 PBX1P40424 430 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 SARSP49591 514 aaKnown RBP7.96□□□□□ -1.14
CPSF7-215ENST00000536145 MMP14P50281 582 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 TUBB4BP68371 445 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 PTPN12Q05209 780 aaKnown RBP7.96□□□□□ -1.14
CPSF7-215ENST00000536145 AKAP4Q5JQC9 854 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 SWT1Q5T5J6 900 aaKnown RBP7.96□□□□□ -1.14
CPSF7-215ENST00000536145 RESP18Q5W5W9 173 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 OTUD7BQ6GQQ9 843 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 APTXQ7Z2E3 356 aaKnown RBP7.96□□□□□ -1.14
CPSF7-215ENST00000536145 METTL16Q86W50 562 aaKnown RBP7.96□□□□□ -1.14
CPSF7-215ENST00000536145 CEP112Q8N8E3 955 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 FAM71BQ8TC56 605 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 IP6K1Q92551 441 aa7.96□□□□□ -1.14
CPSF7-215ENST00000536145 MED15Q96RN5 788 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms