RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PGBD1Q96JS3 809 aa15.69■□□□□ 0.1
VPS33B-202ENST00000535906 KIF3AQ9Y496 699 aa15.69■□□□□ 0.1
VPS33B-202ENST00000535906 CARMIL3Q8ND23 1372 aa15.69■□□□□ 0.1
VPS33B-202ENST00000535906 WTIPA6NIX2 430 aaPredicted RBP15.69■□□□□ 0.1
VPS33B-202ENST00000535906 GUCY1B3Q02153 619 aa15.69■□□□□ 0.1
VPS33B-202ENST00000535906 WDR19Q8NEZ3 1342 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 GOLGA6L4A6NEF3 574 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 GOLGA8BA8MQT2 603 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 TPM2P07951 284 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 TRDNQ13061 729 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 CYB5R4Q7L1T6 521 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 CDC5LQ99459 802 aaKnown RBP15.68■□□□□ 0.1
VPS33B-202ENST00000535906 BCL2L12Q9HB09 334 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 EPB41L4AQ9HCS5 686 aaPredicted RBP15.68■□□□□ 0.1
VPS33B-202ENST00000535906 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 PATL2C9JE40 543 aaKnown RBP15.68■□□□□ 0.1
VPS33B-202ENST00000535906 MBD4O95243 580 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 CEBPZQ03701 1054 aaKnown RBP15.68■□□□□ 0.1
VPS33B-202ENST00000535906 TBC1D9BQ66K14 1250 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 FNBP4Q8N3X1 1017 aaPredicted RBP15.68■□□□□ 0.1
VPS33B-202ENST00000535906 CHMP4CQ96CF2 233 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 ARMT1Q9H993 441 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 DACT1Q9NYF0 836 aa15.68■□□□□ 0.1
VPS33B-202ENST00000535906 SF3B3Q15393 1217 aaKnown RBP15.67■□□□□ 0.1
VPS33B-202ENST00000535906 CAMK4Q16566 473 aa15.67■□□□□ 0.1
VPS33B-202ENST00000535906 FAM182BQ5T319 152 aa15.67■□□□□ 0.1
VPS33B-202ENST00000535906 IFNL3Q8IZI9 196 aa15.67■□□□□ 0.1
VPS33B-202ENST00000535906 FTOQ9C0B1 505 aaKnown RBP eCLIP15.67■□□□□ 0.1
VPS33B-202ENST00000535906 INCENPQ9NQS7 918 aa15.67■□□□□ 0.1
VPS33B-202ENST00000535906 CFAP45Q9UL16 551 aa15.67■□□□□ 0.1
VPS33B-202ENST00000535906 IQSEC3Q9UPP2 1182 aaPredicted RBP15.67■□□□□ 0.1
VPS33B-202ENST00000535906 MYH15Q9Y2K3 1946 aa15.67■□□□□ 0.1
VPS33B-202ENST00000535906 B4E1Z4 1266 aa15.67■□□□□ 0.1
VPS33B-202ENST00000535906 PTMAP06454 111 aaKnown RBP15.67■□□□□ 0.1
VPS33B-202ENST00000535906 ALX1Q15699 326 aa15.67■□□□□ 0.1
VPS33B-202ENST00000535906 ANKRD18AQ8IVF6 992 aa15.67■□□□□ 0.1
VPS33B-202ENST00000535906 USP25Q9UHP3 1055 aa15.67■□□□□ 0.1
VPS33B-202ENST00000535906 NEDD4P46934 1319 aa15.66■□□□□ 0.1
VPS33B-202ENST00000535906 TERF1P54274 439 aa15.66■□□□□ 0.1
VPS33B-202ENST00000535906 ILDR1Q86SU0 546 aaPredicted RBP15.66■□□□□ 0.1
VPS33B-202ENST00000535906 NUP62CLQ9H1M0 184 aa15.66■□□□□ 0.1
VPS33B-202ENST00000535906 CASZ1Q86V15 1759 aa15.66■□□□□ 0.1
VPS33B-202ENST00000535906 GSG1L2A8MUP6 293 aa15.66■□□□□ 0.1
VPS33B-202ENST00000535906 DHX16O60231 1041 aaKnown RBP15.66■□□□□ 0.1
VPS33B-202ENST00000535906 SRP68Q9UHB9 627 aaKnown RBP15.66■□□□□ 0.1
VPS33B-202ENST00000535906 ANGEL1Q9UNK9 670 aaKnown RBP15.66■□□□□ 0.1
VPS33B-202ENST00000535906 PRKAB2O43741 272 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 NR1I2O75469 434 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 GYG1P46976 350 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 OTUD7BQ6GQQ9 843 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 LCORLQ8N3X6 602 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 NAPBQ9H115 298 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 SENP2Q9HC62 589 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 BSDC1Q9NW68 430 aaPredicted RBP15.65■□□□□ 0.1
VPS33B-202ENST00000535906 TACC3Q9Y6A5 838 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 ZMYM6O95789 1325 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 SH2B2O14492 632 aaPredicted RBP15.65■□□□□ 0.1
VPS33B-202ENST00000535906 GTF2E1P29083 439 aaPredicted RBP15.65■□□□□ 0.1
VPS33B-202ENST00000535906 CTDSPL2Q05D32 466 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 BICD2Q8TD16 824 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 CELF1Q92879 486 aaKnown RBP15.65■□□□□ 0.1
VPS33B-202ENST00000535906 USP28Q96RU2 1077 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 LRP2BPQ9P2M1 347 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 USP21Q9UK80 565 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 RCOR1Q9UKL0 485 aa15.65■□□□□ 0.1
VPS33B-202ENST00000535906 ZNF804BA4D1E1 1349 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 CPLX1O14810 134 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 KDM4AO75164 1064 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 ADCY5O95622 1261 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 MAP3K11Q16584 847 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 ORC3Q9UBD5 711 aaPredicted RBP15.64■□□□□ 0.09
VPS33B-202ENST00000535906 NARFQ9UHQ1 456 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 MINPP1Q9UNW1 487 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 BTAF1O14981 1849 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 RPS6KA4O75676 772 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 SLC10A5Q5PT55 438 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 RC3H1Q5TC82 1133 aaKnown RBP15.64■□□□□ 0.09
VPS33B-202ENST00000535906 AMIGO3Q86WK7 504 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 MIGA1Q8NAN2 632 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 IGDCC4Q8TDY8 1250 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 TNMDQ9H2S6 317 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 GJB4Q9NTQ9 266 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.64■□□□□ 0.09
VPS33B-202ENST00000535906 SCN7AQ01118 1682 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 A0A1B0GUL6 1792 aa15.64■□□□□ 0.09
VPS33B-202ENST00000535906 GNPATO15228 680 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 CCDC192P0DO97 292 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 RXRAP19793 462 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 UBE4AQ14139 1066 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 ADGRA1Q86SQ6 560 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 CKAP2LQ8IYA6 745 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 C8orf76Q96K31 380 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 DDX19AQ9NUU7 478 aaKnown RBP15.63■□□□□ 0.09
VPS33B-202ENST00000535906 ZSWIM5Q9P217 1185 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 C4AP0C0L4 1744 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 C4BP0C0L5 1744 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 PNPLA7Q6ZV29 1317 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 APOA5Q6Q788 366 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 FBXO18Q8NFZ0 1043 aa15.63■□□□□ 0.09
VPS33B-202ENST00000535906 ABCF2Q9UG63 623 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms