RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 ZNF652Q9Y2D9 606 aa22.61■■□□□ 1.21
UBXN1-215ENST00000533476 SPATA31A6Q5VVP1 1343 aa22.6■■□□□ 1.21
UBXN1-215ENST00000533476 IGHMBP2P38935 993 aaKnown RBP22.6■■□□□ 1.21
UBXN1-215ENST00000533476 FOSBP53539 338 aa22.6■■□□□ 1.21
UBXN1-215ENST00000533476 TRDNQ13061 729 aa22.6■■□□□ 1.21
UBXN1-215ENST00000533476 TBC1D10CQ8IV04 446 aa22.6■■□□□ 1.21
UBXN1-215ENST00000533476 BICD2Q8TD16 824 aa22.6■■□□□ 1.21
UBXN1-215ENST00000533476 ZNF396Q96N95 335 aaPredicted RBP22.6■■□□□ 1.21
UBXN1-215ENST00000533476 STRBPQ96SI9 672 aaKnown RBP22.6■■□□□ 1.21
UBXN1-215ENST00000533476 C4AP0C0L4 1744 aa22.6■■□□□ 1.21
UBXN1-215ENST00000533476 C4BP0C0L5 1744 aa22.6■■□□□ 1.21
UBXN1-215ENST00000533476 AIDAQ96BJ3 306 aa22.59■■□□□ 1.21
UBXN1-215ENST00000533476 KDM4AO75164 1064 aa22.59■■□□□ 1.21
UBXN1-215ENST00000533476 MAP3K12Q12852 859 aa22.59■■□□□ 1.21
UBXN1-215ENST00000533476 TYRO3Q06418 890 aa22.58■■□□□ 1.21
UBXN1-215ENST00000533476 CAMK4Q16566 473 aa22.58■■□□□ 1.21
UBXN1-215ENST00000533476 BCL9LQ86UU0 1499 aa22.57■■□□□ 1.2
UBXN1-215ENST00000533476 TIAM2Q8IVF5 1701 aa22.57■■□□□ 1.2
UBXN1-215ENST00000533476 NR1I2O75469 434 aa22.57■■□□□ 1.2
UBXN1-215ENST00000533476 ADCY5O95622 1261 aa22.57■■□□□ 1.2
UBXN1-215ENST00000533476 APPP05067 770 aa22.57■■□□□ 1.2
UBXN1-215ENST00000533476 PTMAP06454 111 aaKnown RBP22.57■■□□□ 1.2
UBXN1-215ENST00000533476 CLEC4GQ6UXB4 293 aa22.57■■□□□ 1.2
UBXN1-215ENST00000533476 RGS22Q8NE09 1264 aa22.57■■□□□ 1.2
UBXN1-215ENST00000533476 ANGEL1Q9UNK9 670 aaKnown RBP22.57■■□□□ 1.2
UBXN1-215ENST00000533476 MRVI1Q9Y6F6 885 aa22.57■■□□□ 1.2
UBXN1-215ENST00000533476 KCNQ2O43526 872 aa22.56■■□□□ 1.2
UBXN1-215ENST00000533476 MAGEB6Q8N7X4 407 aa22.56■■□□□ 1.2
UBXN1-215ENST00000533476 FAM200AQ8TCP9 573 aa22.56■■□□□ 1.2
UBXN1-215ENST00000533476 SNAP23O00161 211 aa22.55■■□□□ 1.2
UBXN1-215ENST00000533476 SH2B2O14492 632 aaPredicted RBP22.55■■□□□ 1.2
UBXN1-215ENST00000533476 USP28Q96RU2 1077 aa22.55■■□□□ 1.2
UBXN1-215ENST00000533476 A0A1B0GUL6 1792 aa22.55■■□□□ 1.2
UBXN1-215ENST00000533476 SCN7AQ01118 1682 aa22.55■■□□□ 1.2
UBXN1-215ENST00000533476 PATL2C9JE40 543 aaKnown RBP22.55■■□□□ 1.2
UBXN1-215ENST00000533476 CPLX1O14810 134 aa22.55■■□□□ 1.2
UBXN1-215ENST00000533476 PPFIA3O75145 1194 aa22.55■■□□□ 1.2
UBXN1-215ENST00000533476 GUCY1B3Q02153 619 aa22.55■■□□□ 1.2
UBXN1-215ENST00000533476 CYB5R4Q7L1T6 521 aa22.55■■□□□ 1.2
UBXN1-215ENST00000533476 NGLY1Q96IV0 654 aa22.55■■□□□ 1.2
UBXN1-215ENST00000533476 C8orf76Q96K31 380 aa22.55■■□□□ 1.2
UBXN1-215ENST00000533476 CDC5LQ99459 802 aaKnown RBP22.55■■□□□ 1.2
UBXN1-215ENST00000533476 ORC3Q9UBD5 711 aaPredicted RBP22.55■■□□□ 1.2
UBXN1-215ENST00000533476 RGL2O15211 777 aa22.54■■□□□ 1.2
UBXN1-215ENST00000533476 MBD4O95243 580 aa22.54■■□□□ 1.2
UBXN1-215ENST00000533476 CEBPZQ03701 1054 aaKnown RBP22.54■■□□□ 1.2
UBXN1-215ENST00000533476 CHRNDQ07001 517 aa22.54■■□□□ 1.2
UBXN1-215ENST00000533476 CKAP2LQ8IYA6 745 aa22.54■■□□□ 1.2
UBXN1-215ENST00000533476 TMEM87BQ96K49 555 aa22.54■■□□□ 1.2
UBXN1-215ENST00000533476 FTOQ9C0B1 505 aaKnown RBP eCLIP22.54■■□□□ 1.2
UBXN1-215ENST00000533476 EPB41L4AQ9HCS5 686 aaPredicted RBP22.54■■□□□ 1.2
UBXN1-215ENST00000533476 COL4A1P02462 1669 aa22.54■■□□□ 1.2
UBXN1-215ENST00000533476 CHD4Q14839 1912 aa22.54■■□□□ 1.2
UBXN1-215ENST00000533476 LINC00116Q8NCU8 138 aa22.53■■□□□ 1.2
UBXN1-215ENST00000533476 FBXO18Q8NFZ0 1043 aa22.53■■□□□ 1.2
UBXN1-215ENST00000533476 DENND2AQ9ULE3 1009 aa22.53■■□□□ 1.2
UBXN1-215ENST00000533476 BCAMP50895 628 aa22.53■■□□□ 1.2
UBXN1-215ENST00000533476 IFNL3Q8IZI9 196 aa22.53■■□□□ 1.2
UBXN1-215ENST00000533476 NEDD4P46934 1319 aa22.52■■□□□ 1.2
UBXN1-215ENST00000533476 PNPLA7Q6ZV29 1317 aa22.52■■□□□ 1.2
UBXN1-215ENST00000533476 CASZ1Q86V15 1759 aa22.52■■□□□ 1.2
UBXN1-215ENST00000533476 NAPBQ9H115 298 aa22.52■■□□□ 1.2
UBXN1-215ENST00000533476 RTEL1Q9NZ71 1219 aa22.52■■□□□ 1.2
UBXN1-215ENST00000533476 B4E1Z4 1266 aa22.51■■□□□ 1.19
UBXN1-215ENST00000533476 RRP9O43818 475 aaKnown RBP22.51■■□□□ 1.19
UBXN1-215ENST00000533476 GNAT2P19087 354 aa22.51■■□□□ 1.19
UBXN1-215ENST00000533476 CCAR1Q8IX12 1150 aaKnown RBP22.51■■□□□ 1.19
UBXN1-215ENST00000533476 NKX2-3Q8TAU0 364 aa22.51■■□□□ 1.19
UBXN1-215ENST00000533476 CNTNAP4Q9C0A0 1308 aa22.51■■□□□ 1.19
UBXN1-215ENST00000533476 BRAPQ7Z569 592 aa22.51■■□□□ 1.19
UBXN1-215ENST00000533476 RAB11FIP4Q86YS3 637 aa22.51■■□□□ 1.19
UBXN1-215ENST00000533476 ARMT1Q9H993 441 aa22.51■■□□□ 1.19
UBXN1-215ENST00000533476 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.51■■□□□ 1.19
UBXN1-215ENST00000533476 ZNF804BA4D1E1 1349 aa22.5■■□□□ 1.19
UBXN1-215ENST00000533476 GSG1L2A8MUP6 293 aa22.5■■□□□ 1.19
UBXN1-215ENST00000533476 CTAGE5O15320 804 aa22.5■■□□□ 1.19
UBXN1-215ENST00000533476 CDKL5O76039 1030 aa22.5■■□□□ 1.19
UBXN1-215ENST00000533476 METAP2P50579 478 aaKnown RBP eCLIP22.5■■□□□ 1.19
UBXN1-215ENST00000533476 SF3B3Q15393 1217 aaKnown RBP22.5■■□□□ 1.19
UBXN1-215ENST00000533476 FAM98CQ17RN3 349 aaKnown RBP22.5■■□□□ 1.19
UBXN1-215ENST00000533476 ANO6Q4KMQ2 910 aa22.5■■□□□ 1.19
UBXN1-215ENST00000533476 APOA5Q6Q788 366 aa22.5■■□□□ 1.19
UBXN1-215ENST00000533476 SASS6Q6UVJ0 657 aa22.5■■□□□ 1.19
UBXN1-215ENST00000533476 ERFEQ4G0M1 354 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 CCDC73Q6ZRK6 1079 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 SGMS1Q86VZ5 419 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 IGDCC4Q8TDY8 1250 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 GOLPH3LQ9H4A5 285 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 CNNM2Q9H8M5 875 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 AP5Z1O43299 807 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 VPS72Q15906 364 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 OTUD7BQ6GQQ9 843 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 ANKRD18AQ8IVF6 992 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 LY9Q9HBG7 655 aa22.49■■□□□ 1.19
UBXN1-215ENST00000533476 CAVIN2O95810 425 aa22.48■■□□□ 1.19
UBXN1-215ENST00000533476 FAM160A1Q05DH4 1040 aa22.48■■□□□ 1.19
UBXN1-215ENST00000533476 NACAP1Q9BZK3 213 aa22.48■■□□□ 1.19
UBXN1-215ENST00000533476 CBX8Q9HC52 389 aa22.48■■□□□ 1.19
UBXN1-215ENST00000533476 POLR3EQ9NVU0 708 aa22.48■■□□□ 1.19
UBXN1-215ENST00000533476 LIFRP42702 1097 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms